Chain A from PDB Type:PROTEIN Length:137
aligned with TNF13_MOUSE | Q9D777 from UniProtKB/Swiss-Prot Length:241
Alignment length:137
114 124 134 144 154 164 174 184 194 204 214 224 234
TNF13_MOUSE 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
SCOP domains d1xu2a_ A: A proliferation-inducing ligand, APRIL SCOP domains
CATH domains 1xu2A00 A:105-241 [code=2.60.120.40, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeeeee.......eeeeeeeeeee...eeee..eeee...eeeeeeeeeeee....eeeeeeeee....eeeeeeeeee...hhhh.eeeeeeeeeeee....eeeeee..............eeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---TNF_2 PDB: A:108-241 UniProt: 108-241 PROSITE (1)
PROSITE (2) -----------------------------------------TNF_1 ------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
1xu2 A 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
114 124 134 144 154 164 174 184 194 204 214 224 234
Chain B from PDB Type:PROTEIN Length:137
aligned with TNF13_MOUSE | Q9D777 from UniProtKB/Swiss-Prot Length:241
Alignment length:137
114 124 134 144 154 164 174 184 194 204 214 224 234
TNF13_MOUSE 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
SCOP domains d1xu2b_ B: A proliferation-inducing ligand, APRIL SCOP domains
CATH domains 1xu2B00 B:105-241 [code=2.60.120.40, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeeeee.......eeeeeeeeeee...eeee..eeee...eeeeeeeeeee.....eeeeeeeee....eeeeeeeeee.........eeeeeeeeeee....eeeeee..............eeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---TNF_2 PDB: B:108-241 UniProt: 108-241 PROSITE (1)
PROSITE (2) -----------------------------------------TNF_1 ------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
1xu2 B 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
114 124 134 144 154 164 174 184 194 204 214 224 234
Chain D from PDB Type:PROTEIN Length:137
aligned with TNF13_MOUSE | Q9D777 from UniProtKB/Swiss-Prot Length:241
Alignment length:137
114 124 134 144 154 164 174 184 194 204 214 224 234
TNF13_MOUSE 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
SCOP domains d1xu2d_ D: A proliferation-inducing ligand, APRIL SCOP domains
CATH domains 1xu2D00 D:105-241 [code=2.60.120.40, no name defined] CATH domains
Pfam domains (1) ------------------------TNF-1xu2D01 D:129-241 Pfam domains (1)
Pfam domains (2) ------------------------TNF-1xu2D02 D:129-241 Pfam domains (2)
Pfam domains (3) ------------------------TNF-1xu2D03 D:129-241 Pfam domains (3)
Sec.struct. author ...eeeeeeeeee.......eeeeeeeeeee...eeee..eeee...eeeeeeeeeeee....eeeeeeeee....eeeeeeeeee........eeeeeeeeeeee....eeeeee..............eeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---TNF_2 PDB: D:108-241 UniProt: 108-241 PROSITE (1)
PROSITE (2) -----------------------------------------TNF_1 ------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
1xu2 D 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
114 124 134 144 154 164 174 184 194 204 214 224 234
Chain R from PDB Type:PROTEIN Length:36
aligned with TNR17_HUMAN | Q02223 from UniProtKB/Swiss-Prot Length:184
Alignment length:36
17 27 37
TNR17_HUMAN 8 CSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCNA 43
SCOP domains d1xu2r_ R: SCOP domains
CATH domains ------------------------------------ CATH domains
Pfam domains ------------------------------------ Pfam domains
Sec.struct. author ....eeee....eeee.hhh......hhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------ PROSITE
Transcript 1 Exon 1.1 PDB: R:8-43 UniProt: 1-44 Transcript 1
1xu2 R 8 CSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCNA 43
17 27 37
Chain S from PDB Type:PROTEIN Length:37
aligned with TNR17_HUMAN | Q02223 from UniProtKB/Swiss-Prot Length:184
Alignment length:37
15 25 35
TNR17_HUMAN 6 GQCSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCN 42
SCOP domains d1xu2s_ S: SCOP domains
CATH domains ------------------------------------- CATH domains
Pfam domains ------------------------------------- Pfam domains
Sec.struct. author ......eeee....eeee.hhhh........hhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: S:6-42 UniProt: 1-44 Transcript 1
1xu2 S 6 GQCSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCN 42
15 25 35
Chain T from PDB Type:PROTEIN Length:35
aligned with TNR17_HUMAN | Q02223 from UniProtKB/Swiss-Prot Length:184
Alignment length:35
17 27 37
TNR17_HUMAN 8 CSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCN 42
SCOP domains d1xu2t_ T: SCOP domains
CATH domains ----------------------------------- CATH domains
Pfam domains (1) BCMA-Tall_bind-1xu2T01 T:8-42 Pfam domains (1)
Pfam domains (2) BCMA-Tall_bind-1xu2T02 T:8-42 Pfam domains (2)
Pfam domains (3) BCMA-Tall_bind-1xu2T03 T:8-42 Pfam domains (3)
Sec.struct. author ....eeee....eeee.hhhh.............. Sec.struct. author
SAPs(SNPs) ----------------------------------- SAPs(SNPs)
PROSITE ----------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: T:8-42 UniProt: 1-44 Transcript 1
1xu2 T 8 CSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCN 42
17 27 37
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |