Chain A from PDB Type:PROTEIN Length:137
aligned with TNF13_MOUSE | Q9D777 from UniProtKB/Swiss-Prot Length:241
Alignment length:137
114 124 134 144 154 164 174 184 194 204 214 224 234
TNF13_MOUSE 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
SCOP domains d1xu1a_ A: A proliferation-inducing ligand, APRIL SCOP domains
CATH domains 1xu1A00 A:105-241 [code=2.60.120.40, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeeeee.......eeeeeeeeeee...eeee..eeee...eeeeeeeeeeee....eeeeeeeeee..eeeeeeeeeee........eeeeeeeeeeee....eeeeee..............eeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---TNF_2 PDB: A:108-241 UniProt: 108-241 PROSITE (1)
PROSITE (2) -----------------------------------------TNF_1 ------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
1xu1 A 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
114 124 134 144 154 164 174 184 194 204 214 224 234
Chain B from PDB Type:PROTEIN Length:137
aligned with TNF13_MOUSE | Q9D777 from UniProtKB/Swiss-Prot Length:241
Alignment length:137
114 124 134 144 154 164 174 184 194 204 214 224 234
TNF13_MOUSE 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
SCOP domains d1xu1b_ B: A proliferation-inducing ligand, APRIL SCOP domains
CATH domains 1xu1B00 B:105-241 [code=2.60.120.40, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeeeee.......eeeeeeeeeee...eeee..eeee...eeeeeeeeeeee....eeeeeeeeee..eeeeeeeeeee...hhhh.eeeeeeeeeeee....eeeeee..............eeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---TNF_2 PDB: B:108-241 UniProt: 108-241 PROSITE (1)
PROSITE (2) -----------------------------------------TNF_1 ------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
1xu1 B 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
114 124 134 144 154 164 174 184 194 204 214 224 234
Chain D from PDB Type:PROTEIN Length:137
aligned with TNF13_MOUSE | Q9D777 from UniProtKB/Swiss-Prot Length:241
Alignment length:137
114 124 134 144 154 164 174 184 194 204 214 224 234
TNF13_MOUSE 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
SCOP domains d1xu1d_ D: A proliferation-inducing ligand, APRIL SCOP domains
CATH domains 1xu1D00 D:105-241 [code=2.60.120.40, no name defined] CATH domains
Pfam domains (1) ------------------------TNF-1xu1D01 D:129-241 Pfam domains (1)
Pfam domains (2) ------------------------TNF-1xu1D02 D:129-241 Pfam domains (2)
Pfam domains (3) ------------------------TNF-1xu1D03 D:129-241 Pfam domains (3)
Sec.struct. author ...eeeeeeeeee.......eeeeeeeeeee...eeee..eeee...eeeeeeeeeeee....eeeeeeeee....eeeeeeeeee........eeeeeeeeeeee....eeeeee..............eeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---TNF_2 PDB: D:108-241 UniProt: 108-241 PROSITE (1)
PROSITE (2) -----------------------------------------TNF_1 ------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
1xu1 D 105 KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL 241
114 124 134 144 154 164 174 184 194 204 214 224 234
Chain R from PDB Type:PROTEIN Length:38
aligned with TR13B_HUMAN | O14836 from UniProtKB/Swiss-Prot Length:293
Alignment length:38
77 87 97
TR13B_HUMAN 68 SLSCRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCE 105
SCOP domains d1xu1r_ R: SCOP domains
CATH domains -------------------------------------- CATH domains
Pfam domains -------------------------------------- Pfam domains
Sec.struct. author ....hhhh.eeee....eeee.hhhh...hhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------R- SAPs(SNPs)
PROSITE -------------------------------------- PROSITE
Transcript 1 Exon 1.3 PDB: R:68-105 [INCOMPLETE] Transcript 1
1xu1 R 68 SLSCRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCE 105
77 87 97
Chain S from PDB Type:PROTEIN Length:36
aligned with TR13B_HUMAN | O14836 from UniProtKB/Swiss-Prot Length:293
Alignment length:36
80 90 100
TR13B_HUMAN 71 CRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCEN 106
SCOP domains d1xu1s_ S: SCOP domains
CATH domains ------------------------------------ CATH domains
Pfam domains ------------------------------------ Pfam domains
Sec.struct. author .hhhh.eeee....eeeehhhhh...hhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------R-- SAPs(SNPs)
PROSITE ------------------------------------ PROSITE
Transcript 1 Exon 1.3 PDB: S:71-106 [INCOMPLETE] Transcript 1
1xu1 S 71 CRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCEN 106
80 90 100
Chain T from PDB Type:PROTEIN Length:39
aligned with TR13B_HUMAN | O14836 from UniProtKB/Swiss-Prot Length:293
Alignment length:39
80 90 100
TR13B_HUMAN 71 CRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCENKLR 109
SCOP domains d1xu1t_ T: SCOP domains
CATH domains --------------------------------------- CATH domains
Pfam domains (1) TACI-CRD2-1xu1T01 T:71-109 Pfam domains (1)
Pfam domains (2) TACI-CRD2-1xu1T02 T:71-109 Pfam domains (2)
Pfam domains (3) TACI-CRD2-1xu1T03 T:71-109 Pfam domains (3)
Sec.struct. author .hhhh.eeee....eeee.hhh....hhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------R----- SAPs(SNPs)
PROSITE --------------------------------------- PROSITE
Transcript 1 Exon 1.3 PDB: T:71-109 UniProt: 67-149 Transcript 1
1xu1 T 71 CRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCENKLR 109
80 90 100
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |