Chain A from PDB Type:PROTEIN Length:327
aligned with DPOLL_HUMAN | Q9UGP5 from UniProtKB/Swiss-Prot Length:575
Alignment length:327
258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568
DPOLL_HUMAN 249 ATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW 575
SCOP domains d1xsla1 A:249-327 DNA polymerase lambda -d1xsla2 A:329-385 DNA polymerase lambda d1xsla3 A:386-575 DNA polymerase lambda SCOP domains
CATH domains 1xslA01 A:249-331 [code=1.10.150.110, no name defined] 1xslA02 A:332-385 1xslA03 A:386-508 Beta Polymerase, domain 2 1xslA04 A:509-575 Beta Polymerase, domain 3 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh......hhhhhhhh...hhhhhhhhhhhhhhh.hhhhhh...hhhhhhhhhh....hhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhhhhhh.eehhhhhhhhhhhhhhhhh.....eeeehhhhhh...ee..eeeeee.........hhhhhhhhhhhh..eeeeeeeeeee..eeeeeeee.........eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee....eee....................hhhhhhhhh.....hhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------DNA_POLYMERASE_X -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.5e PDB: A:249-297 UniProt: 192-297 Exon 1.6b PDB: A:298-355 UniProt: 298-355 Exon 1.7b PDB: A:356-398 UniProt: 356-398 Exon 1.8c PDB: A:399-455 UniProt: 399-455 ------------------------------------------------------------------------------------------------------------------------ Transcript 1 (1)
Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9g PDB: A:455-575 UniProt: 455-575 Transcript 1 (2)
1xsl A 249 ATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW 575
258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568
Chain B from PDB Type:DNA Length:11
1xsl B 1 CGGCAGCGCAC 11
10
Chain C from PDB Type:DNA Length:6
1xsl C 1 GTGCGC 6
Chain D from PDB Type:DNA Length:4
1xsl D 1 GCCG 4
Chain E from PDB Type:PROTEIN Length:325
aligned with DPOLL_HUMAN | Q9UGP5 from UniProtKB/Swiss-Prot Length:575
Alignment length:325
260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570
DPOLL_HUMAN 251 NHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW 575
SCOP domains d1xsle1 E:251-327 DNA polymerase lambda -d1xsle2 E:329-385 DNA polymerase lambda d1xsle3 E:386-575 DNA polymerase lambda SCOP domains
CATH domains 1xslE01 E:251-331 [code=1.10.150.110, no name defined] 1xslE02 E:332-385 1xslE03 E:386-508 Beta Polymerase, domain 2 1xslE04 E:509-575 Beta Polymerase, domain 3 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh......hhhhhhh....hhhhhhhhhhhhhhh.hhhhhh...hhhhhhhhh.....hhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhhhhhh.eehhhhhhhhhhhhhhhhh.....eeeehhhhhh...ee..eeeeee.........hhhhhhhhhhhh..eeeeeeeeeee..eeeeeeee.........eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee....eee...............ee...hhhhhhhhhh....hhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------DNA_POLYMERASE_X -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.5e PDB: E:251-297 UniProt: 192-297 Exon 1.6b PDB: E:298-355 UniProt: 298-355 Exon 1.7b PDB: E:356-398 UniProt: 356-398 Exon 1.8c PDB: E:399-455 UniProt: 399-455 ------------------------------------------------------------------------------------------------------------------------ Transcript 1 (1)
Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9g PDB: E:455-575 UniProt: 455-575 Transcript 1 (2)
1xsl E 251 NHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW 575
260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570
Chain F from PDB Type:DNA Length:11
1xsl F 1 CGGCAGCGCAC 11
10
Chain G from PDB Type:DNA Length:6
1xsl G 1 GTGCGC 6
Chain H from PDB Type:DNA Length:4
1xsl H 1 GCCG 4
Chain I from PDB Type:PROTEIN Length:326
aligned with DPOLL_HUMAN | Q9UGP5 from UniProtKB/Swiss-Prot Length:575
Alignment length:326
259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499 509 519 529 539 549 559 569
DPOLL_HUMAN 250 TNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW 575
SCOP domains d1xsli1 I:250-327 DNA polymerase lambda -d1xsli2 I:329-385 DNA polymerase lambda d1xsli3 I:386-575 DNA polymerase lambda SCOP domains
CATH domains 1xslI01 I:250-331 [code=1.10.150.110, no name defined] 1xslI02 I:332-385 1xslI03 I:386-508 Beta Polymerase, domain 2 1xslI04 I:509-575 Beta Polymerase, domain 3 CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh......hhhhhhh....hhhhhhhhhhhhhhh.hhhhhhh..hhhhhhhhhh....hhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhhhhhh.eehhhhhhhhhhhhhhhh......eeeehhhhhh...ee..eeeeee........hhhhhhhhhhhhh..eeeeeeeeeee..eeeeeeee.........eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee....eee..ee.....eee...ee...hhhhhhhhh.....hhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------DNA_POLYMERASE_X -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.5e PDB: I:250-297 UniProt: 192-297 Exon 1.6b PDB: I:298-355 UniProt: 298-355 Exon 1.7b PDB: I:356-398 UniProt: 356-398 Exon 1.8c PDB: I:399-455 UniProt: 399-455 ------------------------------------------------------------------------------------------------------------------------ Transcript 1 (1)
Transcript 1 (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9g PDB: I:455-575 UniProt: 455-575 Transcript 1 (2)
1xsl I 250 TNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW 575
259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499 509 519 529 539 549 559 569
Chain J from PDB Type:DNA Length:11
1xsl J 1 CGGCAGCGCAC 11
10
Chain K from PDB Type:DNA Length:6
1xsl K 1 GTGCGC 6
Chain L from PDB Type:DNA Length:4
1xsl L 1 GCCG 4
Chain M from PDB Type:PROTEIN Length:327
aligned with DPOLL_HUMAN | Q9UGP5 from UniProtKB/Swiss-Prot Length:575
Alignment length:327
258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568
DPOLL_HUMAN 249 ATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW 575
SCOP domains d1xslm1 M:249-327 DNA polymerase lambda -d1xslm2 M:329-385 DNA polymerase lambda d1xslm3 M:386-575 DNA polymerase lambda SCOP domains
CATH domains 1xslM01 M:249-331 [code=1.10.150.110, no name defined] 1xslM02 M:332-385 1xslM03 M:386-508 Beta Polymerase, domain 2 1xslM04 M:509-575 Beta Polymerase, domain 3 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.....hhhhhhhh...hhhhhhhhhhhhhhh.hhhhhh...hhhhhhhhhh....hhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhhhhhh.eehhhhhhhhhhhhhhhhh.....eeeehhhhhh...ee..eeeeee.........hhhhhhhhhhhh..eeeeeeeeeee..eeeeeeee.........eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee....eee..ee.....eee...ee...hhhhhhhhh.....hhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------DNA_POLYMERASE_X -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.5e PDB: M:249-297 UniProt: 192-297 Exon 1.6b PDB: M:298-355 UniProt: 298-355 Exon 1.7b PDB: M:356-398 UniProt: 356-398 Exon 1.8c PDB: M:399-455 UniProt: 399-455 ------------------------------------------------------------------------------------------------------------------------ Transcript 1 (1)
Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9g PDB: M:455-575 UniProt: 455-575 Transcript 1 (2)
1xsl M 249 ATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW 575
258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568
Chain N from PDB Type:DNA Length:11
1xsl N 1 CGGCAGCGCAC 11
10
Chain O from PDB Type:DNA Length:6
1xsl O 1 GTGCGC 6
Chain P from PDB Type:DNA Length:4
1xsl P 1 GCCG 4
Legend: |
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(green background, '-', border residues have a numbering label) |
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |