Chain A from PDB Type:PROTEIN Length:152
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:153
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
RNH_ECOLI 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVE 154
SCOP domains d1wsia_ A: RNase H (RNase HI) SCOP domains
CATH domains 1wsiA00 A:2-154 [code=3.30.420.10, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh..eeeeee...-..hhhhhhhhhhhhhhhh............ Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsi A 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKG-AGHPENERCNELARAAAMNPTLEDTGYQVE 154
11 21 31 41 51 61 71 81 91 101 111 121 | | 131 141 151
123 |
125
Chain B from PDB Type:PROTEIN Length:149
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:152
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
RNH_ECOLI 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQV 153
SCOP domains d1wsib_ B: RNase H (RNase HI) SCOP domains
CATH domains 1wsiB00 B:2-153 [code=3.30.420.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh..eeeeee...---hhhhhhhhhhhhhhhh........... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsi B 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKG---HPENERCNELARAAAMNPTLEDTGYQV 153
11 21 31 41 51 61 71 81 91 101 111 121 | | 131 141 151
123 127
Chain C from PDB Type:PROTEIN Length:153
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:154
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
RNH_ECOLI 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV 155
SCOP domains d1wsic_ C: RNase H (RNase HI) SCOP domains
CATH domains 1wsiC00 C:2-155 [code=3.30.420.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhh..eeeeee...-..hhhhhhhhhhhhhhhh............. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsi C 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKG-AGHPENERCNELARAAAMNPTLEDTGYQVEV 155
11 21 31 41 51 61 71 81 91 101 111 121 | | 131 141 151
123 |
125
Chain D from PDB Type:PROTEIN Length:152
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:154
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
RNH_ECOLI 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV 155
SCOP domains d1wsid_ D: RNase H (RNase HI) SCOP domains
CATH domains 1wsiD00 D:2-155 [code=3.30.420.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhh.eeeeee...--.hhhhhhhhhhhhhhhh............. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsi D 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKG--GHPENERCNELARAAAMNPTLEDTGYQVEV 155
11 21 31 41 51 61 71 81 91 101 111 121 | | 131 141 151
123 |
126
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |