Chain A from PDB Type:PROTEIN Length:155
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:155
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
RNH_ECOLI 1 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV 155
SCOP domains d1wsga1 A:1-155 RNase H (RNase HI) SCOP domains
CATH domains 1wsgA00 A:1-155 [code=3.30.420.10, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhh............. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE RNASE_H PDB: A:1-142 UniProt: 1-142 ------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsg A 1 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCNELARAAAMNPTLEDTGYQVEV 155
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain B from PDB Type:PROTEIN Length:155
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:155
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
RNH_ECOLI 1 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV 155
SCOP domains d1wsgb_ B: RNase H (RNase HI) SCOP domains
CATH domains 1wsgB00 B:1-155 [code=3.30.420.10, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhh.....eeeeeee.hhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhh............. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE RNASE_H PDB: B:1-142 UniProt: 1-142 ------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsg B 1 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCNELARAAAMNPTLEDTGYQVEV 155
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain C from PDB Type:PROTEIN Length:151
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:155
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
RNH_ECOLI 1 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV 155
SCOP domains d1wsgc_ C: RNase H (RNase H I) SCOP domains
CATH domains 1wsgC00 C:1-155 [code=3.30 .420.10, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeeeee....eeeeeeeeee----.eeeeeeeeeehhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhh..eeeeee.......hhhhhhhhhhhhhhh............. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE RNASE_H PDB: C:1-142 UniProt: 1-142 ------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsg C 1 MLKQVEIFTDGSCLGNPGPGGYGAILR----EKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCNELARAAAMNPTLEDTGYQVEV 155
10 20 | - | 40 50 60 70 80 90 100 110 120 130 140 150
27 32
Chain D from PDB Type:PROTEIN Length:155
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:155
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
RNH_ECOLI 1 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV 155
SCOP domains d1wsgd_ D: RNase H (RNase HI) SCOP domains
CATH domains 1wsgD00 D:1-155 [code=3.30.420.10, no name defined] CATH domains
Pfam domains (1) -RNase_H-1wsgD01 D:2-142 ------------- Pfam domains (1)
Pfam domains (2) -RNase_H-1wsgD02 D:2-142 ------------- Pfam domains (2)
Pfam domains (3) -RNase_H-1wsgD03 D:2-142 ------------- Pfam domains (3)
Pfam domains (4) -RNase_H-1wsgD04 D:2-142 ------------- Pfam domains (4)
Sec.struct. author ..eeeeeeeeeee....eeeeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhh............. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE RNASE_H PDB: D:1-142 UniProt: 1-142 ------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsg D 1 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCNELARAAAMNPTLEDTGYQVEV 155
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |