Chain A from PDB Type:PROTEIN Length:148
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:153
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
RNH_ECOLI 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVE 154
SCOP domains d1wsha_ A: RNase H (RNase HI) SCOP domains
CATH domains 1wshA00 A:2-154 [code=3.30.420.10, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh.....eeeee..hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh..eeeee..-----hhhhhhhhhhhhhhhh............ Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsh A 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWV-----HPENERCDELARAAAMNPTLEDTGYQVE 154
11 21 31 41 51 61 71 81 91 101 111 121 | 131 141 151
121 127
Chain B from PDB Type:PROTEIN Length:152
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:154
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
RNH_ECOLI 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV 155
SCOP domains d1wshb_ B: RNase H (RNase HI) SCOP domains
CATH domains 1wshB00 B:2-155 [code=3.30.420.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhh.............hhhhhhhhhhhhh..eeeeee...--.hhhhhhhhhhhhhhhh............. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsh B 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKG--GHPENERCDELARAAAMNPTLEDTGYQVEV 155
11 21 31 41 51 61 71 81 91 101 111 121 | | 131 141 151
123 |
126
Chain C from PDB Type:PROTEIN Length:147
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:151
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
RNH_ECOLI 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQ 152
SCOP domains d1wshc_ C: RNase H (RNase HI) SCOP domains
CATH domains 1wshC00 C:2-152 [code=3.30.420.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhh..eeeeee.----.hhhhhhhhhhhhhhhh.......... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsh C 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWV----GHPENERCDELARAAAMNPTLEDTGYQ 152
11 21 31 41 51 61 71 81 91 101 111 121 | 131 141 151
121 126
Chain D from PDB Type:PROTEIN Length:149
aligned with RNH_ECOLI | P0A7Y4 from UniProtKB/Swiss-Prot Length:155
Alignment length:154
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
RNH_ECOLI 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV 155
SCOP domains d1wshd_ D: RNase H (RNase HI) SCOP domains
CATH domains 1wshD00 D:2-155 [code=3.30.420.10, no name defined] CATH domains
Pfam domains (1) RNase_H-1wshD01 D:2-142 ------------- Pfam domains (1)
Pfam domains (2) RNase_H-1wshD02 D:2-142 ------------- Pfam domains (2)
Pfam domains (3) RNase_H-1wshD03 D:2-142 ------------- Pfam domains (3)
Pfam domains (4) RNase_H-1wshD04 D:2-142 ------------- Pfam domains (4)
Sec.struct. author .eeeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhh..eeeeee.-----hhhhhhhhhhhhhhhh............. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1wsh D 2 LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWV-----HPENERCDELARAAAMNPTLEDTGYQVEV 155
11 21 31 41 51 61 71 81 91 101 111 121 | 131 141 151
121 127
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |