Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  S954A MUTANT OF THE FERULOYL ESTERASE MODULE FROM CLOSTRIDIUM THERMOCELLUM COMPLEXED WITH VANILLATE
 
Authors :  N. Tarbouriech, J. A. Prates, C. Fontes, G. J. Davies
Date :  30 Oct 04  (Deposition) - 24 May 06  (Release) - 02 Feb 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Esterase Family 1, Ferulic Acid, Glycosidase, Hydrolase, Xylan Degradation (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  N. Tarbouriech, J. A. Prates, C. Fontes, G. J. Davies
Molecular Determinants Of Substrate Specificity In The Feruloyl Esterase Module Of Xylanase 10B From Clostridium Thermocellum
Acta Crystallogr. , Sect. D V. 61 194 2005
PubMed-ID: 15681871  |  Reference-DOI: 10.1107/S0907444904029695

(-) Compounds

Molecule 1 - ENDO-1,4-BETA-XYLANASE Y
    ChainsA, B
    EC Number3.2.1.8
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System VectorPET22B
    Expression System Vector TypePLASMID
    FragmentFERULOYL ESTERASE DOMAIN, RESIDUES 792-1077
    MutationYES
    Organism ScientificCLOSTRIDIUM THERMOCELLUM
    Organism Taxid1515
    SynonymXYLANASE Y, XYLY, 1,4-BETA-D-XYLAN XYLANOHYDROLASE Y, XYLANASE XYN10B

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit AB
Biological Unit 1 (1x)A 
Biological Unit 2 (1x) B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 31)

Asymmetric Unit (4, 31)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2CD20Ligand/IonCADMIUM ION
3GOL7Ligand/IonGLYCEROL
4VXX2Ligand/IonMETHYL VANILLATE
Biological Unit 1 (3, 5)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2CD-1Ligand/IonCADMIUM ION
3GOL3Ligand/IonGLYCEROL
4VXX1Ligand/IonMETHYL VANILLATE
Biological Unit 2 (3, 6)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2CD-1Ligand/IonCADMIUM ION
3GOL4Ligand/IonGLYCEROL
4VXX1Ligand/IonMETHYL VANILLATE

(-) Sites  (31, 31)

Asymmetric Unit (31, 31)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:856 , TYR A:857 , HIS A:1081 , CD A:2096 , HOH A:3344 , HOH A:3345BINDING SITE FOR RESIDUE ACT A2090
02AC2SOFTWARECYS A:823 , HIS A:886 , MET A:889 , HOH A:3147 , GLU B:1017BINDING SITE FOR RESIDUE CD A2091
03AC3SOFTWAREGLU A:894 , HIS A:1076 , GLU A:1079 , HIS A:1083 , HIS A:1085BINDING SITE FOR RESIDUE CD A2092
04AC4SOFTWAREGLU A:1007 , HIS B:1082 , HIS B:1084 , HOH B:3318 , HOH B:3329BINDING SITE FOR RESIDUE CD A2093
05AC5SOFTWAREHIS A:947 , HIS A:1080 , HOH A:3205 , HOH A:3299 , HOH A:3309BINDING SITE FOR RESIDUE CD A2094
06AC6SOFTWAREHIS A:1081 , CD A:2096 , HOH A:3315 , HOH A:3318 , HOH A:3324BINDING SITE FOR RESIDUE CD A2095
07AC7SOFTWAREHIS A:1081 , ACT A:2090 , CD A:2095BINDING SITE FOR RESIDUE CD A2096
08AC8SOFTWAREGLU A:926 , TYR A:929 , CD A:2100 , HOH A:3182 , HOH A:3185 , HOH A:3191 , HOH A:3192BINDING SITE FOR RESIDUE CD A2097
09AC9SOFTWARELYS A:1032 , LEU A:1034 , PHE A:1037 , HOH A:3264 , HOH A:3267BINDING SITE FOR RESIDUE CD A2098
10BC1SOFTWAREHIS A:1076 , HOH A:3296 , HOH A:3300 , HOH A:3304 , HOH A:3305BINDING SITE FOR RESIDUE CD A2099
11BC2SOFTWARECD A:2097 , HOH A:3182 , HOH A:3185 , HOH A:3192 , HOH A:3194 , HOH B:3175 , HOH B:3340BINDING SITE FOR RESIDUE CD A2100
12BC3SOFTWARETYR B:857 , HIS B:1081 , CD B:2097BINDING SITE FOR RESIDUE ACT B2091
13BC4SOFTWAREGLU A:1017 , CYS B:823 , HIS B:886 , MET B:889 , HOH B:3137BINDING SITE FOR RESIDUE CD B2092
14BC5SOFTWAREGLU B:894 , HIS B:1076 , GLU B:1079 , HIS B:1083 , HIS B:1085BINDING SITE FOR RESIDUE CD B2093
15BC6SOFTWAREHIS A:1082 , HIS A:1084 , HOH A:3319 , HOH A:3329 , GLU B:1007BINDING SITE FOR RESIDUE CD B2094
16BC7SOFTWAREHIS B:947 , HIS B:1080 , CD B:2099 , HOH B:3200 , HOH B:3296 , HOH B:3308BINDING SITE FOR RESIDUE CD B2095
17BC8SOFTWAREHIS B:1081 , CD B:2097 , HOH B:3315 , HOH B:3319BINDING SITE FOR RESIDUE CD B2096
18BC9SOFTWAREHIS B:1081 , ACT B:2091 , CD B:2096BINDING SITE FOR RESIDUE CD B2097
19CC1SOFTWAREHOH A:3183 , ALA B:933 , GOL B:2088 , HOH B:3181 , HOH B:3182BINDING SITE FOR RESIDUE CD B2098
20CC2SOFTWAREHIS B:947 , LEU B:1078 , HIS B:1080 , CD B:2095 , HOH B:3296BINDING SITE FOR RESIDUE CD B2099
21CC3SOFTWAREHIS B:1076 , HOH B:3292 , HOH B:3297 , HOH B:3301 , HOH B:3304BINDING SITE FOR RESIDUE CD B2100
22CC4SOFTWARELYS B:1032 , LEU B:1034 , PHE B:1037 , HOH B:3258 , HOH B:3260BINDING SITE FOR RESIDUE CD B2101
23CC5SOFTWAREALA A:954 , GLY A:979 , ASP A:980 , TRP A:982 , ALA A:1020 , ASN A:1023 , HIS A:1058 , GOL A:2087 , HOH A:3340BINDING SITE FOR RESIDUE VXX A2086
24CC6SOFTWAREGLY B:979 , ASP B:980 , TRP B:982 , ALA B:1020 , ASN B:1023 , HIS B:1058 , GOL B:2087 , HOH B:3337BINDING SITE FOR RESIDUE VXX B2086
25CC7SOFTWAREGLY A:865 , GLY A:866 , GLU A:868 , PHE A:953 , ALA A:954 , HIS A:1058 , TRP A:1060 , VXX A:2086 , HOH A:3339 , HOH A:3340BINDING SITE FOR RESIDUE GOL A2087
26CC8SOFTWARELYS A:856 , TYR A:857 , ASN A:858 , GLU A:894 , PRO A:895 , TYR A:932 , HIS A:1081 , HOH A:3341BINDING SITE FOR RESIDUE GOL A2088
27CC9SOFTWAREGLN A:915 , ARG A:918 , ASN A:966 , HOH A:3342 , HOH A:3343 , ASN B:838 , ASN B:907BINDING SITE FOR RESIDUE GOL A2089
28DC1SOFTWAREGLY B:865 , GLY B:866 , GLU B:868 , PHE B:953 , ALA B:954 , HIS B:1058 , VXX B:2086 , HOH B:3337 , HOH B:3338BINDING SITE FOR RESIDUE GOL B2087
29DC2SOFTWARESER A:927 , LYS A:928 , GLU B:926 , SER B:927 , LYS B:928 , TYR B:929 , SER B:930 , CD B:2098 , HOH B:3180 , HOH B:3339 , HOH B:3340BINDING SITE FOR RESIDUE GOL B2088
30DC3SOFTWAREILE A:837 , ASN A:838 , ASN A:907 , ASN A:912 , HOH A:3075 , GLN B:915 , ARG B:918 , ASN B:966 , HOH B:3341BINDING SITE FOR RESIDUE GOL B2089
31DC4SOFTWARELYS B:856 , TYR B:857 , ASN B:858 , GLU B:894 , PRO B:895 , TYR B:932 , HIS B:1081BINDING SITE FOR RESIDUE GOL B2090

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1WB6)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1WB6)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1WB6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1WB6)

(-) Exons   (0, 0)

(no "Exon" information available for 1WB6)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:283
 aligned with XYNY_CLOTM | P51584 from UniProtKB/Swiss-Prot  Length:1077

    Alignment length:283
                                                                                                                                                                                                                                                                                                           1077        
                                   812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022      1032      1042      1052      1062      1072    |    -   
          XYNY_CLOTM    803 SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFSMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSDHIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHE--------    -
               SCOP domains d1wb6a_ A: automated matches                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1wb6A00 A:803-1085  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                                                    CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhh......eeeeeeeee..eeeeeeeee..........eeeeee...............hhhhhhhhhhhh.....eeeee...........hhhhhhhhhhhhhhhhhh.......hhhhhhhh...eeeeeehhhhhhhhhhhhhhh....eeeee........hhhhhhhhhhhhhhhhh......eeeeeee....hhhhhhhhhhhhhh..............eeeeee.....hhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1wb6 A  803 SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHELEHHHHHH 1085
                                   812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022      1032      1042      1052      1062      1072      1082   

Chain B from PDB  Type:PROTEIN  Length:283
 aligned with XYNY_CLOTM | P51584 from UniProtKB/Swiss-Prot  Length:1077

    Alignment length:283
                                                                                                                                                                                                                                                                                                           1077        
                                   812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022      1032      1042      1052      1062      1072    |    -   
          XYNY_CLOTM    803 SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFSMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSDHIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHE--------    -
               SCOP domains d1wb6b_ B: automated matches                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1wb6B00 B:803-1085  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                                                    CATH domains
           Pfam domains (1) --------------------------------Esterase-1wb6B01 B:835-1072                                                                                                                                                                                                                   ------------- Pfam domains (1)
           Pfam domains (2) --------------------------------Esterase-1wb6B02 B:835-1072                                                                                                                                                                                                                   ------------- Pfam domains (2)
         Sec.struct. author .............hhhhhh......eeeeeeeee..eeeeeeeee..........eeeeee...............hhhhhhhhhhhh.....eeeee...........hhhhhhhhhhhhhhhhhh.......hhhhhhhh...eeeeeehhhhhhhhhhhhhhh....eeeee........hhhhhhhhhhhhhhhhh......eeeeeee....hhhhhhhhhhhhhh..............eeeeee.....hhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1wb6 B  803 SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHELEHHHHHH 1085
                                   812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022      1032      1042      1052      1062      1072      1082   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit

(-) CATH Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 2)

Asymmetric Unit

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (XYNY_CLOTM | P51584)
molecular function
    GO:0031176    endo-1,4-beta-xylanase activity    Catalysis of the endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0000272    polysaccharide catabolic process    The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
    GO:0045493    xylan catabolic process    The chemical reactions and pathways resulting in the breakdown of xylan, a polymer containing a beta-1,4-linked D-xylose backbone.
cellular component
    GO:0043263    cellulosome    An extracellular multi-enzyme complex containing up to 11 different enzymes aligned on a non-catalytic scaffolding glycoprotein. Functions to hydrolyze cellulose.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    ACT  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    VXX  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1wb6)
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1wb6
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  XYNY_CLOTM | P51584
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.2.1.8
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  XYNY_CLOTM | P51584
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        XYNY_CLOTM | P515841dyo 1gkk 1gkl 1h6x 1h6y 1ohz 1wb4 1wb5 2ccl 2w5f 2wys 2wze 3zi7 4bag 4h35 5fxm

(-) Related Entries Specified in the PDB File

1dyo XYLAN-BINDING DOMAIN FROM CBM 22, FORMALLY X6B DOMAIN
1gkk FERULOYL ESTERASE DOMAIN OF XYNY FROM CLOSTRIDIUM THERMOCELLUM
1gkl S954A MUTANT OF THE FERULOYL ESTERASE MODULE FROM CLOSTRIDIUM THERMOCELLUM COMPLEXED WITH FERULIC ACID
1h6x THE ROLE OF CONSERVED AMONI ACIDS IN THE CLEFT OF THE C-TERMINAL FAMILY 22 CARBOHYDRATE BINDING MODULE OF CLOSTRIDIUM THERMOCELLUM XYN10B IN LIGAND BINDING
1h6y THE ROLE OF CONSERVED AMONI ACIDS IN THE CLEFT OF THE C-TERMINAL FAMILY 22 CARBOHYDRATE BINDING MODULE OF CLOSTRIDIUM THERMOCELLUM XYN10B IN LIGAND BINDING
1ohz COHESIN-DOCKERIN COMPLEX FROM THE CELLULOSOME OF CLOSTRIDIUM THERMOCELLUM
1wb4 S954A MUTANT OF THE FERULOYL ESTERASE MODULE FROM CLOSTRIDIUM THERMOCELLUM COMPLEXED WITH SINAPINATE
1wb5 S954A MUTANT OF THE FERULOYL ESTERASE MODULE FROM CLOSTRIDIUM THERMOCELLUM COMPLEXED WITH SYRINGATE
2ccl THE S45A, T46A MUTANT OF THE TYPE I COHESIN-DOCKERIN COMPLEX FROM THE CELLULOSOME OF CLOSTRIDIUM THERMOCELLUM