1WB4 - JenaLib

Asymmetric Unit (28, 28)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	CYS A:823 , HIS A:886 , MET A:889 , HOH A:3157 , GLU B:1017	BINDING SITE FOR RESIDUE CD A2090
02	AC2	SOFTWARE	GLU A:894 , HIS A:1076 , GLU A:1079 , HIS A:1083 , HIS A:1085	BINDING SITE FOR RESIDUE CD A2091
03	AC3	SOFTWARE	GLU A:1007 , HOH A:3259 , HIS B:1082 , HIS B:1084 , HOH B:3364	BINDING SITE FOR RESIDUE CD A2092
04	AC4	SOFTWARE	HIS A:947 , HIS A:1080 , HOH A:3218 , HOH A:3331 , HOH A:3341	BINDING SITE FOR RESIDUE CD A2093
05	AC5	SOFTWARE	HIS A:1081 , CD A:2095 , HOH A:3347 , HOH A:3353	BINDING SITE FOR RESIDUE CD A2094
06	AC6	SOFTWARE	HIS A:1081 , ACY A:2089 , CD A:2094 , HOH A:3369	BINDING SITE FOR RESIDUE CD A2095
07	AC7	SOFTWARE	HIS A:1076 , HOH A:3326 , HOH A:3332 , HOH A:3335 , HOH A:3336	BINDING SITE FOR RESIDUE CD A2096
08	AC8	SOFTWARE	GLU A:926 , TYR A:929 , CD A:2099 , HOH A:3193 , HOH A:3197 , HOH A:3202 , HOH A:3203	BINDING SITE FOR RESIDUE CD A2097
09	AC9	SOFTWARE	ASN A:985 , HOH A:3229 , HOH B:3096 , HOH B:3234	BINDING SITE FOR RESIDUE CD A2098
10	BC1	SOFTWARE	CD A:2097 , HOH A:3193 , HOH A:3197 , HOH A:3202 , HOH A:3206 , HOH B:3209 , HOH B:3376	BINDING SITE FOR RESIDUE CD A2099
11	BC2	SOFTWARE	GLU A:1017 , CYS B:823 , HIS B:886 , MET B:889 , HOH B:3157	BINDING SITE FOR RESIDUE CD B2092
12	BC3	SOFTWARE	GLU B:894 , HIS B:1076 , GLU B:1079 , HIS B:1083 , HIS B:1085	BINDING SITE FOR RESIDUE CD B2093
13	BC4	SOFTWARE	HIS A:1082 , HIS A:1084 , HOH A:3354 , GLU B:1007 , HOH B:3264	BINDING SITE FOR RESIDUE CD B2094
14	BC5	SOFTWARE	HIS B:947 , HIS B:1080 , HOH B:3216 , HOH B:3217 , HOH B:3342 , HOH B:3350	BINDING SITE FOR RESIDUE CD B2095
15	BC6	SOFTWARE	HIS B:1081 , CD B:2097 , HOH B:3355 , HOH B:3357 , HOH B:3362	BINDING SITE FOR RESIDUE CD B2096
16	BC7	SOFTWARE	HIS B:1081 , ACY B:2091 , CD B:2096 , HOH B:3357 , HOH B:3378	BINDING SITE FOR RESIDUE CD B2097
17	BC8	SOFTWARE	HOH A:3194 , ALA B:933 , GOL B:2088 , HOH B:3197 , HOH B:3198	BINDING SITE FOR RESIDUE CD B2098
18	BC9	SOFTWARE	HIS B:1076 , HOH B:3339 , HOH B:3341 , HOH B:3344 , HOH B:3346	BINDING SITE FOR RESIDUE CD B2099
19	CC1	SOFTWARE	ALA A:954 , MET A:955 , LEU A:958 , GLY A:979 , ASP A:980 , TRP A:982 , ALA A:1020 , ASN A:1023 , HOH A:3272 , HOH A:3365 , HOH A:3366	BINDING SITE FOR RESIDUE SXX A2086
20	CC2	SOFTWARE	MET B:955 , LEU B:958 , GLY B:979 , ASP B:980 , TRP B:982 , ALA B:1020 , ASN B:1023 , GOL B:2087 , HOH B:3373 , HOH B:3374	BINDING SITE FOR RESIDUE SXX B2086
21	CC3	SOFTWARE	GLY A:865 , GLY A:866 , GLU A:868 , PHE A:953 , ALA A:954 , HIS A:1058 , HOH A:3366 , HOH A:3367	BINDING SITE FOR RESIDUE GOL A2087
22	CC4	SOFTWARE	LYS A:856 , TYR A:857 , ASN A:858 , GLU A:894 , PRO A:895 , TYR A:932 , HIS A:1081 , HOH A:3368	BINDING SITE FOR RESIDUE GOL A2088
23	CC5	SOFTWARE	LYS A:856 , TYR A:857 , HIS A:1081 , CD A:2095 , HOH A:3370 , HOH A:3371	BINDING SITE FOR RESIDUE ACY A2089
24	CC6	SOFTWARE	GLY B:865 , GLY B:866 , GLU B:868 , PHE B:953 , ALA B:954 , HIS B:1058 , SXX B:2086 , HOH B:3373 , HOH B:3375	BINDING SITE FOR RESIDUE GOL B2087
25	CC7	SOFTWARE	SER A:927 , LYS A:928 , GLU B:926 , SER B:927 , LYS B:928 , TYR B:929 , SER B:930 , CD B:2098 , HOH B:3195 , HOH B:3196 , HOH B:3376	BINDING SITE FOR RESIDUE GOL B2088
26	CC8	SOFTWARE	ILE A:837 , ASN A:838 , ASN A:907 , ASN A:912 , GLN B:915 , ASN B:966 , HOH B:3183 , HOH B:3377	BINDING SITE FOR RESIDUE GOL B2089
27	CC9	SOFTWARE	LYS B:856 , TYR B:857 , ASN B:858 , GLU B:894 , PRO B:895 , TYR B:932 , HIS B:1081	BINDING SITE FOR RESIDUE GOL B2090
28	DC1	SOFTWARE	LYS B:856 , TYR B:857 , HIS B:1081 , CD B:2097 , HOH B:3113 , HOH B:3378 , HOH B:3379	BINDING SITE FOR RESIDUE ACY B2091

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:283
 aligned with XYNY_CLOTM | P51584 from UniProtKB/Swiss-Prot  Length:1077

    Alignment length:283
                                                                                                                                                                                                                                                                                                           1077        
                                   812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022      1032      1042      1052      1062      1072    |    -   
          XYNY_CLOTM    803 SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFSMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSDHIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHE--------    -
               SCOP domains d1wb4a_ A: automated matches                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1wb4A00 A:803-1085  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                                                    CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhh......eeeeeeeee..eeeeeeeee..........eeeeee...............hhhhhhhhhhhh.....eeeee...........hhhhhhhhhhhhhhhhhh.......hhhhhhhhhh.eeeeeehhhhhhhhhhhhhhh....eeeee........hhhhhhhhhhhhhhhhh......eeeeeee....hhhhhhhhhhhhhh..............eeeeee.....hhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1wb4 A  803 SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHELEHHHHHH 1085
                                   812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022      1032      1042      1052      1062      1072      1082

Chain B from PDB  Type:PROTEIN  Length:283
 aligned with XYNY_CLOTM | P51584 from UniProtKB/Swiss-Prot  Length:1077

    Alignment length:283
                                                                                                                                                                                                                                                                                                           1077        
                                   812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022      1032      1042      1052      1062      1072    |    -   
          XYNY_CLOTM    803 SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFSMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSDHIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHE--------    -
               SCOP domains d1wb4b_ B: automated matches                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1wb4B00 B:803-1085  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                                                    CATH domains
           Pfam domains (1) --------------------------------Esterase-1wb4B01 B:835-1072                                                                                                                                                                                                                   ------------- Pfam domains (1)
           Pfam domains (2) --------------------------------Esterase-1wb4B02 B:835-1072                                                                                                                                                                                                                   ------------- Pfam domains (2)
         Sec.struct. author .............hhhhhh......eeeeeeeee..eeeeeeeee..........eeeeee...............hhhhhhhhhhhh.....eeeee...........hhhhhhhhhhhhhhhhhh.......hhhhhhhh...eeeeeehhhhhhhhhhhhhhh....eeeee........hhhhhhhhhhhhhhhhh......eeeeeee....hhhhhhhhhhhhhh..............eeeeee.....hhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1wb4 B  803 SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHELEHHHHHH 1085
                                   812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962       972       982       992      1002      1012      1022      1032      1042      1052      1062      1072      1082

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 2)

Pfam Domains (1, 2)

Gene Ontology (9, 9)

Asymmetric Unit(hide GO term definitions)

Chain A,B (XYNY_CLOTM | P51584)

molecular function
	GO:0031176	endo-1,4-beta-xylanase activity	Catalysis of the endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0016798	hydrolase activity, acting on glycosyl bonds	Catalysis of the hydrolysis of any glycosyl bond.
	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Catalysis of the hydrolysis of any O-glycosyl bond.
biological process
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0000272	polysaccharide catabolic process	The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
	GO:0045493	xylan catabolic process	The chemical reactions and pathways resulting in the breakdown of xylan, a polymer containing a beta-1,4-linked D-xylose backbone.
cellular component
	GO:0043263	cellulosome	An extracellular multi-enzyme complex containing up to 11 different enzymes aligned on a non-catalytic scaffolding glycoprotein. Functions to hydrolyze cellulose.

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	Cis Peptide Bonds
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	1wb4
		Family and Domain Information	:	ProDom \| SYSTERS
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	XYNY_CLOTM \| P51584
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	3.2.1.8
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 28)

Sites (28, 28)