Chain B from PDB Type:PROTEIN Length:123
aligned with SAV_STRAV | P22629 from UniProtKB/Swiss-Prot Length:183
Alignment length:123
46 56 66 76 86 96 106 116 126 136 146 156
SAV_STRAV 37 AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKP 159
SCOP domains d1vwkb_ B: Streptavidin SCOP domains
CATH domains 1vwkB00 B:13-135 [code=2.40.128.30, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhh.eeeee....eeeeee....eeeeeee........eeeeeeee..........eeeeeeee.........eeeeeeeeee.....eeeeeeeeee...hhhhhh.eeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) AVIDIN_2 PDB: B:13-135 UniProt: 37-159 PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------------------------------------AVIDIN_1 --- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
1vwk B 13 AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKP 135
22 32 42 52 62 72 82 92 102 112 122 132
Chain D from PDB Type:PROTEIN Length:121
aligned with SAV_STRAV | P22629 from UniProtKB/Swiss-Prot Length:183
Alignment length:121
46 56 66 76 86 96 106 116 126 136 146 156
SAV_STRAV 37 AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKV 157
SCOP domains d1vwkd_ D: Streptavidin SCOP domains
CATH domains 1vwkD00 D:13-133 [code=2.40.128.30, no name defined] CATH domains
Pfam domains (1) --Avidin-1vwkD01 D:15-132 - Pfam domains (1)
Pfam domains (2) --Avidin-1vwkD02 D:15-132 - Pfam domains (2)
Sec.struct. author .hhh..eeee.....eeeeee....eeeeeee........eeeeeeee..........eeeeeeee.........eeeeeeeeee.....eeeeeeeeee...hhhhhh.eeeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) AVIDIN_2 PDB: D:13-133 UniProt: 37-159 PROSITE (1)
PROSITE (2) ---------------------------------------------------------------------------------------------------------AVIDIN_1 - PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
1vwk D 13 AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKV 133
22 32 42 52 62 72 82 92 102 112 122 132
Chain M from PDB Type:PROTEIN Length:9
SCOP domains --------- SCOP domains
CATH domains --------- CATH domains
Pfam domains --------- Pfam domains
Sec.struct. author ......... Sec.struct. author
SAPs(SNPs) --------- SAPs(SNPs)
PROSITE --------- PROSITE
Transcript --------- Transcript
1vwk M 3 HPQGPPCKx 10
||||
8|||
1||
9|
10-NH2
Chain P from PDB Type:PROTEIN Length:9
SCOP domains --------- SCOP domains
CATH domains --------- CATH domains
Pfam domains --------- Pfam domains
Sec.struct. author ......... Sec.struct. author
SAPs(SNPs) --------- SAPs(SNPs)
PROSITE --------- PROSITE
Transcript --------- Transcript
1vwk P 3 HPQGPPCKx 10
||||
8|||
1||
9|
10-NH2
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |