Chain A from PDB Type:PROTEIN Length:113
aligned with SAV_STRAV | P22629 from UniProtKB/Swiss-Prot Length:183
Alignment length:120
49 59 69 79 89 99 109 119 129 139 149 159
SAV_STRAV 40 GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKP 159
SCOP domains d1n7ya_ A: Streptavidin SCOP domains
CATH domains 1n7yA00 A:16-135 [code=2.40. 128.30, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...eeeee....eeeeee....eeeeeee-------..eeeeeee..........eeeeeeeeee....eeeeeeeeeeeee.....eeeeeeeeee..hhhhhhh.eeeeeeeee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------AVIDIN_1 --- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
1n7y A 16 GITGTWYEQLGSTFIVTAGADGALTGTYE-------SRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKP 135
25 35 |- | 55 65 75 85 95 105 115 125 135
44 52
Chain B from PDB Type:PROTEIN Length:114
aligned with SAV_STRAV | P22629 from UniProtKB/Swiss-Prot Length:183
Alignment length:118
49 59 69 79 89 99 109 119 129 139 149
SAV_STRAV 40 GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKV 157
SCOP domains d1n7yb_ B: Streptavidin SCOP domains
CATH domains 1n7yB00 B:16-133 [code=2.40. 128.30, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeee....eeeeee....eeeeeee----hhhhheeeeeee..........eeeeeeeeeee..eeeeeeeeeeeeee.....eeeeeeeeee..hhhhhhh.eeeeeeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------AVIDIN_1 - PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
1n7y B 16 GITGTWYEQLGSTFIVTAGADGALTGTYE----NAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKV 133
25 35 |- | 55 65 75 85 95 105 115 125
44 49
Chain C from PDB Type:PROTEIN Length:115
aligned with SAV_STRAV | P22629 from UniProtKB/Swiss-Prot Length:183
Alignment length:119
49 59 69 79 89 99 109 119 129 139 149
SAV_STRAV 40 GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVK 158
SCOP domains d1n7yc_ C: Streptavidin SCOP domains
CATH domains 1n7yC00 C:16-134 [code=2.40.1 28.30, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeee....eeeeee....eeeeeee.----...eeeeeeee..........eeeeeeeeee....eeeeeeeeeeeee.....eeeeeeeeee..hhhhhhh.eeeeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------AVIDIN_1 -- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
1n7y C 16 GITGTWYEQLGSTFIVTAGADGALTGTYES----AESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVK 134
25 35 45 | 55 65 75 85 95 105 115 125
45 50
Chain D from PDB Type:PROTEIN Length:114
aligned with SAV_STRAV | P22629 from UniProtKB/Swiss-Prot Length:183
Alignment length:119
49 59 69 79 89 99 109 119 129 139 149
SAV_STRAV 40 GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVK 158
SCOP domains d1n7yd_ D: Streptavidin SCOP domains
CATH domains 1n7yD00 D:16-134 [code=2.40. 128.30, no name defined] CATH domains
Pfam domains (1) Avidin-1n7yD01 D:16-132 -- Pfam domains (1)
Pfam domains (2) Avidin-1n7yD02 D:16-132 -- Pfam domains (2)
Pfam domains (3) Avidin-1n7yD03 D:16-132 -- Pfam domains (3)
Pfam domains (4) Avidin-1n7yD04 D:16-132 -- Pfam domains (4)
Sec.struct. author ...eeeee....eeeeee....eeeeeee-----....eeeeeee..........eeeeeeeeee....eeeeeeeeeeeee.....eeeeeeeeee..hhhhhhh.eeeeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------AVIDIN_1 -- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
1n7y D 16 GITGTWYEQLGSTFIVTAGADGALTGTYE-----AESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVK 134
25 35 |- | 55 65 75 85 95 105 115 125
44 50
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |