Chain A from PDB Type:PROTEIN Length:112
aligned with SAV_STRAV | P22629 from UniProtKB/Swiss-Prot Length:183
Alignment length:117
49 59 69 79 89 99 109 119 129 139 149
SAV_STRAV 40 GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK 156
SCOP domains d1swja_ A: Streptavidin SCOP domains
CATH domains 1swjA00 A:16-132 [code=2.40. 128.30, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee.....eeeeee....eeeeeee-----....eeeeeee..........eeeeeeee.........eeeeeeeeee.....eeeeeeeeee...hhhhhh.eeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------AVIDIN_1 PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
1swj A 16 GITGTWYNQLGSTFIVTAGADGALTGTYE-----AESRYVLTGRYDSAPATDGSGTALGWTVAFKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK 132
25 35 |- | 55 65 75 85 95 105 115 125
44 50
Chain B from PDB Type:PROTEIN Length:118
aligned with SAV_STRAV | P22629 from UniProtKB/Swiss-Prot Length:183
Alignment length:118
49 59 69 79 89 99 109 119 129 139 149
SAV_STRAV 40 GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKV 157
SCOP domains d1swjb_ B: Streptavidin SCOP domains
CATH domains 1swjB00 B:16-133 [code=2.40.128.30, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee.....eeeeee....eeeeeee........eeeeeeee..........eeeeeeee.........eeeeeeeeee.....eeeeeeeeee...hhhhhh.eeeeeeee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------AVIDIN_1 - PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
1swj B 16 GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAFKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKV 133
25 35 45 55 65 75 85 95 105 115 125
Chain C from PDB Type:PROTEIN Length:117
aligned with SAV_STRAV | P22629 from UniProtKB/Swiss-Prot Length:183
Alignment length:117
49 59 69 79 89 99 109 119 129 139 149
SAV_STRAV 40 GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK 156
SCOP domains d1swjc_ C: Streptavidin SCOP domains
CATH domains 1swjC00 C:16-132 [code=2.40.128.30, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee.....eeeeee....eeeeeee........eeeeeeee..........eeeeeeee.........eeeeeeeeee.....eeeeeeeeee...hhhhhh.eeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------AVIDIN_1 PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
1swj C 16 GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAFKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK 132
25 35 45 55 65 75 85 95 105 115 125
Chain D from PDB Type:PROTEIN Length:113
aligned with SAV_STRAV | P22629 from UniProtKB/Swiss-Prot Length:183
Alignment length:118
49 59 69 79 89 99 109 119 129 139 149
SAV_STRAV 40 GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKV 157
SCOP domains d1swjd_ D: Streptavidin SCOP domains
CATH domains 1swjD00 D:16-133 [code=2.40. 128.30, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee.....eeeeee....eeeeeee-----....eeeeeee..........eeeeeeee.........eeeeeeeeee.....eeeeeeeeee......hhh.eeeeeeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------AVIDIN_1 - PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
1swj D 16 GITGTWYNQLGSTFIVTAGADGALTGTYE-----AESRYVLTGRYDSAPATDGSGTALGWTVAFKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKV 133
25 35 |- | 55 65 75 85 95 105 115 125
44 50
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |