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Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE ANALYSIS OF RAT ENOYL-COA HYDRATASE IN COMPLEX WITH HEXADIENOYL-COA

Authors :   A. F. Bell, Y. Feng, H. A. Hofstein, S. Parikh, J. Wu, M. J. Rudolph, C. Kisker, P. J. Tonge

Date :   26 Aug 02 (Deposition) - 24 Sep 02 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym./Biol. Unit : A,B,C,D,E,F

Keywords :   Homohexamer, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. F. Bell, Y. Feng, H. A. Hofstein, S. Parikh, J. Wu, M. J. Rudolph, C. Kisker, A. Whitty, P. J. Tonge
Stereoselectivity Of Enoyl-Coa Hydratase Results From Preferential Activation Of One Of Two Bound Substrate Conformers
Chem. Biol. V. 9 1247 2002
PubMed-ID: 12445775 | Reference-DOI: 10.1016/S1074-5521(02)00263-6
(for further references see the PDB file header)

Molecule 1 - ENOYL-COA HYDRATASE, MITOCHONDRIAL
	Chains	:	A, B, C, D, E, F
	EC Number	:	4.2.1.17
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Common	:	NORWAY RAT
	Organism Scientific	:	RATTUS NORVEGICUS
	Organism Taxid	:	10116
	Synonym	:	SHORT CHAIN ENOYL-COA HYDRATASE, ENOYL-COA HYDRATASE 1, SCEH

		1	2	3	4	5	6
Asymmetric/Biological Unit	:	A	B	C	D	E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (1, 5)

No.	Name	Count	Type	Full Name
1	HXC	5	Ligand/Ion	HEXANOYL-COENZYME A

Asymmetric Unit (5, 5)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LYS A:56 , ALA A:57 , LEU A:58 , ALA A:60 , ALA A:96 , GLY A:97 , ALA A:98 , ASP A:99 , ILE A:100 , LYS A:101 , LEU A:117 , LEU A:139 , GLY A:141 , PRO A:163 , GLU A:164 , LEU A:167 , GLY A:172 , HOH A:960 , HOH A:990 , HOH A:1020 , HOH A:1048 , HOH A:1060 , HOH A:1069 , PHE B:279 , LYS B:282 , LYS F:282	BINDING SITE FOR RESIDUE HXC A 951
2	AC2	SOFTWARE	LYS B:56 , ALA B:57 , ALA B:60 , ALA B:96 , GLY B:97 , ALA B:98 , ASP B:99 , ILE B:100 , LYS B:101 , LEU B:139 , GLY B:140 , GLY B:141 , PRO B:163 , LEU B:167 , GLY B:172 , HOH B:995 , HOH B:1078 , HOH B:1087 , HOH B:1089 , PHE C:279 , LYS C:282	BINDING SITE FOR RESIDUE HXC B 952
3	AC3	SOFTWARE	PHE A:279 , LYS A:282 , LYS C:43 , ASN C:44 , ALA C:57 , LEU C:58 , ALA C:60 , LYS C:92 , ALA C:96 , GLY C:97 , ALA C:98 , ASP C:99 , ILE C:100 , LYS C:101 , LEU C:139 , GLY C:140 , GLY C:141 , PRO C:163 , GLU C:164 , LEU C:167 , GLY C:172 , HOH C:986 , HOH C:994 , HOH C:1018 , HOH C:1041 , HOH C:1076	BINDING SITE FOR RESIDUE HXC C 953
4	AC4	SOFTWARE	HOH A:1048 , LYS B:282 , LYS E:56 , ALA E:57 , LEU E:58 , ALA E:60 , LYS E:92 , ALA E:96 , GLY E:97 , ALA E:98 , ASP E:99 , ILE E:100 , LYS E:101 , LEU E:117 , LEU E:139 , GLY E:141 , PRO E:163 , LEU E:167 , GLY E:172 , ARG E:197 , HOH E:987 , HOH E:992 , HOH E:1001 , HOH E:1015 , HOH E:1102 , PHE F:279 , LYS F:282 , HOH F:991	BINDING SITE FOR RESIDUE HXC E 954
5	AC5	SOFTWARE	PHE D:279 , LYS D:282 , LYS F:56 , ALA F:57 , ALA F:60 , ALA F:96 , GLY F:97 , ALA F:98 , ASP F:99 , ILE F:100 , LYS F:101 , MET F:103 , LEU F:117 , GLY F:140 , GLY F:141 , PRO F:163 , LEU F:167 , ARG F:197 , HOH F:1083 , HOH F:1095	BINDING SITE FOR RESIDUE HXC F 955

(no "SS Bond" information available for 1MJ3)

(no "Cis Peptide Bond" information available for 1MJ3)

(no "SAP(SNP)/Variant" information available for 1MJ3)

Asymmetric/Biological Unit (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ENOYL_COA_HYDRATASE	PS00166	Enoyl-CoA hydratase/isomerase signature.	ECHM_RAT	131-151	6	A:131-151 B:131-151 C:131-151 D:131-151 E:131-151 F:131-151

Asymmetric/Biological Unit (7, 42)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSRNOT00000025446	1	ENSRNOE00000179019	chr1:199910412-199910308	105	ECHM_RAT	1-30	30	0	-	-
1.2	ENSRNOT00000025446	2	ENSRNOE00000180786	chr1:199908251-199908054	198	ECHM_RAT	30-96	67	6	A:31-96 B:31-96 C:31-96 D:31-96 E:31-96 F:31-96	66 66 66 66 66 66
1.3	ENSRNOT00000025446	3	ENSRNOE00000180948	chr1:199907664-199907537	128	ECHM_RAT	96-138	43	6	A:96-138 (gaps) B:96-138 (gaps) C:96-138 (gaps) D:96-138 (gaps) E:96-138 (gaps) F:96-138 (gaps)	43 43 43 43 43 43
1.4	ENSRNOT00000025446	4	ENSRNOE00000181097	chr1:199906925-199906826	100	ECHM_RAT	139-172	34	6	A:139-172 B:139-172 C:139-172 D:139-172 E:139-172 F:139-172	34 34 34 34 34 34
1.5	ENSRNOT00000025446	5	ENSRNOE00000181259	chr1:199905995-199905891	105	ECHM_RAT	172-207	36	6	A:172-207 B:172-207 C:172-207 D:172-207 E:172-207 F:172-207	36 36 36 36 36 36
1.6	ENSRNOT00000025446	6	ENSRNOE00000179510	chr1:199905454-199905335	120	ECHM_RAT	207-247	41	6	A:207-247 B:207-247 C:207-247 D:207-247 E:207-247 F:207-247	41 41 41 41 41 41
1.7	ENSRNOT00000025446	7	ENSRNOE00000181392	chr1:199903551-199903484	68	ECHM_RAT	247-269	23	6	A:247-269 B:247-269 C:247-269 D:247-269 E:247-269 F:247-269	23 23 23 23 23 23
1.8	ENSRNOT00000025446	8	ENSRNOE00000181536	chr1:199902222-199901588	635	ECHM_RAT	270-290	21	6	A:270-290 B:270-290 C:270-290 D:270-290 E:270-290 F:270-290	21 21 21 21 21 21

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:258
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:260
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
             ECHM_RAT    31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d1mj3a_ A: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                           SCOP domains
               CATH domains 1mj3A01 A:31-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                 1mj3A02 A:233-289                                        - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeehhhh.eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeee....eee...hhhhhh..hhhhhhhh--.hhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eeehhhhhhh........hhhhhhhhhhhhhhhhhhh..eehhhhhhh....eee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: A:31-96 UniProt: 30-96 [INCOMPLETE]                ------------------------------------------Exon 1.4  PDB: A:139-172          ----------------------------------Exon 1.6  PDB: A:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------Exon 1.3  PDB: A:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: A:172-207            ---------------------------------------Exon 1.7  PDB: A:247-26--------------------- Transcript 1 (2)
                 1mj3 A  31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSG--LSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    40        50        60        70        80        90       100       110   |  |120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
                                                                                                             114  |                                                                                                                                                                             
                                                                                                                117

Chain B from PDB  Type:PROTEIN  Length:258
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:260
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
             ECHM_RAT    31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d1mj3b_ B: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                           SCOP domains
               CATH domains 1mj3B01 B:31-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                 1mj3B02 B:233-289                                        - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeehhhh.eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeee....eee...hhhhhh..hhhhhhhh--.hhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eeehhhhhhh........hhhhhhhhhhhhhhhhhhh..eehhhhhhh....eee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: B:31-96 UniProt: 30-96 [INCOMPLETE]                ------------------------------------------Exon 1.4  PDB: B:139-172          ----------------------------------Exon 1.6  PDB: B:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------Exon 1.3  PDB: B:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: B:172-207            ---------------------------------------Exon 1.7  PDB: B:247-26--------------------- Transcript 1 (2)
                 1mj3 B  31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSG--LSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    40        50        60        70        80        90       100       110   |  |120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
                                                                                                             114  |                                                                                                                                                                             
                                                                                                                117

Chain C from PDB  Type:PROTEIN  Length:258
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:260
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
             ECHM_RAT    31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d1mj3c_ C: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                           SCOP domains
               CATH domains 1mj3C01 C:31-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                 1mj3C02 C:233-289                                        - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeehhhh.eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeee....eee...hhhhhh..hhhhhhhh--....hhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eeehhhhhhh........hhhhhhhhhhhhhhhhhhh..eehhhhhhh....eee...hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: C:31-96 UniProt: 30-96 [INCOMPLETE]                ------------------------------------------Exon 1.4  PDB: C:139-172          ----------------------------------Exon 1.6  PDB: C:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------Exon 1.3  PDB: C:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: C:172-207            ---------------------------------------Exon 1.7  PDB: C:247-26--------------------- Transcript 1 (2)
                 1mj3 C  31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSG--LSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    40        50        60        70        80        90       100       110   |  |120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
                                                                                                             114  |                                                                                                                                                                             
                                                                                                                117

Chain D from PDB  Type:PROTEIN  Length:258
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:260
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
             ECHM_RAT    31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d1mj3d_ D: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                           SCOP domains
               CATH domains 1mj3D01 D:31-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                 1mj3D02 D:233-289                                        - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeehhhh.eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeee....eee....hhhhhh.hhhhhhhh--hhhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eeehhhhhhh........hhhhhhhhhhhhhhhhhhh..eehhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: D:31-96 UniProt: 30-96 [INCOMPLETE]                ------------------------------------------Exon 1.4  PDB: D:139-172          ----------------------------------Exon 1.6  PDB: D:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------Exon 1.3  PDB: D:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: D:172-207            ---------------------------------------Exon 1.7  PDB: D:247-26--------------------- Transcript 1 (2)
                 1mj3 D  31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSG--LSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    40        50        60        70        80        90       100       110   |  |120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
                                                                                                             114  |                                                                                                                                                                             
                                                                                                                117

Chain E from PDB  Type:PROTEIN  Length:258
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:260
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
             ECHM_RAT    31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d1mj3e_ E: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                           SCOP domains
               CATH domains 1mj3E01 E:31-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                 1mj3E02 E:233-289                                        - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeehhhh.eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeee....eee...hhhhhh..hhhhhhhh--.hhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eeehhhhhhh........hhhhhhhhhhhhhhhhhhh..eehhhhhhh....eee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: E:31-96 UniProt: 30-96 [INCOMPLETE]                ------------------------------------------Exon 1.4  PDB: E:139-172          ----------------------------------Exon 1.6  PDB: E:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------Exon 1.3  PDB: E:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: E:172-207            ---------------------------------------Exon 1.7  PDB: E:247-26--------------------- Transcript 1 (2)
                 1mj3 E  31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSG--LSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    40        50        60        70        80        90       100       110   |  |120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
                                                                                                             114  |                                                                                                                                                                             
                                                                                                                117

Chain F from PDB  Type:PROTEIN  Length:258
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:260
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
             ECHM_RAT    31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d1mj3f_ F: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                           SCOP domains
               CATH domains 1mj3F01 F:31-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                 1mj3F02 F:233-289                                        - CATH domains
           Pfam domains (1) ---------ECH-1mj3F01 F:40-282                                                                                                                                                                                                                               -------- Pfam domains (1)
           Pfam domains (2) ---------ECH-1mj3F02 F:40-282                                                                                                                                                                                                                               -------- Pfam domains (2)
           Pfam domains (3) ---------ECH-1mj3F03 F:40-282                                                                                                                                                                                                                               -------- Pfam domains (3)
           Pfam domains (4) ---------ECH-1mj3F04 F:40-282                                                                                                                                                                                                                               -------- Pfam domains (4)
           Pfam domains (5) ---------ECH-1mj3F05 F:40-282                                                                                                                                                                                                                               -------- Pfam domains (5)
           Pfam domains (6) ---------ECH-1mj3F06 F:40-282                                                                                                                                                                                                                               -------- Pfam domains (6)
         Sec.struct. author .....eeeeeehhhh.eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeee....eee...hhhhhh..hhhhhhhh--hhhhhhhhhh...eeeee..eeehhhhhhhhhh.eeeee...eeehhhhhhh........hhhhhhhhhhhhhhhhhhh..eehhhhhhh....eee...hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: F:31-96 UniProt: 30-96 [INCOMPLETE]                ------------------------------------------Exon 1.4  PDB: F:139-172          ----------------------------------Exon 1.6  PDB: F:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------Exon 1.3  PDB: F:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: F:172-207            ---------------------------------------Exon 1.7  PDB: F:247-26--------------------- Transcript 1 (2)
                 1mj3 F  31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSG--LSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    40        50        60        70        80        90       100       110   |  |120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
                                                                                                             114  |                                                                                                                                                                             
                                                                                                                117

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

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Folds(

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Superfamilies( (-)

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Families(

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Protein Domains( (-)

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Organisms( (-)

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Class: Alpha and beta proteins (a/b) (23833)

Fold: ClpP/crotonase (207)

Superfamily: ClpP/crotonase (207)

Family: Crotonase-like (39)

Protein domain: Enoyl-CoA hydratase (crotonase) (5)

Norway rat (Rattus norvegicus) [TaxId: 10116] (4)

1a	d1mj3a_	A:
1b	d1mj3b_	B:
1c	d1mj3c_	C:
1d	d1mj3d_	D:
1e	d1mj3e_	E:
1f	d1mj3f_	F:

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

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Topologies( (-)

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Homologous Superfamilies( (-)

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Organisms( (-)

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Class: Alpha Beta (26913)

Architecture: Alpha-Beta Complex (3881)

Topology: 2-enoyl-CoA Hydratase; Chain A, domain 1 (89)

Homologous Superfamily: 2-enoyl-CoA Hydratase; Chain A, domain 1 (89)

Norway rat (Rattus norvegicus) (6)

1a	1mj3A01	A:31-232
1b	1mj3B01	B:31-232
1c	1mj3C01	C:31-232
1d	1mj3D01	D:31-232
1e	1mj3E01	E:31-232
1f	1mj3F01	F:31-232

Class: Mainly Alpha (13335)

Architecture: Orthogonal Bundle (10391)

Topology: Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 (25)

Homologous Superfamily: Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 (25)

Norway rat (Rattus norvegicus) (5)

2a	1mj3A02	A:233-289
2b	1mj3B02	B:233-289
2c	1mj3C02	C:233-289
2d	1mj3D02	D:233-289
2e	1mj3E02	E:233-289
2f	1mj3F02	F:233-289

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: ClpP_crotonase (88)

Family: ECH (52)

Rattus norvegicus (Rat) (3)

1a	ECH-1mj3F01	F:40-282
1b	ECH-1mj3F02	F:40-282
1c	ECH-1mj3F03	F:40-282
1d	ECH-1mj3F04	F:40-282
1e	ECH-1mj3F05	F:40-282
1f	ECH-1mj3F06	F:40-282

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B,C,D,E,F (ECHM_RAT | P14604)

molecular function
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0004300	enoyl-CoA hydratase activity	Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2-enoyl-CoA + H2O.
	GO:0016829	lyase activity	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
biological process
	GO:0006635	fatty acid beta-oxidation	A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).
	GO:0006631	fatty acid metabolic process	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
	GO:0006629	lipid metabolic process	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
	GO:0005759	mitochondrial matrix	The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

Asymmetric/Biological Unit
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	1mj3
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	4.2.1.17
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	ECHM_RAT \| P14604	:	1dub 1ey3 2dub

1dub	2-ENOYL-COA HYDRATASE, DATA COLLECTED AT 100 K, PH 6.5
1ey3	STRUCTURE OF ENOYL-COA HYDRATASE COMPLEXED WITH THE SUBSTRATE DAC-COA
2dub	ENOYL-COA HYDRATASE COMPLEXED WITH OCTANOYL-COA

Description

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Ligands, Modified Residues, Ions (1, 5)

Sites (5, 5)

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Exons (7, 42)

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