2DUB - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   ENOYL-COA HYDRATASE COMPLEXED WITH OCTANOYL-COA

Authors :   C. K. Engel, R. K. Wierenga

Date :   28 Apr 97 (Deposition) - 29 Apr 98 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.40

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F  (1x)
Biol. Unit 2: A (1x),B (1x),C (1x),D (1x),E (1x),F (1x)

Keywords :   Lyase, Hydratase, B-Oxidation, Fatty Acid Degradation, Coa, Ligand Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. K. Engel, T. R. Kiema, J. K. Hiltunen, R. K. Wierenga
The Crystal Structure Of Enoyl-Coa Hydratase Complexed With Octanoyl-Coa Reveals The Structural Adaptations Required For Binding Of A Long Chain Fatty Acid-Coa Molecule.
J. Mol. Biol. V. 275 847 1998
PubMed-ID: 9480773 | Reference-DOI: 10.1006/JMBI.1997.1491
(for further references see the PDB file header)

Molecule 1 - 2-ENOYL-COA HYDRATASE
	Cellular Location	:	MITOCHONDRIA
	Chains	:	A, B, C, D, E, F
	EC Number	:	4.2.1.17
	Organ	:	LIVER
	Organism Common	:	NORWAY RAT
	Organism Scientific	:	RATTUS NORVEGICUS
	Organism Taxid	:	10116
	Other Details	:	COCRYSTALLIZED WITH OCTANOYL-COA
	Synonym	:	CROTONASE, ENOYL-COA HYDRATASE 1

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:	A	B	C	D	E	F
Biological Unit 2 (1x)	:	A (1x)	B (1x)	C (1x)	D (1x)	E (1x)	F (1x)

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 4)

No.	Name	Count	Type	Full Name
1	CO8	4	Ligand/Ion	OCTANOYL-COENZYME A

Biological Unit 1 (1, 4)

No.	Name	Count	Type	Full Name
1	CO8	4	Ligand/Ion	OCTANOYL-COENZYME A

Biological Unit 2 (1, 2)

No.	Name	Count	Type	Full Name
1	CO8	2	Ligand/Ion	OCTANOYL-COENZYME A

Asymmetric Unit (10, 10)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	LYS A:56 , ALA A:57 , LEU A:58 , LYS A:92 , ALA A:96 , ALA A:98 , ASP A:99 , ILE A:100 , LYS A:101 , LEU A:139 , GLY A:140 , GLY A:141 , GLU A:144 , PRO A:163 , GLU A:164 , LEU A:167 , GLY A:172 , ARG A:197 , HOH A:301 , LYS B:260 , PHE B:279 , LYS B:282 , HOH B:352 , CO8 E:300 , LYS F:282	BINDING SITE FOR RESIDUE CO8 A 300
02	AC2	SOFTWARE	LYS B:56 , ALA B:57 , LEU B:58 , ALA B:60 , LYS B:92 , ALA B:96 , GLY B:97 , ALA B:98 , ASP B:99 , ILE B:100 , LYS B:101 , LEU B:139 , GLY B:140 , GLY B:141 , GLU B:144 , PRO B:163 , GLU B:164 , LEU B:167 , GLY B:172 , ALA B:173 , ARG B:197 , LYS C:260 , PHE C:279 , LYS C:282	BINDING SITE FOR RESIDUE CO8 B 300
03	AC3	SOFTWARE	CO8 A:300 , LYS B:282 , LYS E:56 , ALA E:57 , LEU E:58 , LYS E:92 , ALA E:96 , ALA E:98 , ASP E:99 , ILE E:100 , LYS E:101 , LEU E:139 , GLY E:140 , GLY E:141 , GLU E:144 , PRO E:163 , GLU E:164 , LEU E:167 , GLY E:172 , ARG E:197 , HOH E:319 , LYS F:260 , PHE F:279 , LYS F:282	BINDING SITE FOR RESIDUE CO8 E 300
04	AC4	SOFTWARE	PHE D:279 , LYS D:282 , LYS F:56 , LEU F:58 , LYS F:92 , ALA F:96 , ALA F:98 , ASP F:99 , ILE F:100 , LYS F:101 , TYR F:137 , LEU F:139 , GLY F:141 , GLU F:144 , PRO F:163 , GLU F:164 , LEU F:167 , GLY F:172 , ARG F:197	BINDING SITE FOR RESIDUE CO8 F 300
05	ACA	UNKNOWN	GLU A:144 , GLU A:164	CATALYTIC RESIDUES OF THE ACTIVE SITE.
06	ACB	UNKNOWN	GLU B:144 , GLU B:164	CATALYTIC RESIDUES OF THE ACTIVE SITE.
07	ACC	UNKNOWN	GLU C:144 , GLU C:164	CATALYTIC RESIDUES OF THE ACTIVE SITE.
08	ACD	UNKNOWN	GLU D:144 , GLU D:164	CATALYTIC RESIDUES OF THE ACTIVE SITE.
09	ACE	UNKNOWN	GLU E:144 , GLU E:164	CATALYTIC RESIDUES OF THE ACTIVE SITE.
10	ACF	UNKNOWN	GLU F:144 , GLU F:164	CATALYTIC RESIDUES OF THE ACTIVE SITE.

(no "SS Bond" information available for 2DUB)

(no "Cis Peptide Bond" information available for 2DUB)

(no "SAP(SNP)/Variant" information available for 2DUB)

Asymmetric Unit (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ENOYL_COA_HYDRATASE	PS00166	Enoyl-CoA hydratase/isomerase signature.	ECHM_RAT	131-151	6	A:131-151 B:131-151 C:131-151 D:131-151 E:131-151 F:131-151

Biological Unit 1 (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ENOYL_COA_HYDRATASE	PS00166	Enoyl-CoA hydratase/isomerase signature.	ECHM_RAT	131-151	6	A:131-151 B:131-151 C:131-151 D:131-151 E:131-151 F:131-151

Biological Unit 2 (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ENOYL_COA_HYDRATASE	PS00166	Enoyl-CoA hydratase/isomerase signature.	ECHM_RAT	131-151	6	A:131-151 B:131-151 C:131-151 D:131-151 E:131-151 F:131-151

Asymmetric Unit (7, 42)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSRNOT00000025446	1	ENSRNOE00000179019	chr1:199910412-199910308	105	ECHM_RAT	1-30	30	0	-	-
1.2	ENSRNOT00000025446	2	ENSRNOE00000180786	chr1:199908251-199908054	198	ECHM_RAT	30-96	67	6	A:32-96 B:32-96 C:32-96 D:31-96 E:31-96 F:31-96	65 65 65 66 66 66
1.3	ENSRNOT00000025446	3	ENSRNOE00000180948	chr1:199907664-199907537	128	ECHM_RAT	96-138	43	6	A:96-138 (gaps) B:96-138 (gaps) C:96-138 (gaps) D:96-138 (gaps) E:96-138 (gaps) F:96-138 (gaps)	43 43 43 43 43 43
1.4	ENSRNOT00000025446	4	ENSRNOE00000181097	chr1:199906925-199906826	100	ECHM_RAT	139-172	34	6	A:139-172 B:139-172 C:139-172 D:139-172 E:139-172 F:139-172	34 34 34 34 34 34
1.5	ENSRNOT00000025446	5	ENSRNOE00000181259	chr1:199905995-199905891	105	ECHM_RAT	172-207	36	6	A:172-207 B:172-207 C:172-207 D:172-207 E:172-207 F:172-207	36 36 36 36 36 36
1.6	ENSRNOT00000025446	6	ENSRNOE00000179510	chr1:199905454-199905335	120	ECHM_RAT	207-247	41	6	A:207-247 B:207-247 C:207-247 D:207-247 E:207-247 F:207-247	41 41 41 41 41 41
1.7	ENSRNOT00000025446	7	ENSRNOE00000181392	chr1:199903551-199903484	68	ECHM_RAT	247-269	23	6	A:247-269 B:247-269 C:247-269 D:247-269 E:247-269 F:247-269	23 23 23 23 23 23
1.8	ENSRNOT00000025446	8	ENSRNOE00000181536	chr1:199902222-199901588	635	ECHM_RAT	270-290	21	6	A:270-290 B:270-290 C:270-290 D:270-290 E:270-290 F:270-290	21 21 21 21 21 21

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:254
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:259
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281         
             ECHM_RAT    32 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d2duba_ A: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                          SCOP domains
               CATH domains 2dubA01 A:32-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                2dubA02 A:233-289                                        - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee.hhh.eeeeee..hhh.....hhhhhhhhhhhhhhhh.....eeeee...........hhhh....hhhh..-----...hhhh...eeeeee..eeehhhhhhhhh..eeeee...eee.hhhhh..........hhhhhh.hhhhhhhhhh..eeehhhhhhh....eee....hhhhhhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: A:32-96 UniProt: 30-96 [INCOMPLETE]               ------------------------------------------Exon 1.4  PDB: A:139-172          ----------------------------------Exon 1.6  PDB: A:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------Exon 1.3  PDB: A:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: A:172-207            ---------------------------------------Exon 1.7  PDB: A:247-26--------------------- Transcript 1 (2)
                 2dub A  32 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYS-----HWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    41        51        61        71        81        91       101       111 |     121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281         
                                                                                                           113   119

Chain B from PDB  Type:PROTEIN  Length:254
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:259
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281         
             ECHM_RAT    32 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d2dubb_ B: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                          SCOP domains
               CATH domains 2dubB01 B:32-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                2dubB02 B:233-289                                        - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee.hhh.eeeeee..hhh.....hhhhhhhhhhhhhhhh.....eeeee...........hhhh....hhhhh.-----...hhhh...eeeeee..eeehhhhhhhhh..eeeee...eee.hhhhh..........hhhhhh.hhhhhhhhhh..eeehhhhhhh....eee....hhhhhhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: B:32-96 UniProt: 30-96 [INCOMPLETE]               ------------------------------------------Exon 1.4  PDB: B:139-172          ----------------------------------Exon 1.6  PDB: B:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------Exon 1.3  PDB: B:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: B:172-207            ---------------------------------------Exon 1.7  PDB: B:247-26--------------------- Transcript 1 (2)
                 2dub B  32 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYS-----HWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    41        51        61        71        81        91       101       111 |     121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281         
                                                                                                           113   119

Chain C from PDB  Type:PROTEIN  Length:254
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:259
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281         
             ECHM_RAT    32 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d2dubc_ C: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                          SCOP domains
               CATH domains 2dubC01 C:32-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                2dubC02 C:233-289                                        - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee.hhh.eeeeee..hhh.....hhhhhhhhhhhhhhhh.....eeeee...........hhhh....hhhh..-----...hhhh...eeeeee..eeehhhhhhhhh..eeeee...eee.hhhhh..........hhhhhh.hhhhhhhhhh..eeehhhhhhh....eee....hhhhhhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: C:32-96 UniProt: 30-96 [INCOMPLETE]               ------------------------------------------Exon 1.4  PDB: C:139-172          ----------------------------------Exon 1.6  PDB: C:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------Exon 1.3  PDB: C:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: C:172-207            ---------------------------------------Exon 1.7  PDB: C:247-26--------------------- Transcript 1 (2)
                 2dub C  32 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYS-----HWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    41        51        61        71        81        91       101       111 |     121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281         
                                                                                                           113   119

Chain D from PDB  Type:PROTEIN  Length:257
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:260
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
             ECHM_RAT    31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d2dubd_ D: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                           SCOP domains
               CATH domains 2dubD01 D:31-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                 2dubD02 D:233-289                                        - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee.hhh.eeeeee..hhh.....hhhhhhhhhhhhhhhh.....eeeee...........hhhh....hhhhhhh.---...hhhh...eeeeee..eeehhhhhhhhh..eeeee...eee.hhhhh.......hhhhhhhhh.hhhhhhhhhh..eeehhhhhhh....eee....hhhhhhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: D:31-96 UniProt: 30-96 [INCOMPLETE]                ------------------------------------------Exon 1.4  PDB: D:139-172          ----------------------------------Exon 1.6  PDB: D:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------Exon 1.3  PDB: D:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: D:172-207            ---------------------------------------Exon 1.7  PDB: D:247-26--------------------- Transcript 1 (2)
                 2dub D  31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGK---HWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    40        50        60        70        80        90       100       110    |  120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
                                                                                                              115 119

Chain E from PDB  Type:PROTEIN  Length:255
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:260
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
             ECHM_RAT    31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d2dube_ E: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                           SCOP domains
               CATH domains 2dubE01 E:31-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                 2dubE02 E:233-289                                        - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee.hhh.eeeeee..hhh.....hhhhhhhhhhhhhhhh.....eeeee...........hhhh....hhhhh.-----...hhhh...eeeeee..eee.hhhhhhhh..eeeee...eee.hhhhh..........hhhhhh.hhhhhhhhhh..eeehhhhhhh....eee....hhhhhhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: E:31-96 UniProt: 30-96 [INCOMPLETE]                ------------------------------------------Exon 1.4  PDB: E:139-172          ----------------------------------Exon 1.6  PDB: E:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------Exon 1.3  PDB: E:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: E:172-207            ---------------------------------------Exon 1.7  PDB: E:247-26--------------------- Transcript 1 (2)
                 2dub E  31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYS-----HWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    40        50        60        70        80        90       100       110  |    120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
                                                                                                            113   119

Chain F from PDB  Type:PROTEIN  Length:255
 aligned with ECHM_RAT | P14604 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:260
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
             ECHM_RAT    31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
               SCOP domains d2dubf_ F: Enoyl-CoA hydratase (crotonase)                                                                                                                                                                                                                           SCOP domains
               CATH domains 2dubF01 F:31-232 2-enoyl-CoA Hydratase; Chain A, domain 1                                                                                                                                                 2dubF02 F:233-289                                        - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee.hhh.eeeeee..hhh.....hhhhhhhhhhhhhhhh.....eeeee...........hhhh....hhhhh.-----...hhhh...eeeeee..eeehhhhhhhhh..eeeee...eee.hhhhh..........hhhhhh.hhhhhhhhhh..eeehhhhhhh....eee....hhhhhhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------ENOYL_COA_HYDRATASE  ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: F:31-96 UniProt: 30-96 [INCOMPLETE]                ------------------------------------------Exon 1.4  PDB: F:139-172          ----------------------------------Exon 1.6  PDB: F:207-247 UniProt: 207-247----------------------Exon 1.8              Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------Exon 1.3  PDB: F:96-138 (gaps)             ---------------------------------Exon 1.5  PDB: F:172-207            ---------------------------------------Exon 1.7  PDB: F:247-26--------------------- Transcript 1 (2)
                 2dub F  31 ANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYS-----HWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFKDH 290
                                    40        50        60        70        80        90       100       110  |    120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
                                                                                                            113   119

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

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Folds(

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Superfamilies( (-)

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Families(

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Protein Domains( (-)

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Organisms( (-)

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Class: Alpha and beta proteins (a/b) (23833)

Fold: ClpP/crotonase (207)

Superfamily: ClpP/crotonase (207)

Family: Crotonase-like (39)

Protein domain: Enoyl-CoA hydratase (crotonase) (5)

Norway rat (Rattus norvegicus) [TaxId: 10116] (4)

1a	d2duba_	A:
1b	d2dubb_	B:
1c	d2dubc_	C:
1d	d2dubd_	D:
1e	d2dube_	E:
1f	d2dubf_	F:

Asymmetric Unit

Classes(

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Architectures( (-)

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Topologies( (-)

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Homologous Superfamilies( (-)

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Organisms( (-)

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Class: Alpha Beta (26913)

Architecture: Alpha-Beta Complex (3881)

Topology: 2-enoyl-CoA Hydratase; Chain A, domain 1 (89)

Homologous Superfamily: 2-enoyl-CoA Hydratase; Chain A, domain 1 (89)

Norway rat (Rattus norvegicus) (6)

1a	2dubD01	D:31-232
1b	2dubE01	E:31-232
1c	2dubF01	F:31-232
1d	2dubA01	A:32-232
1e	2dubB01	B:32-232
1f	2dubC01	C:32-232

Class: Mainly Alpha (13335)

Architecture: Orthogonal Bundle (10391)

Topology: Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 (25)

Homologous Superfamily: Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 (25)

Norway rat (Rattus norvegicus) (5)

2a	2dubA02	A:233-289
2b	2dubB02	B:233-289
2c	2dubC02	C:233-289
2d	2dubD02	D:233-289
2e	2dubE02	E:233-289
2f	2dubF02	F:233-289

(no "Pfam Domain" information available for 2DUB)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (ECHM_RAT | P14604)

molecular function
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0004300	enoyl-CoA hydratase activity	Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2-enoyl-CoA + H2O.
	GO:0016829	lyase activity	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
biological process
	GO:0006635	fatty acid beta-oxidation	A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).
	GO:0006631	fatty acid metabolic process	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
	GO:0006629	lipid metabolic process	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
	GO:0005759	mitochondrial matrix	The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

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	2dub
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	ECHM_RAT \| P14604	:	1dub 1ey3 1mj3

(no "Related Entries Specified in the PDB File" available for 2DUB)

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