Chain A from PDB Type:PROTEIN Length:72
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:72
81
21 31 41 51 61 71 81
RUXX_METTH 12 QRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP-- -
SCOP domains d1jria_ A: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriA00 A:12-83 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhh..eeeeee....eeeeeeeee.....eeeeeeeeee..eeeeeeeeeee....eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------ Transcript
1jri A 12 QRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGK 83
21 31 41 51 61 71 81
Chain B from PDB Type:PROTEIN Length:74
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:74
81
21 31 41 51 61 71 81
RUXX_METTH 12 QRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP---- -
SCOP domains d1jrib_ B: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriB00 B:12-85 [code=2.30.30.100, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhh....eeeeee...eeeeeeeeee.....eeeeeeeeee..eeeeeeeeeee....eeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------- Transcript
1jri B 12 QRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGKLA 85
21 31 41 51 61 71 81
Chain C from PDB Type:PROTEIN Length:75
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:75
81
18 28 38 48 58 68 78 |
RUXX_METTH 9 VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP-- -
SCOP domains d1jric_ C: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriC00 C:9-83 [code=2.30.30.100, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh....eeeeee....eeeeeeeee.....eeeeeeeeee..eeeeeeeeeee....eeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------- Transcript
1jri C 9 VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGK 83
18 28 38 48 58 68 78
Chain D from PDB Type:PROTEIN Length:73
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:73
81
20 30 40 50 60 70 80|
RUXX_METTH 11 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP-- -
SCOP domains d1jrid_ D: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriD00 D:11-83 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhh....eeeeee....eeeeeeeee.....eeeeeeeee....eeeeeeeeee....eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
1jri D 11 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGK 83
20 30 40 50 60 70 80
Chain E from PDB Type:PROTEIN Length:74
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:74
81
18 28 38 48 58 68 78 |
RUXX_METTH 9 VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP- -
SCOP domains d1jrie_ E: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriE00 E:9-82 [code=2.30.30.100, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhh...eeeeee....eeeeeeeee.....eeeeeeeeee..eeeeeeeeeee....eeeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------- Transcript
1jri E 9 VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRG 82
18 28 38 48 58 68 78
Chain F from PDB Type:PROTEIN Length:73
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:73
81
20 30 40 50 60 70 80|
RUXX_METTH 11 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP-- -
SCOP domains d1jrif_ F: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriF00 F:11-83 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhh....eeeeee....eeeeeeeee.....eeeeeeeeee..eeeeeeeeeee....eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
1jri F 11 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGK 83
20 30 40 50 60 70 80
Chain G from PDB Type:PROTEIN Length:76
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:76
81
18 28 38 48 58 68 78 |
RUXX_METTH 9 VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP--- -
SCOP domains d1jrig_ G: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriG00 G:9-84 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh....eeeeee...eeeeeeeeee.....eeeeeeeeee..eeeeeeeeeee....eeeee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------- Transcript
1jri G 9 VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGKL 84
18 28 38 48 58 68 78
Chain H from PDB Type:PROTEIN Length:73
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:73
81
19 29 39 49 59 69 79 |
RUXX_METTH 10 NVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP- -
SCOP domains d1jrih_ H: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriH00 H:10-82 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhh...eeeeee....eeeeeeeee.....eeeeeeeee....eeeeeeeeee....eeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
1jri H 10 NVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRG 82
19 29 39 49 59 69 79
Chain I from PDB Type:PROTEIN Length:72
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:72
81
21 31 41 51 61 71 81
RUXX_METTH 12 QRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP-- -
SCOP domains d1jrii_ I: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriI00 I:12-83 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...hhhhhhhh..eeeeee....eeeeeeeee.....eeeeeeeee....eeeeeeeeee....eeeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------ Transcript
1jri I 12 QRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGK 83
21 31 41 51 61 71 81
Chain J from PDB Type:PROTEIN Length:71
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:71
19 29 39 49 59 69 79
RUXX_METTH 10 NVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYIS 80
SCOP domains d1jrij_ J: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriJ00 J:10-80 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhh....eeeeee....eeeeeeeee.....eeeeeeeee....eeeeeeeeee....eeeee Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------- Transcript
1jri J 10 NVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYIS 80
19 29 39 49 59 69 79
Chain K from PDB Type:PROTEIN Length:71
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:71
20 30 40 50 60 70 80
RUXX_METTH 11 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP 81
SCOP domains d1jrik_ K: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriK00 K:11-81 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.........eeeeeee....eeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------- Transcript
1jri K 11 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISR 81
20 30 40 50 60 70 80
Chain L from PDB Type:PROTEIN Length:76
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:76
81
18 28 38 48 58 68 78 |
RUXX_METTH 9 VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP--- -
SCOP domains d1jril_ L: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriL00 L:9-84 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh....eeeeee....eeeeeeeee.....eeeeeeeeee..eeeeeeeeeee....eeeeee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------- Transcript
1jri L 9 VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGKL 84
18 28 38 48 58 68 78
Chain M from PDB Type:PROTEIN Length:74
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:74
81
21 31 41 51 61 71 81
RUXX_METTH 12 QRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP---- -
SCOP domains d1jrim_ M: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriM00 M:12-85 [code=2.30.30.100, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhh....eeeeee....eeeeeeeee.....eeeeeeeeee..eeeeeeeeeee....eeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------- Transcript
1jri M 12 QRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGKLA 85
21 31 41 51 61 71 81
Chain N from PDB Type:PROTEIN Length:75
aligned with RUXX_METTH | O26745 from UniProtKB/Swiss-Prot Length:81
Alignment length:75
81
18 28 38 48 58 68 78 |
RUXX_METTH 9 VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISP-- -
SCOP domains d1jrin_ N: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1jriN00 N:9-83 [code=2.30.30.100, no name defined] CATH domains
Pfam domains (1) -------LSM-1jriN01 N:16-80 --- Pfam domains (1)
Pfam domains (2) -------LSM-1jriN02 N:16-80 --- Pfam domains (2)
Pfam domains (3) -------LSM-1jriN03 N:16-80 --- Pfam domains (3)
Pfam domains (4) -------LSM-1jriN04 N:16-80 --- Pfam domains (4)
Pfam domains (5) -------LSM-1jriN05 N:16-80 --- Pfam domains (5)
Pfam domains (6) -------LSM-1jriN06 N:16-80 --- Pfam domains (6)
Pfam domains (7) -------LSM-1jriN07 N:16-80 --- Pfam domains (7)
Pfam domains (8) -------LSM-1jriN08 N:16-80 --- Pfam domains (8)
Pfam domains (9) -------LSM-1jriN09 N:16-80 --- Pfam domains (9)
Pfam domains (10) -------LSM-1jriN10 N:16-80 --- Pfam domains (10)
Pfam domains (11) -------LSM-1jriN11 N:16-80 --- Pfam domains (11)
Pfam domains (12) -------LSM-1jriN12 N:16-80 --- Pfam domains (12)
Pfam domains (13) -------LSM-1jriN13 N:16-80 --- Pfam domains (13)
Pfam domains (14) -------LSM-1jriN14 N:16-80 --- Pfam domains (14)
Sec.struct. author .....hhhhhhh....eeeeee....eeeeeeeee.....eeeeeeeeee..eeeeeeeeeee....eeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------- Transcript
1jri N 9 VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGK 83
18 28 38 48 58 68 78
Legend: |
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |