4UBT - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   STRUCTURE OF THE C93S VARIANT OF THE 3-KETOACYL-COA THIOLASE FADA5 FROM M. TUBERCULOSIS IN COMPLEX WITH A STEROID AND COA.

Authors :   C. M. Schaefer, C. Kisker

Date :   13 Aug 14 (Deposition) - 17 Dec 14 (Release) - 14 Jan 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.70

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C (1x),D (1x)
Biol. Unit 3: C (1x),D (1x)

Keywords :   Degradative Thiolase, Steroid-Complex, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. M. Schaefer, R. Lu, N. M. Nesbitt, J. Schiebel, N. S. Sampson, C. Kisker
Fada5 A Thiolase From Mycobacterium Tuberculosis: A Steroid-Binding Pocket Reveals The Potential For Drug Development Against Tuberculosis.
Structure V. 23 21 2015
PubMed-ID: 25482540 | Reference-DOI: 10.1016/J.STR.2014.10.010

Molecule 1 - ACETYL-COA ACETYLTRANSFERASE FADA5
	Chains	:	A, B, C, D
	EC Number	:	2.3.1.16
	Engineered	:	YES
	Expression System	:	MYCOBACTERIUM SMEGMATIS STR. MC2 155
	Expression System Plasmid	:	PSD31
	Expression System Taxid	:	246196
	Gene	:	FADA5, RV3546, P425_03688, RVBD_3546
	Mutation	:	YES
	Organism Scientific	:	MYCOBACTERIUM TUBERCULOSIS
	Organism Taxid	:	83332
	Other Details	:	C93S VARIANT OF FADA5 IN COMPLEX WITH A STEROID-COA
	Strain	:	ATCC 25618 / H37RV
	Synonym	:	PROBABLE ACETYL-COA ACETYLTRANSFERASE FADA5 (ACETOACETYL-COA THIOLASE)

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C (1x)	D (1x)
Biological Unit 3 (1x)	:			C (1x)	D (1x)

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (6, 24)

No.	Name	Count	Type	Full Name
1	3G6	3	Ligand/Ion	(2S)-2-[(8S,9S,10R,13S,14S,17R)-10,13-DIMETHYL-3-OXO-2,3,6,7,8,9,10,11,12,13,14,15,16,17-TETRADECAHYDRO-1H-CYCLOPENTA[A]PHENANTHREN-17-YL]PROPANOIC ACID (NON-PREFERRED NAME)
2	CL	10	Ligand/Ion	CHLORIDE ION
3	COA	4	Ligand/Ion	COENZYME A
4	GOL	5	Ligand/Ion	GLYCEROL
5	NA	1	Ligand/Ion	SODIUM ION
6	PEG	1	Ligand/Ion	DI(HYDROXYETHYL)ETHER

Biological Unit 1 (3, 7)

No.	Name	Count	Type	Full Name
1	3G6	2	Ligand/Ion	(2S)-2-[(8S,9S,10R,13S,14S,17R)-10,13-DIMETHYL-3-OXO-2,3,6,7,8,9,10,11,12,13,14,15,16,17-TETRADECAHYDRO-1H-CYCLOPENTA[A]PHENANTHREN-17-YL]PROPANOIC ACID (NON-PREFERRED NAME)
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	COA	2	Ligand/Ion	COENZYME A
4	GOL	3	Ligand/Ion	GLYCEROL
5	NA	-1	Ligand/Ion	SODIUM ION
6	PEG	-1	Ligand/Ion	DI(HYDROXYETHYL)ETHER

Biological Unit 2 (4, 4)

No.	Name	Count	Type	Full Name
1	3G6	1	Ligand/Ion	(2S)-2-[(8S,9S,10R,13S,14S,17R)-10,13-DIMETHYL-3-OXO-2,3,6,7,8,9,10,11,12,13,14,15,16,17-TETRADECAHYDRO-1H-CYCLOPENTA[A]PHENANTHREN-17-YL]PROPANOIC ACID (NON-PREFERRED NAME)
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	COA	1	Ligand/Ion	COENZYME A
4	GOL	1	Ligand/Ion	GLYCEROL
5	NA	-1	Ligand/Ion	SODIUM ION
6	PEG	1	Ligand/Ion	DI(HYDROXYETHYL)ETHER

Biological Unit 3 (2, 2)

No.	Name	Count	Type	Full Name
1	3G6	-1	Ligand/Ion	(2S)-2-[(8S,9S,10R,13S,14S,17R)-10,13-DIMETHYL-3-OXO-2,3,6,7,8,9,10,11,12,13,14,15,16,17-TETRADECAHYDRO-1H-CYCLOPENTA[A]PHENANTHREN-17-YL]PROPANOIC ACID (NON-PREFERRED NAME)
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	COA	1	Ligand/Ion	COENZYME A
4	GOL	1	Ligand/Ion	GLYCEROL
5	NA	-1	Ligand/Ion	SODIUM ION
6	PEG	-1	Ligand/Ion	DI(HYDROXYETHYL)ETHER

Asymmetric Unit (24, 24)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLN A:151 , PHE A:152 , ARG A:221 , THR A:223 , LEU A:231 , ALA A:242 , SER A:246 , 3G6 A:402 , HOH A:538 , HOH A:551 , HOH A:569 , HOH A:581 , HOH A:617 , HOH A:622 , HOH A:634 , HOH A:696 , HOH A:701	binding site for residue COA A 401
02	AC2	SOFTWARE	GLN A:92 , SER A:93 , ARG A:136 , GLN A:151 , ALA A:378 , GLY A:379 , COA A:401 , HOH A:634 , ASN B:68	binding site for residue 3G6 A 402
03	AC3	SOFTWARE	SER A:22 , SER A:124 , ARG A:125 , ASN A:205	binding site for residue GOL A 403
04	AC4	SOFTWARE	TRP A:184 , ASP A:190 , ARG A:216	binding site for residue GOL A 404
05	AC5	SOFTWARE	ARG A:212 , LEU A:213 , VAL A:214 , PHE A:215 , HOH A:503 , HOH A:507	binding site for residue GOL A 405
06	AC6	SOFTWARE	GLY A:229	binding site for residue CL A 406
07	AC7	SOFTWARE	HIS A:48 , ALA A:49 , HOH A:668	binding site for residue CL A 407
08	AC8	SOFTWARE	GLN B:151 , PHE B:152 , ARG B:221 , THR B:223 , LEU B:231 , ALA B:242 , SER B:246 , ILE B:248 , ALA B:317 , PHE B:318 , 3G6 B:402 , HOH B:519 , HOH B:520 , HOH B:529 , HOH B:531 , HOH B:565 , HOH B:631 , HOH B:642 , HOH B:654 , HOH B:689 , HOH B:743 , HOH B:808	binding site for residue COA B 401
09	AC9	SOFTWARE	GLN B:92 , SER B:93 , ARG B:136 , ILE B:139 , GLN B:151 , ALA B:378 , GLY B:379 , COA B:401	binding site for residue 3G6 B 402
10	AD1	SOFTWARE	HOH B:564 , HOH B:638	binding site for residue CL B 403
11	AD2	SOFTWARE	HIS B:48 , GLY B:50 , PRO B:81 , HIS B:83	binding site for residue CL B 404
12	AD3	SOFTWARE	ARG B:212 , LEU B:213 , HOH C:688	binding site for residue CL B 405
13	AD4	SOFTWARE	THR B:223	binding site for residue CL B 406
14	AD5	SOFTWARE	ARG B:140 , ILE B:146 , LEU B:148	binding site for residue CL B 407
15	AD6	SOFTWARE	GLN C:92 , SER C:93 , ARG C:136 , ILE C:139 , GLN C:151 , ALA C:378 , GLY C:379 , COA C:402 , HOH C:621	binding site for residue 3G6 C 401
16	AD7	SOFTWARE	GLN C:151 , PHE C:152 , ARG C:221 , THR C:223 , LEU C:231 , ALA C:242 , SER C:246 , ILE C:248 , 3G6 C:401 , HOH C:558 , HOH C:566 , HOH C:572 , HOH C:604 , HOH C:614 , HOH C:621 , HOH C:630	binding site for residue COA C 402
17	AD8	SOFTWARE	TRP B:184 , ASP B:190 , HOH B:645 , ASP C:190 , PRO C:195 , PHE C:215 , HOH C:573 , HOH C:651 , HOH C:665	binding site for residue GOL C 403
18	AD9	SOFTWARE	LEU C:323 , ALA C:326 , ARG C:327 , GLU C:330 , PRO C:331 , HOH C:660	binding site for residue PEG C 404
19	AE1	SOFTWARE	HOH B:634 , GLN C:181 , HOH C:735	binding site for residue CL C 405
20	AE2	SOFTWARE	ASP C:310 , SER C:370	binding site for residue NA C 406
21	AE3	SOFTWARE	SER D:93 , GLN D:151 , PHE D:152 , ARG D:221 , THR D:223 , LEU D:231 , SER D:246 , ALA D:317 , PHE D:318 , HIS D:347 , CL D:404 , HOH D:599 , HOH D:641 , HOH D:663 , HOH D:699 , HOH D:707 , HOH D:754	binding site for residue COA D 401
22	AE4	SOFTWARE	ARG A:264 , THR A:269 , HOH A:502 , GLU D:153 , GLU D:156 , ARG D:157 , LYS D:160 , HOH D:509	binding site for residue GOL D 402
23	AE5	SOFTWARE	SER D:194 , HOH D:575	binding site for residue CL D 403
24	AE6	SOFTWARE	GLN D:92 , SER D:93 , GLY D:379 , COA D:401	binding site for residue CL D 404

(no "SS Bond" information available for 4UBT)

(no "Cis Peptide Bond" information available for 4UBT)

(no "SAP(SNP)/Variant" information available for 4UBT)

(no "PROSITE Motif" information available for 4UBT)

(no "Exon" information available for 4UBT)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:396
                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........eeeeeeee...ee........hhhhhhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhh.hhhhhhhhhh......eeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeee............hhhhhh.........hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh.........eeeeee.....eeeeeeee.........hhhhhhhh.........hhhhh...eeeeeeeeeeehhhhhhh.....eeeeeeeeee........hhhhhhhhhhhhhh.hhhhh.eeee...hhhhhhhhhhhhh.hhhhh....hhhhhh....hhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4ubt A  -4 HHHGSMGYPVIVEATRSPIGKRNGWLSGLHATELLGAVQKAVVDKAGIQSGLHAGDVEQVIGGCVTQFGEQSNNISRVAWLTAGLPEHVGATTVDCQSGSGQQANHLIAGLIAAGAIDVGIACGIEAMSRVGLGANAGPDRSLIRAQSWDIDLPNQFEAAERIAKRRGITREDVDVFGLESQRRAQRAWAEGRFDREISPIQAPVLDEQNQPTGERRLVFRDQGLRETTMAGLGELKPVLEGGIHTAGTSSQISDGAAAVLWMDEAVARAHGLTPRARIVAQALVGAEPYYHLDGPVQSTAKVLEKAGMKIGDIDIVEINEAFASVVLSWARVHEPDMDRVNVNGGAIALGHPVGCTGSRLITTALHELERTDQSLALITMCAGGALSTGTIIERI 391
                                     5        15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385

Chain B from PDB  Type:PROTEIN  Length:392
                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee...ee........hhhhhhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhh.hhhhhhhhhh......eeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeee............hhhhhh.........hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.....eeeeeeee.........hhhhhhh..........hhhhh...eeeeeeeeeeehhhhhhhh....eeeeeeeeee........hhhhhhhhhhhhhh.hhhhh.eeee...hhhhhhhhhhhhh.hhhhh....hhhhhh....hhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ubt B   0 SMGYPVIVEATRSPIGKRNGWLSGLHATELLGAVQKAVVDKAGIQSGLHAGDVEQVIGGCVTQFGEQSNNISRVAWLTAGLPEHVGATTVDCQSGSGQQANHLIAGLIAAGAIDVGIACGIEAMSRVGLGANAGPDRSLIRAQSWDIDLPNQFEAAERIAKRRGITREDVDVFGLESQRRAQRAWAEGRFDREISPIQAPVLDEQNQPTGERRLVFRDQGLRETTMAGLGELKPVLEGGIHTAGTSSQISDGAAAVLWMDEAVARAHGLTPRARIVAQALVGAEPYYHLDGPVQSTAKVLEKAGMKIGDIDIVEINEAFASVVLSWARVHEPDMDRVNVNGGAIALGHPVGCTGSRLITTALHELERTDQSLALITMCAGGALSTGTIIERI 391
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389

Chain C from PDB  Type:PROTEIN  Length:391
                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee...ee........hhhhhhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhh.hhhhhhhhhh......eeeee.hhhhhhhhhhhhhhhhhhh....eeeeeeeee............hhhhhh.........hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.....eeeeeeee.........hhhhhhh..........hhhhh...eeeeeeeeeeehhhhhhh.....eeeeeeeeee........hhhhhhhhhhhhhh.hhhhh.eeee...hhhhhhhhhhhhh.hhhhh....hhhhhh.hhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ubt C   1 MGYPVIVEATRSPIGKRNGWLSGLHATELLGAVQKAVVDKAGIQSGLHAGDVEQVIGGCVTQFGEQSNNISRVAWLTAGLPEHVGATTVDCQSGSGQQANHLIAGLIAAGAIDVGIACGIEAMSRVGLGANAGPDRSLIRAQSWDIDLPNQFEAAERIAKRRGITREDVDVFGLESQRRAQRAWAEGRFDREISPIQAPVLDEQNQPTGERRLVFRDQGLRETTMAGLGELKPVLEGGIHTAGTSSQISDGAAAVLWMDEAVARAHGLTPRARIVAQALVGAEPYYHLDGPVQSTAKVLEKAGMKIGDIDIVEINEAFASVVLSWARVHEPDMDRVNVNGGAIALGHPVGCTGSRLITTALHELERTDQSLALITMCAGGALSTGTIIERI 391
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390

Chain D from PDB  Type:PROTEIN  Length:376
                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee...ee........hhhhhhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhh.hhhhhhhhhh......eeeee.hhhhhhhhhhhhhhhhhhh....eeeeeeeee............hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh........eeeeee.....eeeeeeee.........hhhhhhhh.........hhhhh...eeeeeeeeeeehhhhhhh.....eeeeeeeeee........hhhhhhhhhhhhhh.hhhhh.eeee...hhhhhhhhhhhhh.hhhhh....hhhhhh.hhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ubt D   1 MGYPVIVEATRSPIGKRNGWLSGLHATELLGAVQKAVVDKAGIQSGLHAGDVEQVIGGCVTQFGEQSNNISRVAWLTAGLPEHVGATTVDCQSGSGQQANHLIAGLIAAGAIDVGIACGIEAMSRVGLGANALPNQFEAAERIAKRRGITREDVDVFGLESQRRAQRAWAEGRFDREISPIQAPVLDEQNQPTGERRLVFRDQGLRETTMAGLGELKPVLEGGIHTAGTSSQISDGAAAVLWMDEAVARAHGLTPRARIVAQALVGAEPYYHLDGPVQSTAKVLEKAGMKIGDIDIVEINEAFASVVLSWARVHEPDMDRVNVNGGAIALGHPVGCTGSRLITTALHELERTDQSLALITMCAGGALSTGTIIERI 391
                                    10        20        30        40        50        60        70        80        90       100       110       120       130 ||    155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385      
                                                                                                                                                             132|                                                                                                                                                                                                                                                   
                                                                                                                                                              148

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4UBT)

(no "CATH Domain" information available for 4UBT)

(no "Pfam Domain" information available for 4UBT)

Asymmetric Unit(hide GO term definitions)

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		3G6	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		CL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		COA	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		NA	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		PEG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		AD1	[ RasMol ]	+environment [ RasMol ]
		AD2	[ RasMol ]	+environment [ RasMol ]
		AD3	[ RasMol ]	+environment [ RasMol ]
		AD4	[ RasMol ]	+environment [ RasMol ]
		AD5	[ RasMol ]	+environment [ RasMol ]
		AD6	[ RasMol ]	+environment [ RasMol ]
		AD7	[ RasMol ]	+environment [ RasMol ]
		AD8	[ RasMol ]	+environment [ RasMol ]
		AD9	[ RasMol ]	+environment [ RasMol ]
		AE1	[ RasMol ]	+environment [ RasMol ]
		AE2	[ RasMol ]	+environment [ RasMol ]
		AE3	[ RasMol ]	+environment [ RasMol ]
		AE4	[ RasMol ]	+environment [ RasMol ]
		AE5	[ RasMol ]	+environment [ RasMol ]
		AE6	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 4ubt)

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format \| Biol. Unit 3 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	4ubt
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	FADA5_MYCTU \| I6XHI4
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	2.3.1.16
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	FADA5_MYCTU \| I6XHI4
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	FADA5_MYCTU \| I6XHI4	:	4ubu 4ubv 4ubw

(no "Related Entries Specified in the PDB File" available for 4UBT)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (6, 24)

Sites (24, 24)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (4, 4)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File