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4UBT
Biol. Unit 1
Info
Asym.Unit (534 KB)
Biol.Unit 1 (267 KB)
Biol.Unit 2 (260 KB)
Biol.Unit 3 (261 KB)
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(1)
Title
:
STRUCTURE OF THE C93S VARIANT OF THE 3-KETOACYL-COA THIOLASE FADA5 FROM M. TUBERCULOSIS IN COMPLEX WITH A STEROID AND COA.
Authors
:
C. M. Schaefer, C. Kisker
Date
:
13 Aug 14 (Deposition) - 17 Dec 14 (Release) - 14 Jan 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: C,D (1x)
Keywords
:
Degradative Thiolase, Steroid-Complex, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
C. M. Schaefer, R. Lu, N. M. Nesbitt, J. Schiebel, N. S. Sampson, C. Kisker
Fada5 A Thiolase From Mycobacterium Tuberculosis: A Steroid-Binding Pocket Reveals The Potential For Drug Development Against Tuberculosis.
Structure V. 23 21 2015
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Hetero Components
(3, 7)
Info
All Hetero Components
1a: (2S)-2-[(8S,9S,10R,13S,14S,17R)-10... (3G6a)
1b: (2S)-2-[(8S,9S,10R,13S,14S,17R)-10... (3G6b)
1c: (2S)-2-[(8S,9S,10R,13S,14S,17R)-10... (3G6c)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
2g: CHLORIDE ION (CLg)
2h: CHLORIDE ION (CLh)
2i: CHLORIDE ION (CLi)
2j: CHLORIDE ION (CLj)
3a: COENZYME A (COAa)
3b: COENZYME A (COAb)
3c: COENZYME A (COAc)
3d: COENZYME A (COAd)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
5a: SODIUM ION (NAa)
6a: DI(HYDROXYETHYL)ETHER (PEGa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
3G6
2
Ligand/Ion
(2S)-2-[(8S,9S,10R,13S,14S,17R)-10,13-DIMETHYL-3-OXO-2,3,6,7,8,9,10,11,12,13,14,15,16,17-TETRADECAHYDRO-1H-CYCLOPENTA[A]PHENANTHREN-17-YL]PROPANOIC ACID (NON-PREFERRED NAME)
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
COA
2
Ligand/Ion
COENZYME A
4
GOL
3
Ligand/Ion
GLYCEROL
5
NA
-1
Ligand/Ion
SODIUM ION
6
PEG
-1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD8 (SOFTWARE)
16: AE1 (SOFTWARE)
17: AE4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:151 , PHE A:152 , ARG A:221 , THR A:223 , LEU A:231 , ALA A:242 , SER A:246 , 3G6 A:402 , HOH A:538 , HOH A:551 , HOH A:569 , HOH A:581 , HOH A:617 , HOH A:622 , HOH A:634 , HOH A:696 , HOH A:701
binding site for residue COA A 401
02
AC2
SOFTWARE
GLN A:92 , SER A:93 , ARG A:136 , GLN A:151 , ALA A:378 , GLY A:379 , COA A:401 , HOH A:634 , ASN B:68
binding site for residue 3G6 A 402
03
AC3
SOFTWARE
SER A:22 , SER A:124 , ARG A:125 , ASN A:205
binding site for residue GOL A 403
04
AC4
SOFTWARE
TRP A:184 , ASP A:190 , ARG A:216
binding site for residue GOL A 404
05
AC5
SOFTWARE
ARG A:212 , LEU A:213 , VAL A:214 , PHE A:215 , HOH A:503 , HOH A:507
binding site for residue GOL A 405
06
AC6
SOFTWARE
GLY A:229
binding site for residue CL A 406
07
AC7
SOFTWARE
HIS A:48 , ALA A:49 , HOH A:668
binding site for residue CL A 407
08
AC8
SOFTWARE
GLN B:151 , PHE B:152 , ARG B:221 , THR B:223 , LEU B:231 , ALA B:242 , SER B:246 , ILE B:248 , ALA B:317 , PHE B:318 , 3G6 B:402 , HOH B:519 , HOH B:520 , HOH B:529 , HOH B:531 , HOH B:565 , HOH B:631 , HOH B:642 , HOH B:654 , HOH B:689 , HOH B:743 , HOH B:808
binding site for residue COA B 401
09
AC9
SOFTWARE
GLN B:92 , SER B:93 , ARG B:136 , ILE B:139 , GLN B:151 , ALA B:378 , GLY B:379 , COA B:401
binding site for residue 3G6 B 402
10
AD1
SOFTWARE
HOH B:564 , HOH B:638
binding site for residue CL B 403
11
AD2
SOFTWARE
HIS B:48 , GLY B:50 , PRO B:81 , HIS B:83
binding site for residue CL B 404
12
AD3
SOFTWARE
ARG B:212 , LEU B:213 , HOH C:688
binding site for residue CL B 405
13
AD4
SOFTWARE
THR B:223
binding site for residue CL B 406
14
AD5
SOFTWARE
ARG B:140 , ILE B:146 , LEU B:148
binding site for residue CL B 407
15
AD8
SOFTWARE
TRP B:184 , ASP B:190 , HOH B:645 , ASP C:190 , PRO C:195 , PHE C:215 , HOH C:573 , HOH C:651 , HOH C:665
binding site for residue GOL C 403
16
AE1
SOFTWARE
HOH B:634 , GLN C:181 , HOH C:735
binding site for residue CL C 405
17
AE4
SOFTWARE
ARG A:264 , THR A:269 , HOH A:502 , GLU D:153 , GLU D:156 , ARG D:157 , LYS D:160 , HOH D:509
binding site for residue GOL D 402
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
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Asymmetric Unit 1
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Asym.Unit (534 KB)
Header - Asym.Unit
Biol.Unit 1 (267 KB)
Header - Biol.Unit 1
Biol.Unit 2 (260 KB)
Header - Biol.Unit 2
Biol.Unit 3 (261 KB)
Header - Biol.Unit 3
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