4P6V - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE NA+-TRANSLOCATING NADH: UBIQUINONE OXIDOREDUCTASE FROM VIBRIO CHOLERAE

Authors :   J. Steuber, M. S. Casutt, G. Vohl, T. Vorburger, K. Diederichs, G. Fritz

Date :   25 Mar 14 (Deposition) - 03 Dec 14 (Release) - 24 Dec 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.50

Chains :   Asym./Biol. Unit : A,B,C,D,E,F

Keywords :   Respiratory Complex, Nadh:Ubiquinone Oxidoreductase, Sodium Translocation, Fad, Covalent Fmn, Riboflavin, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. Steuber, G. Vohl, M. S. Casutt, T. Vorburger, K. Diederichs, G. Frit
Structure Of The V. Cholerae Na+-Pumping Nadh:Quinone Oxidoreductase.
Nature V. 516 62 2014
PubMed-ID: 25471880 | Reference-DOI: 10.1038/NATURE14003

Molecule 1 - NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT A
	Chains	:	A
	EC Number	:	1.6.5.-
	Engineered	:	YES
	Expression System	:	VIBRIO CHOLERAE
	Expression System Plasmid	:	PEC422
	Expression System Taxid	:	666
	Gene	:	NQRA, VC_2295
	Organism Scientific	:	VIBRIO CHOLERAE SEROTYPE O1
	Organism Taxid	:	243277
	Other Details	:	HIS6-TAG WAS CLEAVED OFF BY HRV-3C PROTEASE.
	Strain	:	ATCC 39315 / EL TOR INABA N16961
	Synonym	:	NA(+)-TRANSLOCATING NQR SUBUNIT A,NQR COMPLEX SUBUNIT A,NQR- 1 SUBUNIT A

Molecule 2 - NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT B
	Chains	:	B
	EC Number	:	1.6.5.-
	Engineered	:	YES
	Expression System	:	VIBRIO CHOLERAE
	Expression System Plasmid	:	PEC422
	Expression System Taxid	:	666
	Gene	:	NQRB, VC_2294
	Organism Scientific	:	VIBRIO CHOLERAE SEROTYPE O1
	Organism Taxid	:	243277
	Other Details	:	CONTAINS FMN COVALENTLY BOUND TO THREONIN 236.
	Strain	:	ATCC 39315 / EL TOR INABA N16961
	Synonym	:	NA(+)-TRANSLOCATING NQR SUBUNIT B,NQR COMPLEX SUBUNIT B,NQR- 1 SUBUNIT B

Molecule 3 - NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT C
	Chains	:	C
	EC Number	:	1.6.5.-
	Engineered	:	YES
	Expression System	:	VIBRIO CHOLERAE
	Expression System Taxid	:	666
	Gene	:	NQRC, VC_2293
	Organism Scientific	:	VIBRIO CHOLERAE SEROTYPE O1
	Organism Taxid	:	243277
	Other Details	:	CONTAINS FMN COVALENTLY BOUND TO THREONIN 225.
	Strain	:	ATCC 39315 / EL TOR INABA N16961
	Synonym	:	NA(+)-TRANSLOCATING NQR SUBUNIT C,NQR COMPLEX SUBUNIT C,NQR- 1 SUBUNIT C

Molecule 4 - NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT D
	Chains	:	D
	EC Number	:	1.6.5.-
	Engineered	:	YES
	Expression System	:	VIBRIO CHOLERAE
	Expression System Taxid	:	666
	Gene	:	NQRD, VC_2292
	Organism Scientific	:	VIBRIO CHOLERAE SEROTYPE O1
	Organism Taxid	:	243277
	Strain	:	ATCC 39315 / EL TOR INABA N16961
	Synonym	:	NA(+)-TRANSLOCATING NQR SUBUNIT D,NQR COMPLEX SUBUNIT D,NQR- 1 SUBUNIT D

Molecule 5 - NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT E
	Chains	:	E
	EC Number	:	1.6.5.-
	Engineered	:	YES
	Expression System	:	VIBRIO CHOLERAE
	Expression System Taxid	:	666
	Gene	:	NQRE, VC_2291
	Organism Scientific	:	VIBRIO CHOLERAE SEROTYPE O1
	Organism Taxid	:	243277
	Strain	:	ATCC 39315 / EL TOR INABA N16961
	Synonym	:	NA(+)-TRANSLOCATING NQR SUBUNIT E,NQR COMPLEX SUBUNIT E,NQR- 1 SUBUNIT E

Molecule 6 - NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT F
	Chains	:	F
	EC Number	:	1.6.5.-
	Engineered	:	YES
	Expression System	:	VIBRIO CHOLERAE
	Expression System Taxid	:	666
	Gene	:	NQRF, VC_2290
	Organism Scientific	:	VIBRIO CHOLERAE SEROTYPE O1
	Organism Taxid	:	243277
	Strain	:	ATCC 39315 / EL TOR INABA N16961
	Synonym	:	NA(+)-TRANSLOCATING NQR SUBUNIT F,NQR COMPLEX SUBUNIT F,NQR- 1 SUBUNIT F

		1	2	3	4	5	6
Asymmetric/Biological Unit	:	A	B	C	D	E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (6, 7)

No.	Name	Count	Type	Full Name
1	CA	1	Ligand/Ion	CALCIUM ION
2	FAD	1	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
3	FE	1	Ligand/Ion	FE (III) ION
4	FES	1	Ligand/Ion	FE2/S2 (INORGANIC) CLUSTER
5	FMN	2	Ligand/Ion	FLAVIN MONONUCLEOTIDE
6	RBF	1	Ligand/Ion	RIBOFLAVIN

Asymmetric Unit (7, 7)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG B:209 , PHE B:213 , TRP B:226 , THR B:236 , LEU B:238 , GLY B:334 , GLY B:335 , PHE B:338 , MET B:343 , PRO B:379 , GLU B:380 , GLY B:381 , MET B:382 , MET B:383 , LEU B:384	binding site for residue FMN B 600
2	AC2	SOFTWARE	LEU C:145 , TRP C:146 , THR C:173 , LEU C:176 , LYS C:207 , GLY C:223 , ALA C:224 , THR C:225 , LEU C:226 , THR C:227 , CYS D:29 , ALA D:33 , LEU D:183 , PHE E:22 , LEU E:23 , SER E:194	binding site for residue FMN C 301
3	AC3	SOFTWARE	GLN C:93 , HIS C:141 , TRP C:238	binding site for residue CA C 302
4	AC4	SOFTWARE	CYS D:29 , CYS D:112 , CYS E:26 , CYS E:120	binding site for residue FE D 301
5	AC5	SOFTWARE	VAL B:399 , GLU B:402 , LYS E:36	binding site for residue RBF E 201
6	AC6	SOFTWARE	SER F:68 , CYS F:70 , SER F:75 , CYS F:76 , GLY F:77 , CYS F:79 , CYS F:111	binding site for residue FES F 501
7	AC7	SOFTWARE	ARG F:210 , ALA F:211 , TYR F:212 , SER F:213 , ASN F:227 , VAL F:228 , ARG F:229 , ALA F:231 , THR F:232 , PRO F:233 , PRO F:234 , ASN F:237 , VAL F:240 , PRO F:241 , GLY F:243 , GLN F:244 , MET F:245 , SER F:246 , PHE F:406	binding site for residue FAD F 502

(no "SS Bond" information available for 4P6V)

Asymmetric/Biological Unit

No.	Residues
1	Leu A:8	-	Asp A:9
2	Arg A:134	-	Pro A:135
3	His A:215	-	Pro A:216
4	Glu A:389	-	Pro A:390
5	Thr B:197	-	Gly B:198
6	Leu B:224	-	Val B:225
7	Ala B:229	-	Asp B:230
8	Gly B:245	-	Ala B:246
9	Ala B:293	-	Ser B:294
10	Ile B:315	-	Gly B:316
11	Glu B:380	-	Gly B:381
12	Arg B:407	-	Arg B:408
13	Leu D:26	-	Gly D:27
14	Glu D:204	-	Gln D:205
15	Phe E:21	-	Phe E:22
16	Phe E:102	-	Pro E:103

(no "SAP(SNP)/Variant" information available for 4P6V)

(no "PROSITE Motif" information available for 4P6V)

(no "Exon" information available for 4P6V)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:400
                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee............eeeeee.....eeeee.hhh....eee......ee....eeeee......eee....eeeeeeee.hhh.eeeeeeee...........hhhhhhhhhhhhhhhhhhhhhhhhhhee..............eeeee.........hhhhhhhhhhhhhhhhhhhhhhhh..eeeeee............eeeeeee......hhhhhhhhhh........eeeehhhhhhhhhhhhhh....eeeeeee.......eeeeee...hhhhhh........eeeeeee..eeee.hhhhh.......eeeeee................hhhhhhhhhh..hhhhhhhh......hhhhhhhhh.....hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4p6v A   1 MITIKKGLDLPIAGTPSQVISDGKAIKKVALLGEEYVGMRPTMHVRVGDEVKKAQILFEDKKNPGVKFTSPVSGKVVEINRGAKRVLQSVVIEVAGDDQVTFDKFEANQLASLNRDAIKTQLVESGLWTAFRTRPFSKVPAIDSTSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAGLDVLSALTTGKVYVCKKGTSLPRSQQPNVEEHVFDGPHPAGLAGTHMHFLYPVSADHVAWSINYQDVIAVGQLFLTGELYTQRVVSLAGPVVNKPRLVRTVMGASLEQLVDSEIMPGEVRIISGSVLSGTKATGPHAYLGRYHLQVSVLREGPIGNYEKVMPLDMEPTLLLRDLCAGDSDSAVRLGALELDEEDLALCTFVCPGKYEYGQLLRECLDKIEKEG 446
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       376       386       396       406       416       426       436       446
                                                                                                                                                                                                                                                                                                                                                                  329|                                                                      
                                                                                                                                                                                                                                                                                                                                                                   376

Chain B from PDB  Type:PROTEIN  Length:348
                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...............hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh......hhhhhh.hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh......hhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhh..................................hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.....hhhhh.......hhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4p6v B  38 GLVTKRSSHVRDSVDLKRIMIMVWLAVFPAMFWGMYNAGGQAIAALNHLYSGDQLAAIVAGNWHYWLTEMLGGTMGSKMLLGATYFLPIYATVFIVGGFWEVLFCMVRKHEVNEGFFVTSILFALIVPPTLPLWQAALGITFGVVVAKEVFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVWTAADGYSGATALSQWAQGGAGALINIPGSIGEVSTLALMIGAAFIVYMGIASWRIIGGVMIGMILLSTLFNVIGSDTNAMFNMPWHLVLGGFAFGMFFMATDPVSASFTNSGKWAYGILIGVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDHVVVERNIKRRL 409
                                    47        57        67        77        87        97       107    || 123       133       143       153       163       173       183       193       203       213       223       233       243      |269       279       289       299       309       319      |331       341       351       361       371       381       391       401        
                                                                                                    112|                                                                                                                                250|                                                        326|                                                                                
                                                                                                     119                                                                                                                                 267                                                         329

Chain C from PDB  Type:PROTEIN  Length:251
                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhheeeeeee.....ee.......hhhhhhhhhh.eee...........eee.eeeeeeeee..eeeeeeeeeeee....eeeeeeeee.....eeeeeeee......hhhhhhhhhhhhhh..............eee..........eee....hhhhhhhhhhhhhhhh....hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4p6v C   6 DSIKKTLFVVIALSLVCSIIVSAAAVGLRDKQKENAALDKQSKILQVAGIEAKGSKQIVELFNKSIEPRLVDFNTGDFVEGDAANYDQRKAAKEASESIKLTAEQDKAKIQRRANVGVVYLVKDGDKTSKVILPVHGNGLWSMMYAFVAVETDGNTVSGLTYYEQGETPGLGGEVENPAWRAQWVGKKLFDENHKPAIKIVKGGAPQGSEHGVDGLSGATLTSNGVQNTFDFWLGDMGFGPFLTKVRDGGL 256
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255

Chain D from PDB  Type:PROTEIN  Length:179
                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh........hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4p6v D   7 LKKSVLAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIRNVRIIVQMAIIASLVIVVDQILKDISKQLSVFVGLIITNCIVMGRAEAFAPIPSFIDGIGNGLGYGFVLMTVGFFRELLGSGKLFGLEVLPNGLMLLAPSAFFLIGFMIWAIRTFKPEQVEA 208
                                    16        26        36        46        56       |71        81        91|      105       115      |129       139       149       159      |179       189       199         
                                                                                    64|                   91|                       122|                                    166|                               
                                                                                     70                    96                        127                                     177

Chain E from PDB  Type:PROTEIN  Length:189
                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh..........hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4p6v E   4 YISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGIAVIVVLTISVPVNNLVYNLVLKPDALVEFLNFITFIGVIAALVQILEMILDRFFPPLYNALGIFLPLITVNCAIFGGVSFMVQRDYSFAESVVYGFGSGVGWMLAIVALAGIREKMKYSDVPPGLRGLGITFITAGLMALGFMSFSGVQ 197
                                    13        23        33        43        53        63       |78        88        98       108       118       128       138       148       158       168       178       188         
                                                                                              71|                                                                                                                        
                                                                                               77

Chain F from PDB  Type:PROTEIN  Length:407
                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh.........eee.....eee......hhhhhhhhhh...........................hhhhhhhh.................................eeeeeeeeeeeee..eeeeeee.hhhh........eeeeee..eeee.hhh..hhhhhhhhhhhhhhh.eeee...eeeeee.........eeeeeee.............hhhhhhhhhh....eeeeeeee...........eeeeee..hhhhhhhhhhhhhhh......eeeeeee.hhhhh.hhhhhhhhhhhh..eeeeeee...hhhhh...ee.hhhhhhhhhh.....hhhhheeeee.hhhhhhhhhhhhhhhh.hhh.eee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4p6v F   2 STIIFGVVMFTLIILALVLVILFAKSKLVPTGDITISINGDPEKAIVTQPGGKLLTALAGAGVFVSSACGGGGSCGQCRVKIKSGGGDILPTELDHISKGEAREGERLACQVAVKADMDLELPEEIFGVKKWECTVISNDNKATFIKELKLAIPDGESVPFRAGGYIQIEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPGQMSSYIWSLKAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDFGG 408
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4P6V)

(no "CATH Domain" information available for 4P6V)

(no "Pfam Domain" information available for 4P6V)

Asymmetric/Biological Unit(hide GO term definitions)

Asymmetric/Biological Unit
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	Ligands, Modified Residues, Ions
		CA	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		FAD	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
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		AC7	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Ala B:229 - Asp B:230	[ RasMol ]
		Ala B:293 - Ser B:294	[ RasMol ]
		Arg A:134 - Pro A:135	[ RasMol ]
		Arg B:407 - Arg B:408	[ RasMol ]
		Glu A:389 - Pro A:390	[ RasMol ]
		Glu B:380 - Gly B:381	[ RasMol ]
		Glu D:204 - Gln D:205	[ RasMol ]
		Gly B:245 - Ala B:246	[ RasMol ]
		His A:215 - Pro A:216	[ RasMol ]
		Ile B:315 - Gly B:316	[ RasMol ]
		Leu A:8 - Asp A:9	[ RasMol ]
		Leu B:224 - Val B:225	[ RasMol ]
		Leu D:26 - Gly D:27	[ RasMol ]
		Phe E:102 - Pro E:103	[ RasMol ]
		Phe E:21 - Phe E:22	[ RasMol ]
		Thr B:197 - Gly B:198	[ RasMol ]

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Access by PDB/NDB ID
	4p6v
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	NQRA_VIBCH \| Q9KPS1
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	NQRB_VIBCH \| Q9KPS2
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	NQRC_VIBCH \| P0C6E0
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	NQRD_VIBCH \| Q9X4Q6
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	NQRE_VIBCH \| Q9X4Q7
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	NQRF_VIBCH \| Q9X4Q8
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	1.6.5.-
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		Pathway	:	KEGG \| MetaCyc

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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
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Access by UniProt ID/Accession number
	NQRA_VIBCH \| Q9KPS1
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	NQRB_VIBCH \| Q9KPS2
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UniProtKB/Swiss-Prot
	NQRA_VIBCH \| Q9KPS1	:	4u9o 4u9q
	NQRF_VIBCH \| Q9X4Q8	:	4u9u

(no "Related Entries Specified in the PDB File" available for 4P6V)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (6, 7)

Sites (7, 7)

SS Bonds (0, 0)

Cis Peptide Bonds (16, 16)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (17, 67)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File