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(-) Description

Title :  CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED PIZZA7 PROTEIN AFTER HEAT TREATMENT
 
Authors :  A. R. D. Voet, H. Noguchi, C. Addy, D. Simoncini, D. Terada, S. Unzai, S. Y K. Y. J. Zhang, J. R. H. Tame
Date :  17 Jun 14  (Deposition) - 08 Oct 14  (Release) - 05 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.99
Chains :  Asym./Biol. Unit :  A
Keywords :  Computational Protein Design, Self-Assembly, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. R. D. Voet, H. Noguchi, C. Addy, D. Simoncini, D. Terada, S. Unzai, S. Y. Park, K. Y. J. Zhang, J. R. H. Tame
Computational Design Of A Self-Assembling Symmetrical Beta-Propeller Protein.
Proc. Natl. Acad. Sci. Usa V. 111 15102 2014
PubMed-ID: 25288768  |  Reference-DOI: 10.1073/PNAS.1412768111

(-) Compounds

Molecule 1 - PIZZA7H PROTEIN
    Chains: A
    Engineered: YES
    Other Details: THE PROTEIN WAS DESIGNED.
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1IPA1Ligand/IonISOPROPYL ALCOHOL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:11 , ASN A:33 , GLY A:95 , LEU A:96 , ASN A:117BINDING SITE FOR RESIDUE IPA A 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3WWA)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3WWA)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3WWA)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3WWA)

(-) Exons   (0, 0)

(no "Exon" information available for 3WWA)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:251
                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee............ee.....eeeeehhhheeeee.......ee........eeeeee.....eeeee....eeeee.......ee........eeeeee.....eeeee.hhheeeee.......ee........eeeeee.....eeeee.hhheeeee......eee........eeeeee.....eeeee.hhheeeee......eee...........eee.....eeeeehhhheeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3wwa A   1 SNTQTVLPFTGLNTPNGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPNGVAVDSAGTVYVTDHGNNRVVKLAA 251
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3WWA)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3WWA)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3WWA)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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  3wwa
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 3WWA)

(-) Related Entries Specified in the PDB File

3ww7 3ww8 3ww9 3wwb 3wwf