SCOP Search:   
        by sunid, keyword
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(use 'Shift Left-Click' to collapse/expand all levels downwards; use 'Control Left-Click' to collapse/expand all levels upwards)
 
(-)
Class: All alpha proteins (14657)
(-)
Fold: S13-like H2TH domain (119)
(-)
Superfamily: S13-like H2TH domain (119)
(-)
Family: automated matches (1)
(-)
Protein domain: automated matches (1)
(-)
Geobacillus stearothermophilus [TaxId: 1422] (1)
3JR5A:135-228MUTM LESION RECOGNITION CONTROL COMPLEX WITH N174C CROSSLINKING SITE
(-)
Family: Middle domain of MutM-like DNA repair proteins (41)
(-)
Protein domain: DNA repair protein MutM (Fpg) (32)
(-)
Bacillus stearothermophilus [TaxId: 1422] (23)
1L1TA:135-220MUTM (FPG) BOUND TO ABASIC-SITE CONTAINING DNA
1L1ZA:135-222MUTM (FPG) COVALENT-DNA INTERMEDIATE
1L2BA:135-223MUTM (FPG) DNA END-PRODUCT STRUCTURE
1L2CA:135-220MUTM (FPG)-DNA ESTRANGED THYMINE MISMATCH RECOGNITION COMPLEX
1L2DA:135-220MUTM (FPG)-DNA ESTRANGED GUANINE MISMATCH RECOGNITION COMPLEX
1R2YA:135-228MUTM (FPG) BOUND TO 8-OXOGUANINE (OXOG) CONTAINING DNA
1R2ZA:135-228MUTM (FPG) BOUND TO 5,6-DIHYDROURACIL (DHU) CONTAINING DNA
2F5QA:135-228CATALYTICALLY INACTIVE (E3Q) MUTM CROSSLINKED TO OXOG:C CONTAINING DNA CC2
2F5SA:135-228CATALYTICALLY INACTIVE (E3Q) MUTM CROSSLINKED TO OXOG:C CONTAINING DNA CC1
3GPPA:135-216MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC3-T224P COMPLEX
3GPUA:135-216MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC4-LOOP DELETION COMPLEX
3GPXA:135-216SEQUENCE-MATCHED MUTM INTERROGATION COMPLEX 4 (IC4)
3GQ3A:135-214MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC5-LOOP DELETION COMPLEX
3GQ4A:135-228SEQUENCE-MATCHED MUTM LESION RECOGNITION COMPLEX 5 (LRC5)
3GQ5A:135-216SEQUENCE-MATCHED MUTM INTERROGATION COMPLEX 5 (IC5)
3JR4A:135-221MUTM INTERROGATING AN EXTRAHELICAL G
3SASA:135-217MUTM SLANTED COMPLEX 4 WITH R112A MUTATION
3SATA:135-216MUTM SLANTED COMPLEX 6 WITH R112A MUTATION
3SAWA:135-216MUTM SLANTED COMPLEX 8 WITH R112A MUTATION
4G4NA:135-217MUTM CONTAINING M77A MUTATION BOUND TO UNDAMAGED DNA
4G4OA:135-216MUTM CONTAINING M77A MUTATION BOUND TO OXOG-CONTAINING DNA
4G4QA:135-217MUTM CONTAINING F114A MUTATION BOUND TO UNDAMAGED DNA
4G4RA:135-216MUTM CONTAINING F114A MUTATION BOUND TO OXOG-CONTAINING DNA
(-)
Escherichia coli [TaxId: 562] (1)
1K82A:129-216; B:129-216; C:129-216; D:129-216CRYSTAL STRUCTURE OF E.COLI FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FPG) COVALENTLY TRAPPED WITH DNA
(-)
Lactococcus lactis [TaxId: 1358] (7)
1KFVA:132-219; B:132-217CRYSTAL STRUCTURE OF LACTOCOCCUS LACTIS FORMAMIDO-PYRIMIDINE DNA GLYCOSYLASE (ALIAS FPG OR MUTM) NON COVALENTLY BOUND TO AN AP SITE CONTAINING DNA.
1NNJA:132-219CRYSTAL STRUCTURE COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG AND AN ABASIC SITE CONTAINING DNA
1PJIA:132-218CRYSTAL STRUCTURE OF WILD TYPE LACTOCOCCUS LACTIS FPG COMPLEXED TO A 1,3 PROPANEDIOL CONTAINING DNA
1PJJA:132-223COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG AND AN ABASIC SITE CONTAINING DNA.
1PM5A:132-222CRYSTAL STRUCTURE OF WILD TYPE LACTOCOCCUS LACTIS FPG COMPLEXED TO A TETRAHYDROFURAN CONTAINING DNA
1TDZA:132-219CRYSTAL STRUCTURE COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG (MUTM) AND A FAPY-DG CONTAINING DNA
1XC8A:132-222CRYSTAL STRUCTURE COMPLEX BETWEEN THE WILD-TYPE LACTOCOCCUS LACTIS FPG (MUTM) AND A FAPY-DG CONTAINING DNA
(-)
Thermus thermophilus [TaxId: 274] (1)
1EE8A:122-210; B:122-210CRYSTAL STRUCTURE OF MUTM (FPG) PROTEIN FROM THERMUS THERMOPHILUS HB8
(-)
Protein domain: Endonuclease VIII (8)
(-)
Escherichia coli [TaxId: 562] (8)
1K3WA:125-214CRYSTAL STRUCTURE OF A TRAPPED REACTION INTERMEDIATE OF THE DNA REPAIR ENZYME ENDONUCLEASE VIII WITH DNA
1K3XA:125-213CRYSTAL STRUCTURE OF A TRAPPED REACTION INTERMEDIATE OF THE DNA REPAIR ENZYME ENDONUCLEASE VIII WITH BROMINATED-DNA
1Q39A:125-213CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI: THE WT ENZYME AT 2.8 RESOLUTION.
1Q3BA:125-213CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI: THE R252A MUTANT AT 2.05 RESOLUTION.
1Q3CA:125-213CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI: THE E2A MUTANT AT 2.3 RESOLUTION.
2EA0A:125-214CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE
2OPFA:125-213CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI (R252A) IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE
2OQ4A:125-213; B:125-212CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI (E2Q) IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE
(-)
Protein domain: Endonuclease VIII-like 1 (NEIL1) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1TDHA:132-246CRYSTAL STRUCTURE OF HUMAN ENDONUCLEASE VIII-LIKE 1 (NEIL1)
(-)
Family: Ribosomal protein S13 (70)
(-)
Protein domain: Ribosomal protein S13 (70)
(-)
Thermus thermophilus [TaxId: 274] (44)
1FJGM:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
1HNWM:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
1HNXM:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH PACTAMYCIN
1HNZM:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B
1HR0M:CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
1I94M:CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
1I95M:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE
1I96M:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
1I97M:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
1J5EM:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT
1N32M:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N33M:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N34M:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CODON AND CRYSTALLOGRAPHICALLY DISORDERED NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION
1N36M:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CRYSTALLOGRAPHICALLY DISORDERED CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION
1XMOM:CRYSTAL STRUCTURE OF MNM5U34T6A37-TRNALYSUUU COMPLEXED WITH AAG-MRNA IN THE DECODING CENTER
1XMQM:CRYSTAL STRUCTURE OF T6A37-ASLLYSUUU AAA-MRNA BOUND TO THE DECODING CENTER
1XNQM:STRUCTURE OF AN INOSINE-ADENINE WOBBLE BASE PAIR COMPLEX IN THE CONTEXT OF THE DECODING CENTER
1XNRM:CRYSTAL STRUCTURE OF AN INOSINE-CYTOSINE WOBBLE BASE PAIR IN THE CONTEXT OF THE DECODING CENTER
2E5LM:2-123A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE- DALGARNO INTERACTION
2F4VM:2-12630S RIBOSOME + DESIGNER ANTIBIOTIC
2HHHM:2-126CRYSTAL STRUCTURE OF KASUGAMYCIN BOUND TO THE 30S RIBOSOMAL SUBUNIT
2R1GI:2-126COORDINATES OF THE THERMUS THERMOPHILUS 30S COMPONENTS NEIGHBORING RBFA AS OBTAINED BY FITTING INTO THE CRYO-EM MAP OF A 30S-RBFA COMPLEX
2UU9M:2-126STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUG-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUAM:2-126STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUC-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUBM:2-126STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUU-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUCM:2-126STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUA-CODON IN THE A-SITE AND PAROMOMYCIN.
2UXBM:2-126CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA GGGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXCM:2-126CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA UCGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXDM:2-126CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA CGGG IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2VQEM:2-126MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
2VQFM:2-126MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
(-)
Family: Topoisomerase VI-B subunit middle domain (7)
(-)
Protein domain: Topoisomerase VI-B subunit middle domain (7)
(-)
Sulfolobus shibatae [TaxId: 2286] (7)
1MU5A:229-306STRUCTURE OF TOPOISOMERASE SUBUNIT
1MX0A:229-306; B:229-306; C:229-306; D:229-306; E:229-306; F:229-306STRUCTURE OF TOPOISOMERASE SUBUNIT
1Z59A:229-306TOPOISOMERASE VI-B, ADP-BOUND MONOMER FORM
1Z5AA:229-306; B:229-306TOPOISOMERASE VI-B, ADP-BOUND DIMER FORM
1Z5BA:229-306; B:229-306TOPOISOMERASE VI-B, ADP ALF4- BOUND DIMER FORM
1Z5CA:229-306; B:229-306TOPOISOMERASE VI-B, ADP PI BOUND DIMER FORM
2HKJA:229-306TOPOISOMERASE VI-B BOUND TO RADICICOL