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(-) Description

Title :  NMR STRUCTURE OF THE N-DOMAIN OF TROPONIN C BOUND TO SWITCH REGION OF TROPONIN I AND 3-METHYLDIPHENYLAMINE (PEPTIDE MODE)
 
Authors :  F. Cai, P. M. Hwang, B. D. Sykes
Date :  21 Jun 17  (Deposition) - 12 Jul 17  (Release) - 12 Jul 17  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (8x)
NMR Structure *:  A  (1x)
Keywords :  Cardiac Troponin, Calcium Binding Protein, Ef Hand, Metal Binding Protein, Calcium Sensitizer (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Cai, M. X. Li, S. E. Pineda-Sanabria, S. Gelozia, S. Lindert, F. West B. D. Sykes, P. M. Hwang
Structures Reveal Details Of Small Molecule Binding To Cardiac Troponin.
J. Mol. Cell. Cardiol. V. 101 134 2016
PubMed-ID: 27825981  |  Reference-DOI: 10.1016/J.YJMCC.2016.10.016

(-) Compounds

Molecule 1 - TROPONIN C, TROPONIN I
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 1-90;
138-163
    Gene: TNNC1, TNNC, TNNI3, TNNC1
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: TN-C,CARDIAC TROPONIN I

 Structural Features

(-) Chains, Units

  1
NMR Structure (8x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
19XG1Ligand/Ion3-METHYL-N-PHENYLANILINE
NMR Structure * (1, 1)
No.NameCountTypeFull Name
19XG1Ligand/Ion3-METHYL-N-PHENYLANILINE

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:27 , LEU A:41 , MET A:45 , MET A:60 , VAL A:72 , PHE A:77 , MET A:80 , ILE A:148 , MET A:153binding site for residue 9XG A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5W88)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5W88)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5W88)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5W88)

(-) Exons   (0, 0)

(no "Exon" information available for 5W88)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:120
                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh....hhhhhhhhhhh.........hhhhhhhhhhhhhhh................hhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                 5w88 A   1 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKFKRPTLRRVRISADAMMQALLGARAKGH 165
                                    10        20        30        40        50        60        70        80        90|      145       155       165
                                                                                                                    90|                             
                                                                                                                    136
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5W88)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5W88)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5W88)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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  5w88
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  TNNI3_HUMAN | P19429
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TNNC1_HUMAN | P63316: 1ap4 1ih0 1j1d 1j1e 1lj6 1lxf 1mxl 1ozs 1spy 1wrk 1wrl 2jt0 2jt3 2jt8 2jtz 2jxl 2kdh 2kfx 2kgb 2krd 2l1r 2l98 2mkp 2mle 2mlf 2mzp 2n79 2n7l 3rv5 3sd6 3swb 4gje 4gjf 4gjg 4y99 5vln
        TNNI3_HUMAN | P19429: 1j1d 1j1e 1lxf 1mxl 1ozs 2kgb 2krd 2l1r 2mzp 2n7l 4y99 5vln

(-) Related Entries Specified in the PDB File

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