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(-) Description

Title :  THE STRUCTURAL AND FUNCTIONAL EFFECTS OF THE FAMILIAL HYPERTROPHIC CARDIOMYOPATHY-LINKED CARDIAC TROPONIN C MUTATION, L29Q
 
Authors :  I. M. Robertson, I. Sevrieva, M. X. Li, M. Irving, Y. Sun, B. Sykes
Date :  06 Sep 15  (Deposition) - 28 Oct 15  (Release) - 28 Oct 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  C  (20x)
NMR Structure *:  C  (1x)
Keywords :  Cardiac, Contractile Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  I. M. Robertson, I. Sevrieva, M. X. Li, M. Irving, Y. B. Sun, B. D. Sykes
The Structural And Functional Effects Of The Familial Hypertrophic Cardiomyopathy-Linked Cardiac Troponin C Mutation, L29Q.
J. Mol. Cell. Cardiol. V. 87 257 2015
PubMed-ID: 26341255  |  Reference-DOI: 10.1016/J.YJMCC.2015.08.017

(-) Compounds

Molecule 1 - TROPONIN C, SLOW SKELETAL AND CARDIAC MUSCLES
    Chains: C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET-3A
    Gene: TNNC1, TNNC
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: TN-C

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): C
NMR Structure * (1x): C

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1CA1Ligand/IonCALCIUM ION
NMR Structure * (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP C:65 , ASP C:67 , SER C:69 , THR C:71 , ASP C:73 , GLU C:76BINDING SITE FOR RESIDUE CA C 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N79)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2N79)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N79)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2N79)

(-) Exons   (0, 0)

(no "Exon" information available for 2N79)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain C from PDB  Type:PROTEIN  Length:89
                                                                                                                        
               SCOP domains ----------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eehhhhhhhhhhhh...hhhhhhhhhhh.......eehhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                  2n79 C  1 MDDIYKAAVEQLTEEQKNEFKAAFDIFVQGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS 89
                                    10        20        30        40        50        60        70        80
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N79)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N79)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N79)

(-) Gene Ontology  (23, 23)

NMR Structure(hide GO term definitions)

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  2n79
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  TNNC1_HUMAN | P63316
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TNNC1_HUMAN | P63316: 1ap4 1ih0 1j1d 1j1e 1lj6 1lxf 1mxl 1ozs 1spy 1wrk 1wrl 2jt0 2jt3 2jt8 2jtz 2jxl 2kdh 2kfx 2kgb 2krd 2l1r 2l98 2mkp 2mle 2mlf 2mzp 2n7l 3rv5 3sd6 3swb 4gje 4gjf 4gjg 4y99 5vln 5w88

(-) Related Entries Specified in the PDB File

1ap4
1r2u RELATED ID: 25797 RELATED DB: BMRB
2ctn
2mlf