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(-) Description

Title :  HSP72-NBD BOUND TO COMPOUND TCI 8 - TYR15 IN UP-CONFORMATION
 
Authors :  J. Pettinger, I. M. Westwood, N. Cronin, Y. -V. Le Bihan, R. L. M. Van Mo
Date :  05 Dec 16  (Deposition) - 01 Mar 17  (Release) - 29 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.87
Chains :  Asym./Biol. Unit :  A
Keywords :  Irreversible Inhibitor, Chaperone, Lysine Modification (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Pettinger, Y. V. Le Bihan, M. Widya, R. L. Van Montfort, K. Jones, M. D. Cheeseman
An Irreversible Inhibitor Of Hsp72 That Unexpectedly Target Lysine-56.
Angew. Chem. Int. Ed. Engl. V. 56 3536 2017
PubMed-ID: 28225177  |  Reference-DOI: 10.1002/ANIE.201611907

(-) Compounds

Molecule 1 - HEAT SHOCK 70 KDA PROTEIN 1A
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Taxid: 511693
    Fragment: UNP RESIDUES 1-380
    Gene: HSPA1A, HSPA1, HSX70
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: HEAT SHOCK 70 KDA PROTEIN 1,HSP70.1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1FLC1Ligand/IonCITRATE ANION
2TI81Ligand/Ion3-[(2~{R},3~{S},4~{R},5~{R})-5-[6-AZANYL-8-[(4-CHLOROPHENYL)METHYLAMINO]PURIN-9-YL]-3,4-BIS(OXIDANYL)OXOLAN-2-YL]PROPYL PROP-2-ENOATE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:37 , ASP A:46 , GLY A:202 , GLY A:230 , GLU A:268 , LYS A:271 , ARG A:272 , SER A:275 , GLY A:339 , SER A:340 , ARG A:342 , ILE A:343 , ASP A:366 , HOH A:586 , HOH A:656 , HOH A:696 , HOH A:746binding site for residue TI8 A 401
2AC2SOFTWAREASP A:152 , HIS A:240 , GLU A:243 , GLU A:244 , ARG A:247 , ARG A:301 , HOH A:516 , HOH A:523 , HOH A:538 , HOH A:616 , HOH A:741 , HOH A:751 , HOH A:851binding site for residue FLC A 402

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5MKR)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5MKR)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5MKR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5MKR)

(-) Exons   (0, 0)

(no "Exon" information available for 5MKR)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:385
                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...eeeeeeee..eeee.........ee..eee....eeehhhhhhhhhhhhh.ee.hhhhhh.....hhhhhhhhh....eeeee..eeeeeeee..eeeeehhhhhhhhhhhhhhhhhhhhhh....eeeeee....hhhhhhhhhhhhhhh..eeeeeeehhhhhhhhh.......eeeeeeeee....eeeeeeeee..eeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh....eeeeeeeeee..eeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhh.eeeeehhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mkr A   1 MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILIKSTRA 386
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                                                                                                                                                                                                                      189|                                                                                                                                                                                                   
                                                                                                                                                                                                                       191
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5MKR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5MKR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5MKR)

(-) Gene Ontology  (52, 52)

Asymmetric/Biological Unit(hide GO term definitions)

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  5mkr
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  HS71A_HUMAN | P0DMV8
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HS71A_HUMAN | P0DMV8: 1hjo 1s3x 1xqs 2e88 2e8a 2lmg 3a8y 3atu 3atv 3ay9 3d2e 3d2f 3jxu 3lof 3q49 4io8 4j8f 4po2 4wv5 4wv7 5aqw 5aqx 5aqy 5aqz 5ar0 5bn8 5bn9 5bpl 5bpm 5bpn 5gjj 5mks

(-) Related Entries Specified in the PDB File

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