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(-) Description

Title :  CRYSTAL STRUCTURE OF A FUSION PROTEIN CONTAINING THE NBD OF HSP70 AND THE MIDDLE DOMAIN OF HIP
 
Authors :  Z. Li, A. Bracher
Date :  14 Feb 13  (Deposition) - 03 Jul 13  (Release) - 28 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  A  (1x)
Keywords :  Actin-Like Fold, Nucleotide Binding Domain, Tetratricopeptide Repeat, Solenoid, Molecular Chaperone Complex, Cytosol, Chaperone (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Z. Li, F. U. Hartl, A. Bracher
Structure And Function Of Hip, An Attenuator Of The Hsp70 Chaperone Cycle.
Nat. Struct. Mol. Biol. V. 20 929 2013
PubMed-ID: 23812373  |  Reference-DOI: 10.1038/NSMB.2608

(-) Compounds

Molecule 1 - HEAT SHOCK 70 KDA PROTEIN 1A/1B, HSC70-INTERACTING PROTEIN
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPPROEX-HTB
    Expression System StrainBL21(DE3) COD+ RIL
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentP08107 RESIDUES 1-382, P50503 RESIDUES 77-247
    GeneHSPA1, HSPA1A, HSPA1B, ST13, FAM10A1, HIP, HSPA1A, ST13
    Organism CommonHUMAN, BROWN RAT,RAT,RATS
    Organism ScientificHOMO SAPIENS, RATTUS NORVEGICUS
    Organism Taxid9606, 10116
    Other DetailsHSP70(1-382)-HIP(77-247) FUSION PROTEIN

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (2x)A
Biological Unit 2 (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 20)

Asymmetric Unit (4, 20)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2IOD17Ligand/IonIODIDE ION
3MG1Ligand/IonMAGNESIUM ION
4PO41Ligand/IonPHOSPHATE ION
Biological Unit 1 (3, 38)
No.NameCountTypeFull Name
1ADP2Ligand/IonADENOSINE-5'-DIPHOSPHATE
2IOD34Ligand/IonIODIDE ION
3MG-1Ligand/IonMAGNESIUM ION
4PO42Ligand/IonPHOSPHATE ION
Biological Unit 2 (3, 19)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2IOD17Ligand/IonIODIDE ION
3MG-1Ligand/IonMAGNESIUM ION
4PO41Ligand/IonPHOSPHATE ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:13 , THR A:14 , TYR A:15 , GLY A:201 , GLY A:202 , GLY A:230 , GLU A:268 , LYS A:271 , ARG A:272 , SER A:275 , GLY A:338 , GLY A:339 , SER A:340 , ARG A:342 , ASP A:366 , MG A:602 , PO4 A:603 , HOH A:722 , HOH A:725 , HOH A:732BINDING SITE FOR RESIDUE ADP A 601
02AC2SOFTWAREADP A:601 , PO4 A:603 , HOH A:722 , HOH A:723 , HOH A:724 , HOH A:725BINDING SITE FOR RESIDUE MG A 602
03AC3SOFTWAREGLY A:12 , THR A:13 , LYS A:71 , PRO A:147 , GLU A:175 , THR A:204 , ADP A:601 , MG A:602 , HOH A:723 , HOH A:724BINDING SITE FOR RESIDUE PO4 A 603
04AC4SOFTWAREARG A:272 , LYS A:516BINDING SITE FOR RESIDUE IOD A 604
05AC5SOFTWAREARG A:548BINDING SITE FOR RESIDUE IOD A 609
06AC6SOFTWAREILE A:172BINDING SITE FOR RESIDUE IOD A 610
07AC7SOFTWARELYS A:112 , PHE A:114 , IOD A:613BINDING SITE FOR RESIDUE IOD A 612
08AC8SOFTWAREARG A:49 , IOD A:612BINDING SITE FOR RESIDUE IOD A 613
09AC9SOFTWAREILE A:297 , THR A:298 , ARG A:301BINDING SITE FOR RESIDUE IOD A 615
10BC1SOFTWARELYS A:361BINDING SITE FOR RESIDUE IOD A 616
11BC2SOFTWARELYS A:56 , ARG A:261 , GLU A:268BINDING SITE FOR RESIDUE IOD A 617
12BC3SOFTWARELYS A:496BINDING SITE FOR RESIDUE IOD A 619

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4J8F)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4J8F)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4J8F)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4J8F)

(-) Exons   (0, 0)

(no "Exon" information available for 4J8F)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:551
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee...eeeeeeee..eeee.........ee..eee....eeehhhhhhhhhhhhh.ee.hhhhhh.....hhhhhhhhh....eeee....eeeeeee..eeeeehhhhhhhhhhhhhhhhhhhhhh....eeeeee....hhhhhhhhhhhhhhh..eeeeeeehhhhhhhhh.........eeeeeeee....eeeeeeeee..eeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeee..eeeeeeeehhhhhhhhhhhhhh.hhhhhhhhhhhh.hhhhh.eeeeehhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhhhh.........................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4j8f A   0 FMAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGLESDLEIDNEGVIEADTDAPQEMGDENAEITEAMMDEANEKKGAAIDALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAARDLALACKLDYDEDASAMLREVQPRAQKIAEHRRKYERKREE 550
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549 

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4J8F)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4J8F)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4J8F)

(-) Gene Ontology  (64, 110)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        F10A1_RAT | P505034j8c 4j8d 4j8e
        HS71A_HUMAN | P0DMV81hjo 1s3x 1xqs 2e88 2e8a 2lmg 3a8y 3atu 3atv 3ay9 3d2e 3d2f 3jxu 3lof 3q49 4io8 4po2 4wv5 4wv7 5aqw 5aqx 5aqy 5aqz 5ar0 5bn8 5bn9 5bpl 5bpm 5bpn 5gjj 5mkr 5mks
        HS71B_HUMAN | P0DMV91hjo 1s3x 1xqs 2e88 2e8a 2lmg 3a8y 3atu 3atv 3ay9 3d2e 3d2f 3jxu 3lof 4po2 4wv5 4wv7

(-) Related Entries Specified in the PDB File

4j8c 4j8d 4j8e