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(-) Description

Title :  TRYPTOPHAN 5-HYDROXYLASE IN COMPLEX WITH INHIBITOR (3~{S})-8-[2-AZANYL-6-[(1~{R})-1-(4-CHLORANYL-2-PHENYL-PHENYL)-2,2,2-TRIS(FLUORANYL)ETHOXY]PYRIMIDIN-4-YL]-2,8-DIAZASPIRO[4.5]DECANE-3-CARBOXYLIC ACID
 
Authors :  A. J. Stein, D. R. Goldberg, S. De Lombaert, M. C. Holt
Date :  26 Jul 16  (Deposition) - 25 Jan 17  (Release) - 25 Jan 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Tph1, Iron, Acyl, Quanidine, Oxidoreductase-Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. R. Goldberg, S. De Lombaert, R. Aiello, P. Bourassa, N. Barucci, Q. Zhang, V. Paralkar, A. J. Stein, M. Holt, J. Valentine, W. Zavadoski
Optimization Of Spirocyclic Proline Tryptophan Hydroxylase- Inhibitors.
Bioorg. Med. Chem. Lett. V. 27 413 2017
PubMed-ID: 28041831  |  Reference-DOI: 10.1016/J.BMCL.2016.12.053

(-) Compounds

Molecule 1 - TRYPTOPHAN 5-HYDROXYLASE 1
    Chains: A
    EC Number: 1.14.16.4
    Engineered: YES
    Expression System: ESCHERICHIA COLI K-12
    Expression System Strain: K-12
    Expression System Taxid: 83333
    Gene: TPH1, TPH, TPRH, TRPH
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: TRYPTOPHAN 5-MONOOXYGENASE 1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
16Z41Ligand/Ion(3~{S})-8-[2-AZANYL-6-[(1~{R})-1-(4-CHLORANYL-2-PHENYL-PHENYL)-2,2,2-TRIS(FLUORANYL)ETHOXY]PYRIMIDIN-4-YL]-2,8-DIAZASPIRO[4.5]DECANE-3-CARBOXYLIC ACID
2FE1Ligand/IonFE (III) ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:272 , HIS A:277 , GLU A:317 , HOH A:627 , HOH A:655binding site for residue FE A 501
2AC2SOFTWARELEU A:236 , ARG A:257 , TYR A:264 , THR A:265 , PRO A:266 , GLU A:267 , PRO A:268 , HIS A:272 , ALA A:309 , PHE A:313 , GLU A:317 , GLY A:333 , SER A:336 , SER A:337 , CYS A:364 , ILE A:366 , HOH A:629 , HOH A:655binding site for residue 6Z4 A 502

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5L01)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5L01)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 5L01)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:283
                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhh...........hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.eeee.....hhhhhhhhhh..eeee................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.....eeee..eeee.hhhhhhhhhhhhhhhh....eee.hhhhhh............eeee.hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5l01 A 104 TVPWFPKKISDLDHCANRVLMYGGFKDNVYRKRRKYFADLAMNYKHGDPIPKVEFTEEEIKTWGTVFQELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFGAGLLSSISELKHALSGHAKVKPFDPKITCKQECLITTFQDVYFVSESFEDAKEKMREFTKTIK 394
                                   113       123  ||   141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391   
                                                126|                                                                                                                                                                                                                                                                   
                                                 135
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5L01)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5L01)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5L01)

(-) Gene Ontology  (21, 21)

Asymmetric/Biological Unit(hide GO term definitions)

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  5l01
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TPH1_HUMAN | P17752: 1in9 1mlw 3hf6 3hf8 3hfb 5j6d 5tpg

(-) Related Entries Specified in the PDB File

5j6d