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(-) Description

Title :  CRYSTAL STRUCTURE OF C-MET-M1250T IN COMPLEX WITH SAR125844.
 
Authors :  F. Vallee, J. Houtmann, J. -P. Marquette
Date :  19 Jan 16  (Deposition) - 23 Nov 16  (Release) - 23 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A
Keywords :  Transferase, Inhibitor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Ugolini, M. Kenigsberg, A. Rak, F. Vallee, J. Houtmann, M. Lowinski C. Capdevila, J. Khider, E. Albert, N. Martinet, C. Nemecek, S. Grapinet, E. Bacque, M. Roesner, C. Delaisi, L. Calvet, F. Bonche, D. Semiond, C. Egile, H. Goulaouic, L. Schio
Discovery And Pharmacokinetic And Pharmacological Propertie Of The Potent And Selective Met Kinase Inhibitor 1-{6-[6-(4-Fluorophenyl)-[1, 2, 4]Triazolo[4, 3-B]Pyridazin-3-Ylsulfanyl]Benzothiazol-2-Yl}-3-(2-Morpholi -4-Ylethyl)Urea (Sar125844).
J. Med. Chem. V. 59 7066 2016
PubMed-ID: 27355974  |  Reference-DOI: 10.1021/ACS.JMEDCHEM.6B00280

(-) Compounds

Molecule 1 - HEPATOCYTE GROWTH FACTOR RECEPTOR
    Chains: A
    EC Number: 2.7.10.1
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: HGF RECEPTOR,HGF/SF RECEPTOR,PROTO-ONCOGENE C-MET,SCATTER FACTOR RECEPTOR,SF RECEPTOR,TYROSINE-PROTEIN KINASE MET

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
163K1Ligand/Ion1-(6-{[6-(4-FLUOROPHENYL)[1,2,4]TRIAZOLO[4,3-B]PYRIDAZIN-3-YL]SULFANYL}-1,3-BENZOTHIAZOL-2-YL)-3-[2-(MORPHOLIN-4-YL)ETHYL]UREA

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:1092 , ALA A:1108 , LEU A:1157 , PRO A:1158 , TYR A:1159 , MET A:1160 , LYS A:1161 , HIS A:1162 , GLY A:1163 , ASP A:1164 , ASN A:1167 , ARG A:1208 , MET A:1211 , ALA A:1221 , ASP A:1222 , ALA A:1226binding site for residue 63K A 1401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5HOR)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Arg A:1148 -Ser A:1149
2Ser A:1149 -Glu A:1150
3Ser A:1152 -Pro A:1153
4Leu A:1245 -Pro A:1246

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5HOR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5HOR)

(-) Exons   (0, 0)

(no "Exon" information available for 5HOR)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:247
                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............ee.......eeee..hhhhhhhhhhhhh.........eee.......eeeee....eehhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee..hhhhh...hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhh..........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5hor A 1064 QAVQHVVIGPGCVYHGTLKIHCAVKSVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLPVKWTALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATY 1356
                                  1073|     1105     |1124      1134      1144      1154      1164      1174      1184      1194      1204      1214      1224    ||1249      1259      1269      1279      1289      1299      1309      1319      1329      1339      1349       
                                  1073|   1097|   1111|                                                                                                        1229|                                                                                                               
                                   1090    1104    1121                                                                                                         1245
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5HOR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5HOR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5HOR)

(-) Gene Ontology  (33, 33)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MET_HUMAN | P08581: 1fyr 1r0p 1r1w 1shy 1ssl 1ux3 2cew 2g15 2rfn 2rfs 2uzx 2uzy 2wd1 2wgj 2wkm 3a4p 3bux 3c1x 3ccn 3cd8 3ce3 3cth 3ctj 3dkc 3dkf 3dkg 3efj 3efk 3f66 3f82 3i5n 3l8v 3lq8 3q6u 3q6w 3qti 3r7o 3rhk 3u6h 3u6i 3vw8 3zbx 3zc5 3zcl 3zxz 3zze 4aoi 4ap7 4deg 4deh 4dei 4eev 4gg5 4gg7 4iwd 4k3j 4knb 4mxc 4o3t 4o3u 4r1v 4r1y 4xmo 4xyf 5dg5 5eob 5eyc 5eyd 5hlw 5hni 5ho6 5hoa 5hti 5t3q 5uab 5uad 5uaf

(-) Related Entries Specified in the PDB File

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