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(-) Description

Title :  CRYSTAL STRUCTURE OF C-TERMINAL MODIFIED TAU PEPTIDE-HYBRID 201D WITH 14-3-3SIGMA
 
Authors :  M. Bartel, L. G. Milroy, L. Brunsveld, C. Ottmann
Date :  06 Jan 16  (Deposition) - 27 Jan 16  (Release) - 27 Jan 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. G. Milroy, M. Bartel, M. A. Henen, S. Leysen, J. M. Adriaans, L. Brunsveld, I. Landrieu, C. Ottmann
Stabilizer-Guided Inhibition Of Protein-Protein Interactions.
Angew. Chem. Int. Ed. Engl. V. 54 15720 2015
PubMed-ID: 26537010  |  Reference-DOI: 10.1002/ANIE.201507976

(-) Compounds

Molecule 1 - 14-3-3 PROTEIN SIGMA
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: SFN, HME1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: EPITHELIAL CELL MARKER PROTEIN 1,STRATIFIN
 
Molecule 2 - MODIFIED TAU PEPTIDE
    Chains: B
    Engineered: YES
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 4)

Asymmetric Unit (4, 4)
No.NameCountTypeFull Name
160H1Mod. Amino Acid(2~{S})-2-(DIPHENYLMETHYL)PYRROLIDINE
2ACE1Mod. Amino AcidACETYL GROUP
3CSO1Mod. Amino AcidS-HYDROXYCYSTEINE
4SEP1Mod. Amino AcidPHOSPHOSERINE
Biological Unit 1 (4, 8)
No.NameCountTypeFull Name
160H2Mod. Amino Acid(2~{S})-2-(DIPHENYLMETHYL)PYRROLIDINE
2ACE2Mod. Amino AcidACETYL GROUP
3CSO2Mod. Amino AcidS-HYDROXYCYSTEINE
4SEP2Mod. Amino AcidPHOSPHOSERINE

(-) Sites  (0, 0)

(no "Site" information available for 5HF3)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5HF3)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Gly A:-4 -Ala A:-3
2Ser A:105 -His A:106

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5HF3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5HF3)

(-) Exons   (0, 0)

(no "Exon" information available for 5HF3)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:231
                                                                                                                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hf3 A  -4 GAMGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELScEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEGKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 231
                                     5        15        25        35  |     45        55        65     |||79        89        99       109       119       129      |140       150       160       170       180       190       200       210       220       230 
                                                                     38-CSO                           71||                                                        136|                                                                                             
                                                                                                       73|                                                         138                                                                                             
                                                                                                        77                                                                                                                                                         


Chain B from PDB  Type:PROTEIN  Length:9
                                         
               SCOP domains --------- SCOP domains
               CATH domains --------- CATH domains
               Pfam domains --------- Pfam domains
         Sec.struct. author ......... Sec.struct. author
                 SAPs(SNPs) --------- SAPs(SNPs)
                    PROSITE --------- PROSITE
                 Transcript --------- Transcript
                 5hf3 B   1 xRTPsLPTx   9
                            |   |   |
                            1-ACE   |
                                5-SEP
                                    9-60H
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5HF3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5HF3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5HF3)

(-) Gene Ontology  (81, 87)

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  Cis Peptide Bonds
    Gly A:-4 - Ala A:-3   [ RasMol ]  
    Ser A:105 - His A:106   [ RasMol ]  
 
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  1433S_HUMAN | P31947
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  TAU_HUMAN | P10636
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        1433S_HUMAN | P31947: 1ywt 1yz5 3iqj 3iqu 3iqv 3lw1 3mhr 3o8i 3p1n 3p1o 3p1p 3p1q 3p1r 3p1s 3smk 3sml 3smm 3smn 3smo 3sp5 3spr 3t0l 3t0m 3u9x 3ux0 4dat 4dau 4dhm 4dhn 4dho 4dhp 4dhq 4dhr 4dhs 4dht 4dhu 4fl5 4fr3 4hqw 4hru 4iea 4jc3 4jdd 4qli 4y32 4y3b 4y5i 5btv 5ltw 5lu1 5lu2 5my9 5myc
        TAU_HUMAN | P10636: 1i8h 2mz7 2on9 3ovl 4e0m 4e0n 4e0o 4fl5 4glr 4np8 4tqe 4y32 4y3b 4y5i 5dmg 5e2v 5e2w 5k7n

(-) Related Entries Specified in the PDB File

4y3b -REPLACEMENT COORDINATES FOR OBSOLETE 4Y3B. -NEW DEPOSITION WITH CORRECTED COORDINATES. -THIS NEW DEPOSITION REPLACES 4Y3B