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(-) Description

Title :  STRUCTURE OF THE MAMMALIAN VOLTAGE-GATED CALCIUM CHANNEL CAV1.1 COMPLEX FOR CLASSII MAP
 
Authors :  J. P. Wu, Z. Yan, Z. Q. Li, Q. Zhou, N. Yan
Date :  02 Jul 16  (Deposition) - 14 Sep 16  (Release) - 21 Sep 16  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  3.90
Chains :  Asym./Biol. Unit :  A,B,C,E,F
Keywords :  Complex, Channel, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. P. Wu, Z. Yan, Z. Q. Li, X. Y. Qian, S. Lu, M. Q. Dong, Q. Zhou, N. Yan
Structure Of The Voltage-Gated Calcium Channel Cav1. 1 At 3. Angstrom Resolution
Nature V. 537 191 2016
PubMed-ID: 27580036  |  Reference-DOI: 10.1038/NATURE19321

(-) Compounds

Molecule 1 - VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT ALPHA-1S
    Chains: A
    Organism Common: RABBIT
    Organism Scientific: ORYCTOLAGUS CUNICULUS
    Organism Taxid: 9986
    Synonym: CALCIUM CHANNEL,L TYPE,ALPHA-1 POLYPEPTIDE,ISOFORM 3, SKELETAL MUSCLE,VOLTAGE-GATED CALCIUM CHANNEL SUBUNIT ALPHA CAV1.1
 
Molecule 2 - VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT BETA-1
    Chains: B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX-4T-2
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 80-174
    Gene: CACNB1, CACNLB1
    Organism Common: RABBIT
    Organism Scientific: ORYCTOLAGUS CUNICULUS
    Organism Taxid: 9986
    Synonym: CAB1,CALCIUM CHANNEL VOLTAGE-DEPENDENT SUBUNIT BETA 1
 
Molecule 3 - VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT BETA-1
    Chains: C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX-4T-2
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 265-463
    Gene: CACNB1, CACNLB1
    Organism Common: RABBIT
    Organism Scientific: ORYCTOLAGUS CUNICULUS
    Organism Taxid: 9986
    Synonym: CAB1,CALCIUM CHANNEL VOLTAGE-DEPENDENT SUBUNIT BETA 1
 
Molecule 4 - VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA-1 SUBUNIT
    Chains: E
    Organism Common: RABBIT
    Organism Scientific: ORYCTOLAGUS CUNICULUS
    Organism Taxid: 9986
    Synonym: DIHYDROPYRIDINE-SENSITIVE L-TYPE,SKELETAL MUSCLE CALCIUM CHANNEL SUBUNIT GAMMA
 
Molecule 5 - VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-1
    Chains: F
    Organism Common: RABBIT
    Organism Scientific: ORYCTOLAGUS CUNICULUS
    Organism Taxid: 9986
    Synonym: VOLTAGE-GATED CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-1

 Structural Features

(-) Chains, Units

  12345
Asymmetric/Biological Unit : ABCEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 29)

Asymmetric/Biological Unit (4, 29)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2CA3Ligand/IonCALCIUM ION
3ETA1Mod. Amino AcidETHANOLAMINE
4NAG23Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (18, 18)

Asymmetric Unit (18, 18)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:292 , GLU A:614 , GLU A:1014 , GLY A:1322 , CA A:1903binding site for residue CA A 1902
02AC2SOFTWARECA A:1902binding site for residue CA A 1903
03AC3SOFTWAREASP A:78 , SER F:263 , SER F:265 , THR F:333binding site for residue CA F 1201
04AC4SOFTWAREASN A:257binding site for Mono-Saccharide NAG A 1901 bound to ASN A 257
05AC5SOFTWAREASN F:94binding site for Mono-Saccharide NAG F 1214 bound to ASN F 94
06AC6SOFTWAREARG F:116 , SER F:121 , ASN F:186 , SER F:189binding site for Poly-Saccharide residues BMA F 1208 through NAG F 1210 bound to ASN F 186
07AC7SOFTWAREASN F:326binding site for Mono-Saccharide NAG F 1204 bound to ASN F 326
08AC8SOFTWAREASN F:350binding site for Poly-Saccharide residues NAG F 1202 through NAG F 1203 bound to ASN F 350
09AC9SOFTWAREGLN F:110 , TRP F:115 , ASN F:470binding site for Poly-Saccharide residues NAG F 1211 through BMA F 1213 bound to ASN F 470
10AD1SOFTWAREARG F:591 , ASN F:606binding site for Mono-Saccharide NAG F 1215 bound to ASN F 606
11AD2SOFTWAREGLU F:82 , ASN F:615binding site for Poly-Saccharide residues NAG F 1205 through NAG F 1206 bound to ASN F 615
12AD3SOFTWAREASN F:678 , GLU F:681binding site for Poly-Saccharide residues NAG F 1218 through NAG F 1219 bound to ASN F 678
13AD4SOFTWAREPHE F:783 , ASN F:784 , ARG F:876binding site for Mono-Saccharide NAG F 1220 bound to ASN F 784
14AD5SOFTWAREASP F:45 , LEU F:49 , THR F:52 , ILE F:729 , ASN F:827binding site for Poly-Saccharide residues NAG F 1223 through NAG F 1225 bound to ASN F 827
15AD6SOFTWAREASN F:891binding site for Mono-Saccharide NAG F 1207 bound to ASN F 891
16AD7SOFTWARELEU F:593 , ASN F:898 , PHE F:985binding site for Poly-Saccharide residues NAG F 1216 through NAG F 1217 bound to ASN F 898
17AD8SOFTWAREILE F:892 , ASN F:988binding site for Mono-Saccharide NAG F 1222 bound to ASN F 988
18AD9SOFTWAREASN F:1001 , CYS F:1027binding site for Mono-Saccharide NAG F 1221 bound to ASN F 1001

(-) SS Bonds  (11, 11)

Asymmetric/Biological Unit
No.Residues
1A:226 -A:254
2A:245 -A:261
3A:957 -A:968
4A:1338 -A:1352
5E:57 -E:80
6F:305 -F:1047
7F:356 -F:1062
8F:406 -F:1074
9F:907 -F:977
10F:999 -F:1029
11F:1002 -F:1027

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Cys A:1439 -Pro A:1440

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5GJW)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5GJW)

(-) Exons   (0, 0)

(no "Exon" information available for 5GJW)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:1291
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhh..hhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh..........................................................hhhhhhhhhhhhhh...hhhhhhhhhhhh....hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh.hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhh..hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eee..............eeee.......eeee...eee......hhhhhhhhhhhhhh..hhhhhhhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh.........hhhhhhhhhhhh...hhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....................hhhhhhhhhhhhhh..hhhhhhh.........................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh.....eeehhhhhhhhhh.............hhhhhhhhh.........eeehhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5gjw A   32 FCLTLQNPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPEDDNNSLNLGLEKLEYFFLTVFSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFIIVFLGVFTAILVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPLFHIALLVLFMVIIYAIIGLELFKGKMHKTCYYIGTDIVATVENEKPSPCARTGSGRPCTINGSECRGGWPGPNHGITHFDNFGFSMLTVYQCITMEGWTDVLYWVNDAIGNEWPWIYFVTLILLGSFFILNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLEEDLRGYMSWITQGEVMNRVFRWKCHDLVKSRVFYWLVILIVALNTLSIASEHHNQPLWLTHLQDIANRVLLSLFTIEMLLKMYGLGLRQYFMSIFNRFDCFVVCSGILELLLVESGAMTPLGISVLRCIRLLRLFKITKYWTSLSNLVASLLNSIRSIASLLLLLFLFIIIFALLGMQLFGGRYDFEDTEVRRSNFDNFPQALISVFQVLTGEDWNSVMYNGIMAYGGPSYPGVLVCIYFIILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEERKRRKMVRVLCHRIVNATWFTNFILLFILLSSAALAAEDPIRAESVRNQILGYFDIAFTSVFTVEIVLKMTTYGAFLHKGSFCRNYFNILDLLVVAVSLISMGVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVLVTTLLQFMFACIGVQLFKGKFFSCNDLSKMTEEECRGYYYVYKDGDPTQMELRPRQWIHNDFHFDNVLSAMMSLFTVSTFEGWPQLLYRAIDSNEEDMGPVYNNRVEMAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGETEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYVVTSSYFEYLMFALIMLNTICLGMQHYHQSEEMNHISDILNVAFTIIFTLEMILKLLAFKARGYFGDPWNVFDFLIVIGSIIDVILSEIDTFRISSAFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALVDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEILLACSYGKLCDPESDYAPGEEYTCGTNFAYYYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKAIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWKRTSMKLLDQVIPPIGD 1515
                                    41        51        61        71        81        91       101       111       121       131       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372   ||  423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683  ||   794       804       814       824       834       844       854       864       874       884|      901       911       921       931       941       951       961       971       981       991      1001      1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131      1141      1151      1161      1171      1181      1191      1201   || 1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374      1384      1394      1404      1414      1424      1434      1444      1454      1464      1474      1484      1494      1504      1514 
                                                                                                                                     139|                                                                                                                                                                                                                    376|                                                                                                                                                                                                                                                                         686|                                                                                             884|                                                                                                                                                                                                                                                                                                                     1205|                                                                                                                                                                                                                                                                                              
                                                                                                                                      161                                                                                                                                                                                                                     418                                                                                                                                                                                                                                                                          788                                                                                              892                                                                                                                                                                                                                                                                                                                      1229                                                                                                                                                                                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:100
                                                                                                                                     
               SCOP domains ---------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhh.......eeeee.........................eeeeee.....eeeeee......eeeeehhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                5gjw B   75 QGPHMALRKEAERQALAQLEKAKTKPVAFAVRTNVGYNPSPGDEVPVEGVAITFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLDSLRLLQEQ  174
                                    84        94       104       114       124       134       144       154       164       174


Chain C from PDB  Type:PROTEIN  Length:178
                                                                                                                                                                                                                   
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.....eeee........hhhhhhhhhhhhhhhhh...eeeeee..hhhhh..hhhhhhhhhhhhhhhhhhh.eeeeee.....hhhhh......eeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eee...hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5gjw C  265 VPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLKHLFDGRISITRVTADISLARSSLAEVQSEIERIFELARTLQLVALDADTINHPAQLSKTSLAPIIVYIKITSPKVLQRLIKSRGKSQSKHLNVQIAASEKLAQCPPEMFDIILDENQLEDACEHLAEYLEAYWKATHPPS  461
                                   274       284       294       304       314      |343       353       363       373       383       393       403       413       423       433       443       453        
                                                                                  321|                                                                                                                        
                                                                                   341                                                                                                                        


Chain E from PDB  Type:PROTEIN  Length:166
                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee....eee.....eeee...eeee...hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5gjw E    1 MSPTEAPKVRVTLFCILVGIVLAMTAVVSDHWAVLSPHCEAAHFGLWRICTKRGEKNCSYFSISAAAISVFSLGFLIMGTICALMAFRKKRDYLLRPASMFYVFAGLCLFVSLEVMRQSVKRMIEYYYSWSFACACAAFVLLFLGGISLLLFSLPRMPQNPWESCM  216
                                    10        20        30       |47        57  ||    82||     112       122       132       142       152       162  ||   180       190       200       210      
                                                                38|            60|     83|                                                          165|                                          
                                                                 46             76     104                                                           174                                          


Chain F from PDB  Type:PROTEIN  Length:942
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........................ee......ee..................hhhhhhhhh..hhhhhhhhhhhh.....eeee.....eee............hhhhhhhhhhh....ee..ee...hhhhhhhhhhhhhhhhhhhhhhh...........................hhhhhhhhhhhhh.........hhhhhhhhhhhh..........eeeeee........hhhhhhhhh.....eeeeeee......hhhhhhhhhhh....eee....hhhhhh.hhhhhhhhhhhh........ee...ee......eeeeeeeee...................eeeeeeeehhhhhh............................................................hhhhhh..hhhhhhhhhhhh.....eeeeeeeee......eeeeeeeee.ee.......ee.........ee........hhhhhhhhhhhhhhh....eeee.............hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...........eeeeee...eeee.................hhhhhhhhhh.....................ee..ee............eeeeeeehhhhhhhhhhhhhh..eeeee.....eeee...........hhhhhhhhhhhhhhhh...eeeeeee...ee.......ee..eeeeeee.......eeeeee....eeeeeeee......eeeeee......................hhhhhh......................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5gjw F   29 FPSAVTIKSWVDKMQEDLVTLAKTASGVHQLVDIYEKYQDLYTVEPNNARQLVEIAARDIEKLLSNRSKALVRLALEAEKVQAAHQWREDFASVVYYNAKDQRIKPVFIDDANFRRQVSYQHAAVHIPTDIYEGSTIVLNELNWTSALDDVFKKNREEDPSLLWQVFGSATGLARYYPASPWVKIDLYDVRRRPWYIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDFVNVASFNSNAQDVSCFQHLVQANVRNKKVLKDAVNNITAKGITDYKKGFSFAFEQLLNYNVSRANCNKIIMLFTDGGEERAQEIFAKYNKDKKVRVFTFSVGQHNYDRGPIQWMACENKGYYYEIPSIGAIRINTQEYLDVLGRPMVLAGDKAKQVQWTNVYLDALELGLVITGTLPVFNITGQFENKTNLKNQLILGVMGVDVSLEDIKRLTPRFTLCPNGYYFAIDPNGYVLLHPNLQPKPIGVGIPTINLRKRRPNVQNPKSQEPVTLDFLDAELENDIKVEIRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSSLALVLPTYSFYYIKAKIEETITQARYSETLKPDNFEESGYTFLAPRDYCSDLKPSDNNTEFLLNFNEFIDRKTTDLINRVLLDAGFTNELVQNYWSKQKNIKGVKARFVVTDGGITRVYPKEAGENWQENPETYEDSFYKRSLDNDNYVFTAPYFNKSGPGAYESGIMVSKAVEIYIQGKLLKPAVVGIKIDVNSWIENFTKTSIRMDCVILDDGGFLLMANHDDYTNQIGRFFGEIDPSLMRHLVNISVYAFNKSYDYQSVCEPGAASKQSCITEQTQYFFDNDSKSFSGVLDCGNCSRIFHVEKLMNTNLIFIMVESKGTCPCDTRLLIQAEQTSDGPDPCDMVKQPRYRKGPDVCFDNNVLEDYTDCx 1075
                                    38        48        58        68        78        88        98       108       118  ||   132||     153       163       173       183       193       203       213       223  ||   240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690   ||  707       717       727       737       747       757       767       777       787       797       807       817       827      |853       863       873       883       893       903       973       983       993      1003      1013      1023      1033      1043      1053      1063      1073 |
                                                                                                                      121|    133|                                                                              226|                                                                                                                                                                                                                                                                                                                                                                                                                                                                         694|                                                                                                                                 834|                                                          912|                                                                                                  1075-ETA
                                                                                                                       126     145                                                                               234                                                                                                                                                                                                                                                                                                                                                                                                                                                                          702                                                                                                                                  851                                                           973
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5GJW)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5GJW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5GJW)

(-) Gene Ontology  (19, 50)

Asymmetric/Biological Unit(hide GO term definitions)

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  5gjw
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  CA2D1_RABIT | P13806
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  CAC1S_RABIT | P07293
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  CACB1_RABIT | P19517
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  CA2D1_RABIT | P13806
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  CAC1S_RABIT | P07293
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  CACB1_RABIT | P19517
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CA2D1_RABIT | P13806: 3jbr 5gjv
        CAC1S_RABIT | P07293: 1du1 1jzp 1t3l 3jbr 5gjv
        CACB1_RABIT | P19517: 5gjv
        CCG1_RABIT | P19518: 3jbr 5gjv

(-) Related Entries Specified in the PDB File

5gjv