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(-) Description

Title :  THE STRUCTURE OF THE PENTAMERIC SHELL PROTEIN MSM0273 FROM THE RMM MICROCOMPARTMENT
 
Authors :  E. Mallette, M. S. Kimber
Date :  03 Aug 16  (Deposition) - 14 Dec 16  (Release) - 08 Feb 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A,B,C,D,E
Keywords :  Bacterial Microcompartment, Pentameric Shell Protein, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. Mallette, M. S. Kimber
A Complete Structural Inventory Of The Mycobacterial Microcompartment Shell Proteins Constrains Models Of Global Architecture And Transport.
J. Biol. Chem. V. 292 1197 2017
PubMed-ID: 27927988  |  Reference-DOI: 10.1074/JBC.M116.754093

(-) Compounds

Molecule 1 - MSM0273
    Chains: A, B, C, D, E
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PET22B
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Gene: MSMEG_0273, MSMEI_0266
    Organism Scientific: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / MC(2)155)
    Organism Taxid: 246196
    Strain: ATCC 700084 / MC(2)155

 Structural Features

(-) Chains, Units

  12345
Asymmetric/Biological Unit : ABCDE

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5L37)

(-) Sites  (0, 0)

(no "Site" information available for 5L37)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5L37)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5L37)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5L37)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5L37)

(-) Exons   (0, 0)

(no "Exon" information available for 5L37)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:78
                                                                                                             
               SCOP domains ------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee...ee.......eeeeeee.....eeeeee........eeeeeehhhhhhh.........eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  5l37 A  1 MLRATVTGNVWSTRRIEGIPAGAFLEVEVEGTGSRMIAFDVLGSGVGEHVLIAQGSVASSWFTGTPPPIDALIIGSID 78
                                    10        20        30        40        50        60        70        


Chain B from PDB  Type:PROTEIN  Length:78
                                                                                                             
               SCOP domains ------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee............eeeeeee.....eeeeee........eeeeeehhhhhhh.........eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  5l37 B  1 MLRATVTGNVWSTRRIEGIPAGAFLEVEVEGTGSRMIAFDVLGSGVGEHVLIAQGSVASSWFTGTPPPIDALIIGSID 78
                                    10        20        30        40        50        60        70        


Chain C from PDB  Type:PROTEIN  Length:86
                                                                                                                     
               SCOP domains -------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee....ee.......eeeeeee.....eeeeee........eeeeeehhhhhhh.........eeeeee.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                  5l37 C  1 MLRATVTGNVWSTRRIEGIPAGAFLEVEVEGTGSRMIAFDVLGSGVGEHVLIAQGSVASSWFTGTPPPIDALIIGSIDTRSDSNPA 86
                                    10        20        30        40        50        60        70        80      


Chain D from PDB  Type:PROTEIN  Length:77
                                                                                                            
               SCOP domains ----------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee...ee.......eeeeeee.....eeeeee........eeeeeehhhhhhh.........eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------- Transcript
                  5l37 D  1 MLRATVTGNVWSTRRIEGIPAGAFLEVEVEGTGSRMIAFDVLGSGVGEHVLIAQGSVASSWFTGTPPPIDALIIGSI 77
                                    10        20        30        40        50        60        70       


Chain E from PDB  Type:PROTEIN  Length:78
                                                                                                             
               SCOP domains ------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee.eeee.......eeeeeee.....eeeeee........eeeeeehhhhhhh.........eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  5l37 E  1 MLRATVTGNVWSTRRIEGIPAGAFLEVEVEGTGSRMIAFDVLGSGVGEHVLIAQGSVASSWFTGTPPPIDALIIGSID 78
                                    10        20        30        40        50        60        70
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5L37)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5L37)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5L37)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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(no "Cis Peptide Bonds" information available for 5l37)
 

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 Related Entries

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(-) Related Entries Specified in the PDB File

5l38 5l39 5suh