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(-) Description

Title :  CRYSTAL STRUCTURE OF CREN7-DSDNA (GTGATCGC) COMPLEX
 
Authors :  Z. F. Zhang, Y. Gong
Date :  17 May 16  (Deposition) - 24 May 17  (Release) - 24 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,C,D  (1x)
Biol. Unit 2:  B,E,F  (1x)
Keywords :  Protein-Dna Complex, Beta-Sheet, Dna-Binding, Methylation, Dna Binding Protein-Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  L. Tian, Z. F. Zhang, H. Wang, M. Zhao, Y. Dong, Y. Gong
Sequence-Dependent T:G Base Pair Opening In Dna Double Heli Bound By Cren7, A Chromatin Protein Conserved Among Crenarchaea
Plos One V. 11 63361 2016
PubMed-ID: 27685992  |  Reference-DOI: 10.1371/JOURNAL.PONE.0163361

(-) Compounds

Molecule 1 - CHROMATIN PROTEIN CREN7
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneCREN7
    Organism ScientificSULFOLOBUS SOLFATARICUS P2
    Organism Taxid273057
    StrainP2
 
Molecule 2 - DNA (5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3')
    ChainsC, D, E, F
    EngineeredYES
    Organism ScientificSYNTHETIC CONSTRUCT
    Organism Taxid32630
    SyntheticYES

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit ABCDEF
Biological Unit 1 (1x)A CD  
Biological Unit 2 (1x) B  EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5K17)

(-) Sites  (0, 0)

(no "Site" information available for 5K17)

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:59
                                                                                           
               SCOP domains ----------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.....eeee...eeeee.......eeeeeee......eeeeee...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------- Transcript
                 5k17 A   2 SSGKKPVKVKTPAGKEAELVPEKVWALAPKGRKGVKIGLFKDPETGKYFRHKLPDDYPI  60
                                    11        21        31        41        51         

Chain B from PDB  Type:PROTEIN  Length:59
                                                                                           
               SCOP domains ----------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.....eeee...eeeee.......eeeeeee......eeeeee...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------- Transcript
                 5k17 B   2 SSGKKPVKVKTPAGKEAELVPEKVWALAPKGRKGVKIGLFKDPETGKYFRHKLPDDYPI  60
                                    11        21        31        41        51         

Chain C from PDB  Type:DNA  Length:8
                                        
                 5k17 C 101 GTGATCGC 108

Chain D from PDB  Type:DNA  Length:8
                                        
                 5k17 D 109 GTGATCGC 116

Chain E from PDB  Type:DNA  Length:8
                                        
                 5k17 E 101 GTGATCGC 108

Chain F from PDB  Type:DNA  Length:8
                                        
                 5k17 F 109 GTGATCGC 116

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5K17)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5K17)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5K17)

(-) Gene Ontology  (3, 3)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CREN7_SULSO | Q97ZE32jtm 3kxt 3lwh 3lwi 4r55 4r56 5k07 5wvw 5wvy 5wvz 5wwc

(-) Related Entries Specified in the PDB File

5k07