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(-) Description

Title :  CRYSTAL STRUCTURE OF SULFOLOBUS CREN7-DSDNA(GTGATCAC) COMPLEX
 
Authors :  Z. F. Zhang, Y. Gong, Y. Y. Chen, H. B. Li, L. Huang
Date :  20 Aug 14  (Deposition) - 05 Aug 15  (Release) - 05 Aug 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,C,D  (1x)
Biol. Unit 2:  B,E,F  (1x)
Keywords :  Beta-Sheet, Dna Binding, Dna Binding Protein-Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Z. F. Zhang, Y. Gong, Y. Y. Chen, H. B. Li, L. Huang
Insights Into The Interaction Between Cren7 And Dna: The Role Of Loop Beta 3-Beta 4
Extremophiles V. 19 395 2015
PubMed-ID: 25555709  |  Reference-DOI: 10.1007/S00792-014-0725-Y

(-) Compounds

Molecule 1 - CHROMATIN PROTEIN CREN7
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET30A
    Expression System StrainROSETTA 2 (DE3) PLYSS
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneCREN7, SSO6901
    Organism ScientificSULFOLOBUS SOLFATARICUS P2
    Organism Taxid273057
 
Molecule 2 - DNA (5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3')
    ChainsC, D, E, F
    EngineeredYES
    Organism ScientificSYNTHETIC
    Organism Taxid32630
    SyntheticYES

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit ABCDEF
Biological Unit 1 (1x)A CD  
Biological Unit 2 (1x) B  EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4R56)

(-) Sites  (0, 0)

(no "Site" information available for 4R56)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4R56)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4R56)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4R56)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4R56)

(-) Exons   (0, 0)

(no "Exon" information available for 4R56)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:59
                                                                                           
               SCOP domains ----------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.....eeee...eeeee.......eeeeeee......eeeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------- Transcript
                 4r56 A   2 SSGKKPVKVKTPAGKEAELVPEKVWALAPKGRKGVKIGLFKDPETGKYFRHKLPDDYPI  60
                                    11        21        31        41        51         

Chain B from PDB  Type:PROTEIN  Length:59
                                                                                           
               SCOP domains ----------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.....eeee...eeeee.......eeeeeee......eeeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------- Transcript
                 4r56 B   2 SSGKKPVKVKTPAGKEAELVPEKVWALAPKGRKGVKIGLFKDPETGKYFRHKLPDDYPI  60
                                    11        21        31        41        51         

Chain C from PDB  Type:DNA  Length:8
                                        
                 4r56 C 101 GTGATCAC 108

Chain D from PDB  Type:DNA  Length:8
                                        
                 4r56 D 109 GTGATCAC 116

Chain E from PDB  Type:DNA  Length:8
                                        
                 4r56 E 101 GTGATCAC 108

Chain F from PDB  Type:DNA  Length:8
                                        
                 4r56 F 109 GTGATCAC 116

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4R56)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4R56)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4R56)

(-) Gene Ontology  (3, 3)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CREN7_SULSO | Q97ZE32jtm 3kxt 3lwh 3lwi 4r55 5k07 5k17 5wvw 5wvy 5wvz 5wwc

(-) Related Entries Specified in the PDB File

3lwh 3lwi 4r55