5K0J - JenaLib

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Title :   CRYSTAL STRUCTURE OF COMT IN COMPLEX WITH 5-[5-[1-(4-METHOXYPHENYL) CYCLOPROPYL]-1H-PYRAZOL-3-YL]-2,4-DIMETHYL-1,3-THIAZOLE

Authors :   A. Ehler, R. M. Rodriguez-Sarmiento, M. G. Rudolph

Date :   17 May 16 (Deposition) - 07 Sep 16 (Release) - 21 Dec 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.94

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Methyltransferase, Neurotransmitter Degradation, Catechol, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. Lerner, R. Jakob-Roetne, B. Buettelmann, A. Ehler, M. Rudolph, R. M. Rodriguez Sarmiento
Design Of Potent And Druglike Nonphenolic Inhibitors For Catechol O-Methyltransferase Derived From A Fragment Screening Approach Targeting The S-Adenosyl-L-Methionine Pocket.
J. Med. Chem. V. 59 10163 2016
PubMed-ID: 27685665 | Reference-DOI: 10.1021/ACS.JMEDCHEM.6B00927

Molecule 1 - CATECHOL O-METHYLTRANSFERASE
	Chains	:	A, B
	EC Number	:	2.1.1.6
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	COMT
	Organism Common	:	NORWAY RAT
	Organism Scientific	:	RATTUS NORVEGICUS
	Organism Taxid	:	10116

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 8)

No.	Name	Count	Type	Full Name
1	6P2	2	Ligand/Ion	5-{3-[1-(4-METHOXYPHENYL)CYCLOPROPYL]-1H-PYRAZOL-5-YL}-2,4-DIMETHYL-1,3-THIAZOLE
2	NA	4	Ligand/Ion	SODIUM ION
3	NHE	2	Ligand/Ion	2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID

Biological Unit 1 (2, 2)

No.	Name	Count	Type	Full Name
1	6P2	1	Ligand/Ion	5-{3-[1-(4-METHOXYPHENYL)CYCLOPROPYL]-1H-PYRAZOL-5-YL}-2,4-DIMETHYL-1,3-THIAZOLE
2	NA	-1	Ligand/Ion	SODIUM ION
3	NHE	1	Ligand/Ion	2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID

Biological Unit 2 (2, 2)

No.	Name	Count	Type	Full Name
1	6P2	1	Ligand/Ion	5-{3-[1-(4-METHOXYPHENYL)CYCLOPROPYL]-1H-PYRAZOL-5-YL}-2,4-DIMETHYL-1,3-THIAZOLE
2	NA	-1	Ligand/Ion	SODIUM ION
3	NHE	1	Ligand/Ion	2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LYS A:5 , GLU A:6 , TRP A:38 , ASN A:92 , HOH A:508 , TRP B:143 , LYS B:144 , ASP B:145 , HOH B:458	binding site for residue NHE A 301
2	AC2	SOFTWARE	GLY A:66 , TYR A:68 , MET A:89 , GLU A:90 , ILE A:91 , GLY A:117 , SER A:119 , GLN A:120 , HIS A:142 , TRP A:143 , ARG A:146	binding site for residue 6P2 A 302
3	AC3	SOFTWARE	ASP A:141 , ASP A:169 , ASN A:170 , HOH A:483	binding site for residue NA A 303
4	AC4	SOFTWARE	VAL A:183 , ARG A:184 , SER A:186 , PHE A:189 , HOH A:496 , HOH A:532	binding site for residue NA A 304
5	AC5	SOFTWARE	TRP A:143 , LYS A:144 , ASP A:145 , HOH A:448 , LYS B:5 , GLU B:6 , TRP B:38 , ASN B:92	binding site for residue NHE B 301
6	AC6	SOFTWARE	VAL B:183 , ARG B:184 , SER B:186 , PHE B:189 , HOH B:529 , HOH B:548	binding site for residue NA B 302
7	AC7	SOFTWARE	GLY B:66 , TYR B:68 , MET B:89 , GLU B:90 , ILE B:91 , GLY B:117 , SER B:119 , GLN B:120 , HIS B:142 , TRP B:143 , ARG B:146	binding site for residue 6P2 B 303
8	AC8	SOFTWARE	ASP B:141 , ASP B:169 , ASN B:170	binding site for residue NA B 304

(no "SS Bond" information available for 5K0J)

Asymmetric Unit

No.	Residues
1	Val A:173	-	Pro A:174
2	Val B:173	-	Pro B:174

(no "SAP(SNP)/Variant" information available for 5K0J)

(no "PROSITE Motif" information available for 5K0J)

(no "Exon" information available for 5K0J)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhh......eeeeee.hhhhhhhhhhhhhhhh....eeeee.hhhhhh.hhhhhh....eeeeee..hhhhhhhhhhhhhhh..eeeeeeeee.......hhhhhhhhhhh..eeeeeeeee......eeeeeeeee......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5k0j A   2 GDTKEQRILRYVQQNAKPGDPQSVLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQGPSSPDKS 221
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221

Chain B from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhh......eeeeee.hhhhhhhhhhhhhhhhhhh.eeeee.hhhhhh.hhhhhh....eeeeee..hhhhhhhhhhhhhhh..eeeeeeeee.......hhhhhhhhhhh..eeeeeeeee......eeeeeeeee......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5k0j B   2 GDTKEQRILRYVQQNAKPGDPQSVLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEECGLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQGPSSPDKS 221
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221

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		Val B:173 - Pro B:174	[ RasMol ]

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	5k0j
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Description

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Ligands, Modified Residues, Ions (3, 8)

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