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(-) Description

Title :  CRYSTAL STRUCTURE OF PHASEIC ACID-BOUND ABSCISIC ACID RECEPTOR PYL3 IN COMPLEX WITH TYPE 2C PROTEIN PHOSPHATASE HAB1
 
Authors :  J. K. Weng, J. P. Noel
Date :  01 May 16  (Deposition) - 07 Sep 16  (Release) - 07 Sep 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Aba Receptor, Phaseic Acid, Hab1, Pyr/Pyl, Signaling Protein- Hydrolase Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. K. Weng, M. Ye, B. Li, J. P. Noel
Co-Evolution Of Hormone Metabolism And Signaling Networks Expands Plant Adaptive Plasticity.
Cell V. 166 881 2016
PubMed-ID: 27518563  |  Reference-DOI: 10.1016/J.CELL.2016.06.027

(-) Compounds

Molecule 1 - PROTEIN PHOSPHATASE 2C 16
    Chains: B
    EC Number: 3.1.3.16
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 172-506
    Gene: HAB1, P2C-HA, AT1G72770, F28P22.4
    Organism Common: MOUSE-EAR CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Synonym: ATPP2C16,ATP2C-HA,PROTEIN HYPERSENSITIVE TO ABA 1,PROTEIN PHOSPHATASE 2C HAB1,PP2C HAB1
 
Molecule 2 - ABSCISIC ACID RECEPTOR PYL3
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 24-205
    Gene: PYL3, RCAR13, AT1G73000, F3N23.20
    Organism Common: MOUSE-EAR CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Synonym: PYR1-LIKE PROTEIN 3,REGULATORY COMPONENTS OF ABA RECEPTOR 13

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
16LM1Ligand/Ion(3S,4E)-5-[(1R,5R,8S)-8-HYDROXY-1,5-DIMETHYL-3-OXO-6-OXABICYCLO[3.2.1]OCTAN-8-YL]-3-METHYLPENT-4-ENOIC ACID
2MG2Ligand/IonMAGNESIUM ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP B:243 , ASP B:432 , ASP B:492 , MG B:602 , HOH B:710binding site for residue MG B 601
2AC2SOFTWAREASP B:243 , GLY B:244 , MG B:601 , HOH B:706 , HOH B:710binding site for residue MG B 602
3AC3SOFTWARELYS A:79 , VAL A:107 , SER A:116 , GLU A:118 , PHE A:132 , HIS A:139 , LEU A:141 , TYR A:144 , PHE A:188 , ASN A:196 , HOH A:903 , HOH A:913binding site for residue 6LM A 800

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5JO1)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Lys B:406 -Pro B:407

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JO1)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5JO1)

(-) Exons   (0, 0)

(no "Exon" information available for 5JO1)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:182
                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhh.......eeeeeeeeee..hhhhhhhhhh...hhhhh...eeeeee..............eeeeee.......eeeeeeeeee....eeeeeeee........eeeeeeeeeee....eeeeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jo1 A  21 GSHGLTKDEFSTLDSIIRTHHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNNYRSVTSVNEFVVLKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLAVIST 205
                                    30        40        50        60        70        80        90       100       110       120       130       140       150     ||163       173       183       193       203  
                                                                                                                                                                 156|                                             
                                                                                                                                                                  160                                             


Chain B from PDB  Type:PROTEIN  Length:299
                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee........eeeeeeeeeee.hhhhh..eeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh......................ee.eeeeee...eeeeeee...eeeeee..eeee........hhhhhhhhhh....eee...eee.........ee.hhhh.......eeeeee....eeeeeeehhhhhh..hhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh.....eeeeeee...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jo1 B 186 CIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRK 506
                                   195       205       215     ||237       247       257       267   ||  287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497         
                                                             221|                                  271|                                                                                                                                                                                                                                
                                                              234                                   282
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JO1)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JO1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JO1)

(-) Gene Ontology  (19, 23)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        P2C16_ARATH | Q9CAJ0: 3kb3 3nmt 3qn1 3rt0 3ujg 3zvu 4ds8 4la7 4lg5 4lga 4lgb 4wvo 5jo2
        PYL3_ARATH | Q9SSM7: 3klx 3oji 4ds8 4dsb 4dsc 4jda 5jo2

(-) Related Entries Specified in the PDB File

5jnn 5jo2