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(-) Description

Title :  CONSTITUTIVELY ACTIVE SIN RECOMBINASE CATALTYIC DOMAIN - T77II100T/Q115R
 
Authors :  C. S. Trejo, P. A. Rice
Date :  16 Jun 15  (Deposition) - 21 Dec 16  (Release) - 21 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Serine Recombinase, Site Specific Recombinase, Conformational Flexibility, Recombination (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. S. Trejo, P. A. Rice
Constitutively Active Sin Recombinase Cataltyic Domain - T77Ii100T/Q115R
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - RECOMBINASE SIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 1-128
    Gene: SIN, SAP013A_018, SAP095A_006, SAP096A_020
    Mutation: YES
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 1280

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric Unit (2, 16)
No.NameCountTypeFull Name
1MSE14Mod. Amino AcidSELENOMETHIONINE
2SO42Ligand/IonSULFATE ION
Biological Unit 1 (2, 32)
No.NameCountTypeFull Name
1MSE28Mod. Amino AcidSELENOMETHIONINE
2SO44Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:7 , SER A:9 , ARG A:66 , ARG A:69binding site for residue SO4 A 201
2AC2SOFTWAREARG B:7 , SER B:9 , GLN B:13 , ARG B:66 , ARG B:69binding site for residue SO4 B 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5C35)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5C35)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5C35)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5C35)

(-) Exons   (0, 0)

(no "Exon" information available for 5C35)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:124
                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhh...eeeeee........hhhhhhhhhhh....eeee.hhhhhh.hhhhhhhhhhhhhhh..eeee..hhhhhh...hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
                 5c35 A   1 mIIGYARVSSLDQNLERQLENLKTFGAEKIFTEKQSGKSIENRPILQKALNFVEmGDRFIVESIDRLGRNYNEVIHIVNYLKDKEVQLmITSLPmmNEVTGNPLLDKFmKDLIIRILAmVSEQE 124
                            |       10        20        30        40        50    |   60        70        80        90    || 100       110       120    
                            |                                                    55-MSE                            89-MSE ||          109-MSE   119-MSE 
                            1-MSE                                                                                        95-MSE                         
                                                                                                                          96-MSE                        


Chain B from PDB  Type:PROTEIN  Length:122
                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee......hhhhhhhhhhhhh..eeeee.......hhhhhhhhhhh....eeee.hhhhhh.hhhhhhhhhhhhhhh....ee...........hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
                 5c35 B   1 mIIGYARVSSLDQNLERQLENLKTFGAEKIFTEKGKSIENRPILQKALNFVEmGDRFIVESIDRLGRNYNEVIHIVNYLKDKEVQLmITSLPmmNEVTGNPLLDKFmKDLIIRILAmVSEQE 124
                            |       10        20        30   ||   42        52  |     62        72        82      | 92  ||   102      |112      |122  
                            1-MSE                           34|                55-MSE                            89-MSE ||          109-MSE   119-MSE 
                                                             37                                                        95-MSE                         
                                                                                                                        96-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5C35)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5C35)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5C35)

(-) Gene Ontology  (5, 8)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BIN3_STAAU | P20384: 2r0q 3pkz 5c31 5c32 5c34
        D2J612_STAAU | D2J612: 3pkz

(-) Related Entries Specified in the PDB File

2r0q A FULL-LENGTH REGULATORY TETRAMER OF THE SAME PROTEIN
3pkz THE CATALYTIC DOMAIN OF A DIFFERENT MUTANT OF THE SAME PROTEIN
5c31
5c32
5c34