5ADR - JenaLib

Title :   CRYSTAL STRUCTURE OF HUMAN TANKYRASE 2 IN COMPLEX WITH OD38

Authors :   T. Haikarainen, L. Lehtio

Date :   24 Aug 15 (Deposition) - 13 Jan 16 (Release) - 20 Jan 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym./Biol. Unit : A,B

Keywords :   Transferase, Protein-Ligand Complex, Diphtheria Toxin Like Fold, Adp- Ribosylation, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. Haikarainen, J. Waaler, A. Ignatev, Y. Nkizinkiko, H. Venkannagari, E. Obaji, S. Krauss, L. Lehtio
Development And Structural Analysis Of Adenosine Site Binding Tankyrase Inhibitors.
Bioorg. Med. Chem. Lett. V. 26 328 2016
PubMed-ID: 26706174 | Reference-DOI: 10.1016/J.BMCL.2015.12.018

Compounds

Molecule 1 - TANKYRASE-2
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PNIC28-BSA4
	Expression System Taxid	:	469008
	Expression System Variant	:	ROSETTA 2
	Expression System Vector Type	:	PLASMID
	Fragment	:	C-TERMINAL FRAGMENT, RESIDUES 946-1113
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	TANK2, ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 6, ARTD 6, POLY ADP-RIBOSE POLYMERASE 5B, TNKS-2, TRF1-INTERACTING ANKYRIN - RELATED ADP-RIBOSE POLYMERASE 2, TANKYRASE II, TANKYRASE-LIKE PROTEIN, TANKYRASE-RELATED PROTEIN

Molecule 2 - TANKYRASE-2
	Chains	:	B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PNIC28-BSA4
	Expression System Taxid	:	469008
	Expression System Variant	:	ROSETTA 2
	Expression System Vector Type	:	PLASMID
	Fragment	:	C-TERMINAL FRAGMENT, RESIDUES 1115-1162
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	TANK2, ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 6, ARTD 6, POLY ADP-RIBOSE POLYMERASE 5B, TNKS-2, TRF1-INTERACTING ANKYRIN - RELATED ADP-RIBOSE POLYMERASE 2, TANKYRASE II, TANKYRASE-LIKE PROTEIN, TANKYRASE-RELATED PROTEIN

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 5)

Sites (5, 5)

Asymmetric Unit (5, 5)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:977 , HIS A:979 , ARG A:980 , LYS A:1067 , GLN A:1070 , HOH A:3040 , HOH A:3041 , HOH A:3042 , HOH A:3146	BINDING SITE FOR RESIDUE SO4 A2114
2	AC2	SOFTWARE	ASN A:990 , ARG A:991 , HOH A:3053 , PRO B:1160 , GLU B:1161	BINDING SITE FOR RESIDUE SO4 B2162
3	AC3	SOFTWARE	HIS A:1031 , PRO A:1034 , PHE A:1035 , ALA A:1038 , ILE A:1039 , GLY A:1043 , PHE A:1044 , ASP A:1045 , HIS A:1048 , ILE A:1051 , GLY A:1053 , TYR A:1060 , TYR A:1071 , GLY A:1074 , ILE A:1075	BINDING SITE FOR RESIDUE QS5 A2115
4	AC4	SOFTWARE	CYS A:1081 , HIS A:1084 , CYS A:1089 , CYS A:1092	BINDING SITE FOR RESIDUE ZN A2116
5	AC5	SOFTWARE	PHE A:1030 , HIS A:1031 , GLY A:1032 , TYR A:1060 , SER A:1068	BINDING SITE FOR RESIDUE BCT A2117

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:162
                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeee....hhhhhhhhhhhhhh................eeeeeeeeeehhhhhhhhhhhhhhhhhh......eeeeee...hhhhhhhhh.hhhhh.........eeee.hhhhhhh...hhhhh...............eeeeeeeee...eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5adr A  952 GTILIDLSPDDKEFQSVEEEMQSTVREHRDGGHAGGIFNRYNILKIQKVCNKKLWERYTHRRKEVSEENHNHANERMLFHGSPFVNAIIHKGFDERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPVHKDRSCYICHRQLLFCRVTLGKSFLQFSAM 1113
                                   961       971       981       991      1001      1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111

Chain B from PDB  Type:PROTEIN  Length:46
                                                                               
               SCOP domains ---------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeee........eeee.hhh.eeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------- PROSITE
                 Transcript ---------------------------------------------- Transcript
                5adr B 1116 AHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYLITYQIMRPE 1161
                                  1125      1135      1145      1155

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (29, 29)

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Description