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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN BFL-1 IN COMPLEX WITH TBID BH3 PEPTIDE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET HX9247
 
Authors :  R. Guan, R. Xiao, L. Mao, G. T. Montelione, Northeast Structural Geno Consortium (Nesg)
Date :  20 Apr 15  (Deposition) - 06 May 15  (Release) - 20 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Apoptosis, Bcl-2 Family, Complex, Bh3 Only, Structural Genomics, Psi- Biology, Northeast Structural Genomics Consortium, Nesg (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Guan, R. Xiao, L. Mao, C. Gelinas, G. T. Montelione
Crystal Structure Of Human Bfl-1 In Complex With Tbid Bh3 Peptide
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - BCL-2-RELATED PROTEIN A1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BCL2A1, BCL2L5, BFL1, GRS, HBPA1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: BCL-2-LIKE PROTEIN 5,BCL2-L-5,HEMOPOIETIC-SPECIFIC EARLY RESPONSE PROTEIN,PROTEIN BFL-1,PROTEIN GRS
 
Molecule 2 - BH3-INTERACTING DOMAIN DEATH AGONIST
    Chains: B
    Engineered: YES
    Fragment: UNP RESIDUES 125-150
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: P22 BID,BID
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4ZEQ)

(-) Sites  (0, 0)

(no "Site" information available for 4ZEQ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ZEQ)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Gly A:27 -Ser A:28

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ZEQ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ZEQ)

(-) Exons   (0, 0)

(no "Exon" information available for 4ZEQ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:149
                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zeq A   3 DCEFGYIYRLAQDYLQCVLQIPQPGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNVVSVDTARTLFNQVMEKEFEDGIINWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNNTGEWIRQNGGWENGFVKKFEPK 151
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142         


Chain B from PDB  Type:PROTEIN  Length:26
                                                          
               SCOP domains -------------------------- SCOP domains
               CATH domains -------------------------- CATH domains
               Pfam domains -------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------- SAPs(SNPs)
                    PROSITE -------------------------- PROSITE
                 Transcript -------------------------- Transcript
                 4zeq B  79 QEDIIRNIARHLAQVGDSMDRSIPPG 104
                                    88        98
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZEQ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ZEQ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ZEQ)

(-) Gene Ontology  (48, 55)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Gly A:27 - Ser A:28   [ RasMol ]  
 

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  BID_HUMAN | P55957
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        B2LA1_HUMAN | Q16548: 2vm6 3i1h 3mqp 5uuk 5uul 5uup
        BID_HUMAN | P55957: 1zy3 2bid 2kbw 2m5b 2m5i 4bd2 4qve 4zig 4zii 5ajj 5c3f

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4ZEQ)