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(-) Description

Title :  CRYSTAL STRUCTURE OF MYC3[44-238] FROM ARABIDOPSIS IN COMPLEX WITH JAZ1 PEPTIDE [200-221]
 
Authors :  J. Ke, F. Zhang, J. Brunzelle, H. E. Xu, K. Melcher, S. Y. He
Date :  24 Mar 15  (Deposition) - 05 Aug 15  (Release) - 23 Sep 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Jasmonate Signaling Pathway, Myc3 Transcription Factor, Jaz1 Repressor, Plant Transcriptional Regulation, Transcription Regulator (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Zhang, J. Yao, J. Ke, L. Zhang, V. Q. Lam, X. F. Xin, X. E. Zhou, J. Chen, J. Brunzelle, P. R. Griffin, M. Zhou, H. E. Xu, K. Melcher, S. Y. He
Structural Basis Of Jaz Repression Of Myc Transcription Factors In Jasmonate Signalling.
Nature V. 525 269 2015
PubMed-ID: 26258305  |  Reference-DOI: 10.1038/NATURE14661

(-) Compounds

Molecule 1 - TRANSCRIPTION FACTOR MYC3
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PSUMO
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 44-238
    Gene: MYC3, ATR2, BHLH5, EN36, AT5G46760, MZA15.18
    Organism Common: MOUSE-EAR CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Synonym: BASIC HELIX-LOOP-HELIX PROTEIN 5,BHLH 5,PROTEIN ALTERED TRYPTOPHAN REGULATION 2,TRANSCRIPTION FACTOR ATR2,TRANSCRIPTION FACTOR EN 36,BHLH TRANSCRIPTION FACTOR BHLH005
 
Molecule 2 - PROTEIN TIFY 10A
    Chains: B
    Engineered: YES
    Fragment: UNP RESIDUES 200-221
    Organism Common: MOUSE-EAR CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Synonym: JASMONATE ZIM DOMAIN-CONTAINING PROTEIN 1
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4YZ6)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:175
                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhh.....eeeeeeeeeee......eeeeeeeeeeee....hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh..eee..hhhhhhhhhhh.eeeeehhhhhhh..hhhhhhhhhh...eeeeeee..eeeeeee......hhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4yz6 A  44 QPQFNEDTLQQRLQALIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGETNTAEQEHRKRVIRELNSLISEEVTDTEWFFLVSMTQSFVNGVGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSSEVISQSSDLMHKVNNLFNFN 238
                                    53        63        73        83        93      |112       122       143       153       163       173       183       193       203       213       223       233     
                                                                                  100|                 130|                                                                                                
                                                                                   110                  142                                                                                                


Chain B from PDB  Type:PROTEIN  Length:18
                                                  
               SCOP domains ------------------ SCOP domains
               CATH domains ------------------ CATH domains
               Pfam domains ------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------ SAPs(SNPs)
                    PROSITE ------------------ PROSITE
                 Transcript ------------------ Transcript
                 4yz6 B 201 LPIARRASLHRFLEKRKD 218
                                   210
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4YZ6)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4YZ6)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4YZ6)

(-) Gene Ontology  (22, 28)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MYC3_ARATH | Q9FIP9: 4rqw 4rru 4rs9 4ywc 5t0f 5t0q
        TI10A_ARATH | Q9LMA8: 3ogk 3ogl 3ogm

(-) Related Entries Specified in the PDB File

4rqw 4rru 4rs9