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(-) Description

Title :  STRUCTURE OF COI1-ASK1 IN COMPLEX WITH CORONATINE AND AN INCOMPLETE JAZ1 DEGRON
 
Authors :  L. B. Sheard, X. Tan, H. Mao, J. Withers, G. Ben-Nissan, T. R. Hinds, F. Hs M. Sharon, J. Browse, S. Y. He, J. Rizo, G. A. Howe, N. Zheng
Date :  16 Aug 10  (Deposition) - 13 Oct 10  (Release) - 15 Dec 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,U,V,W,X
Keywords :  Leucine Rich Repeat, Ubiquitin Ligase, Scf, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  L. B. Sheard, X. Tan, H. Mao, J. Withers, G. Ben-Nissan, T. R. Hinds, Y. Kobayashi, F. F. Hsu, M. Sharon, J. Browse, S. Y. He, J. Rizo, G. A. Howe, N. Zheng
Jasmonate Perception By Inositol-Phosphate-Potentiated Coi1-Jaz Co-Receptor.
Nature V. 468 400 2010
PubMed-ID: 20927106  |  Reference-DOI: 10.1038/NATURE09430

(-) Compounds

Molecule 1 - SKP1-LIKE PROTEIN 1A
    ChainsA, C, E, G, I, K, M, O
    EngineeredYES
    Expression SystemSPODOPTERA FRUGIPERDA
    Expression System Taxid7108
    GeneSKP1A, ASK1, SKP1, UIP1, AT1G75950, T4O12.17
    Organism CommonMOUSE-EAR CRESS,THALE-CRESS
    Organism ScientificARABIDOPSIS THALIANA
    Organism Taxid3702
    SynonymSKP1-LIKE 1, UFO-BINDING PROTEIN 1
 
Molecule 2 - CORONATINE-INSENSITIVE PROTEIN 1
    ChainsB, D, F, H, J, L, N, P
    EngineeredYES
    Expression SystemSPODOPTERA FRUGIPERDA
    Expression System Taxid7108
    GeneCOI1, FBL2, AT2G39940, T28M21.10
    Organism CommonMOUSE-EAR CRESS,THALE-CRESS
    Organism ScientificARABIDOPSIS THALIANA
    Organism Taxid3702
    SynonymF-BOX/LRR-REPEAT PROTEIN 2, ATFBL2, ATCOI1, COI-1
 
Molecule 3 - JAZ1 INCOMPLETE DEGRON PEPTIDE
    ChainsQ, R, S, U, V, W, X
    EngineeredYES
    FragmentUNP RESIDUES 139-160
    Organism ScientificARABIDOPSIS THALIANA
    Organism Taxid3702
    SyntheticYES

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920212223
Asymmetric/Biological Unit ABCDEFGHIJKLMNOPQRSUVWX

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 40)

Asymmetric/Biological Unit (2, 40)
No.NameCountTypeFull Name
1OGK8Ligand/Ion(1S,2S)-2-ETHYL-1-({[(3AS,4S,6R,7AS)-6-ETHYL-1-OXOOCTAHYDRO-1H-INDEN-4-YL]CARBONYL}AMINO)CYCLOPROPANECARBOXYLIC ACID
2PO432Ligand/IonPHOSPHATE ION

(-) Sites  (40, 40)

Asymmetric Unit (40, 40)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG B:85 , ALA B:86 , PHE B:89 , ARG B:348 , ALA B:384 , VAL B:385 , TYR B:386 , ARG B:409 , VAL B:411 , TYR B:444 , LEU B:469 , ARG B:496 , TRP B:519BINDING SITE FOR RESIDUE OGK B 1100
02AC2SOFTWAREARG B:85 , ARG B:120 , ARG B:409 , PO4 B:1102 , PO4 B:1103BINDING SITE FOR RESIDUE PO4 B 1101
03AC3SOFTWAREARG B:120 , LYS B:147 , PO4 B:1101 , ARG Q:206BINDING SITE FOR RESIDUE PO4 B 1102
04AC4SOFTWARELYS B:81 , ARG B:120 , ARG B:121 , ARG B:440 , LYS B:492 , PO4 B:1101BINDING SITE FOR RESIDUE PO4 B 1103
05AC5SOFTWAREHIS B:54 , LYS B:79 , HIS B:118 , LYS B:144BINDING SITE FOR RESIDUE PO4 B 1104
06AC6SOFTWAREARG D:85 , ALA D:86 , PHE D:89 , ARG D:348 , VAL D:385 , TYR D:386 , ARG D:409 , VAL D:411 , LEU D:469 , ARG D:496 , TRP D:519 , PO4 D:1101BINDING SITE FOR RESIDUE OGK D 1100
07AC7SOFTWAREARG D:85 , MET D:88 , ARG D:120 , ARG D:409 , OGK D:1100 , PO4 D:1102 , PO4 D:1103BINDING SITE FOR RESIDUE PO4 D 1101
08AC8SOFTWAREARG D:120 , LYS D:147 , PO4 D:1101 , ARG R:206BINDING SITE FOR RESIDUE PO4 D 1102
09AC9SOFTWARELYS D:81 , ARG D:120 , ARG D:121 , ARG D:440 , LYS D:492 , PO4 D:1101BINDING SITE FOR RESIDUE PO4 D 1103
10BC1SOFTWAREHIS D:54 , LYS D:79 , HIS D:118 , LYS D:144BINDING SITE FOR RESIDUE PO4 D 1104
11BC2SOFTWAREARG F:85 , PHE F:89 , ARG F:348 , VAL F:385 , TYR F:386 , ARG F:409 , VAL F:411 , TYR F:444 , LEU F:469 , ARG F:496 , TRP F:519BINDING SITE FOR RESIDUE OGK F 1100
12BC3SOFTWAREARG F:85 , ARG F:120 , ARG F:409 , PO4 F:1102 , PO4 F:1103BINDING SITE FOR RESIDUE PO4 F 1101
13BC4SOFTWAREARG F:120 , LYS F:147 , PO4 F:1101 , ARG S:206BINDING SITE FOR RESIDUE PO4 F 1102
14BC5SOFTWARELYS F:81 , ARG F:85 , ARG F:120 , ARG F:121 , ARG F:440 , LYS F:492 , PO4 F:1101BINDING SITE FOR RESIDUE PO4 F 1103
15BC6SOFTWAREHIS F:54 , LYS F:79 , HIS F:118 , LYS F:144BINDING SITE FOR RESIDUE PO4 F 1104
16BC7SOFTWAREARG H:85 , ALA H:86 , PHE H:89 , LEU H:91 , ARG H:348 , TYR H:386 , ARG H:409 , VAL H:411 , LEU H:469 , ARG H:496 , TRP H:519BINDING SITE FOR RESIDUE OGK H 1100
17BC8SOFTWAREARG H:85 , ARG H:120 , ARG H:409 , PO4 H:1102 , PO4 H:1103BINDING SITE FOR RESIDUE PO4 H 1101
18BC9SOFTWAREARG H:120 , LYS H:147 , PO4 H:1101BINDING SITE FOR RESIDUE PO4 H 1102
19CC1SOFTWARELYS H:81 , ARG H:85 , ARG H:120 , ARG H:121 , PO4 H:1101BINDING SITE FOR RESIDUE PO4 H 1103
20CC2SOFTWAREHIS H:54 , LYS H:79 , HIS H:118 , LYS H:144BINDING SITE FOR RESIDUE PO4 H 1104
21CC3SOFTWAREARG J:85 , PHE J:89 , LEU J:91 , ARG J:348 , ALA J:384 , VAL J:385 , TYR J:386 , ARG J:409 , VAL J:411 , LEU J:469 , ARG J:496 , TRP J:519 , ARG U:205BINDING SITE FOR RESIDUE OGK J 1100
22CC4SOFTWAREARG J:85 , ARG J:120 , ARG J:409 , PO4 J:1102 , PO4 J:1103BINDING SITE FOR RESIDUE PO4 J 1101
23CC5SOFTWAREARG J:120 , LYS J:147 , PO4 J:1101 , ARG U:206BINDING SITE FOR RESIDUE PO4 J 1102
24CC6SOFTWARELYS J:81 , ARG J:120 , ARG J:121 , LYS J:492 , PO4 J:1101BINDING SITE FOR RESIDUE PO4 J 1103
25CC7SOFTWAREHIS J:54 , LYS J:79 , HIS J:118 , LYS J:144BINDING SITE FOR RESIDUE PO4 J 1104
26CC8SOFTWAREARG L:85 , ALA L:86 , PHE L:89 , ARG L:348 , ALA L:384 , VAL L:385 , TYR L:386 , ARG L:409 , TYR L:444 , LEU L:469 , ARG L:496 , TRP L:519BINDING SITE FOR RESIDUE OGK L 1100
27CC9SOFTWAREARG L:85 , ARG L:120 , ARG L:409 , PO4 L:1102 , PO4 L:1103 , ARG V:206BINDING SITE FOR RESIDUE PO4 L 1101
28DC1SOFTWAREARG L:120 , LYS L:147 , PO4 L:1101 , ARG V:206BINDING SITE FOR RESIDUE PO4 L 1102
29DC2SOFTWARELYS L:81 , ARG L:120 , ARG L:121 , PO4 L:1101BINDING SITE FOR RESIDUE PO4 L 1103
30DC3SOFTWAREHIS L:54 , LYS L:79 , HIS L:118 , LYS L:144BINDING SITE FOR RESIDUE PO4 L 1104
31DC4SOFTWAREARG N:85 , PHE N:89 , ARG N:348 , VAL N:385 , TYR N:386 , ARG N:409 , VAL N:411 , TYR N:444 , LEU N:469 , ARG N:496 , TRP N:519BINDING SITE FOR RESIDUE OGK N 1100
32DC5SOFTWAREARG N:85 , ARG N:120 , ARG N:409 , PO4 N:1102 , PO4 N:1103BINDING SITE FOR RESIDUE PO4 N 1101
33DC6SOFTWAREARG N:120 , LYS N:147 , PO4 N:1101 , ARG W:206BINDING SITE FOR RESIDUE PO4 N 1102
34DC7SOFTWARELYS N:81 , ARG N:85 , ARG N:120 , ARG N:121 , ARG N:440 , LYS N:492 , PO4 N:1101BINDING SITE FOR RESIDUE PO4 N 1103
35DC8SOFTWAREHIS N:54 , LYS N:79 , HIS N:118 , LYS N:144BINDING SITE FOR RESIDUE PO4 N 1104
36DC9SOFTWAREARG P:85 , ALA P:86 , PHE P:89 , ARG P:348 , VAL P:385 , TYR P:386 , ARG P:409 , VAL P:411 , TYR P:444 , LEU P:469 , ARG P:496 , TRP P:519BINDING SITE FOR RESIDUE OGK P 1100
37EC1SOFTWAREARG P:85 , MET P:88 , ARG P:120 , ARG P:409 , PO4 P:1102 , PO4 P:1103BINDING SITE FOR RESIDUE PO4 P 1101
38EC2SOFTWAREARG P:120 , LYS P:147 , PO4 P:1101 , ARG X:206BINDING SITE FOR RESIDUE PO4 P 1102
39EC3SOFTWARELYS P:81 , ARG P:85 , ARG P:120 , ARG P:121 , PO4 P:1101BINDING SITE FOR RESIDUE PO4 P 1103
40EC4SOFTWAREHIS P:54 , LYS P:79 , HIS P:118 , LYS P:144BINDING SITE FOR RESIDUE PO4 P 1104

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3OGK)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3OGK)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3OGK)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3OGK)

(-) Exons   (0, 0)

(no "Exon" information available for 3OGK)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:145
 aligned with SKP1A_ARATH | Q39255 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:156
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154      
          SKP1A_ARATH     5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee.....eeeehhhhhh.hhhhhh....hhhhhhee....hhhhhhhhhhhhhhhhh....-----------hhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ogk A   5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAAS-----------DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
                                    14        24        34        44        54        64   |     -     |  84        94       104       114       124       134       144       154      
                                                                                          68          80                                                                                

Chain B from PDB  Type:PROTEIN  Length:566
 aligned with COI1_ARATH | O04197 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:581
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591 
           COI1_ARATH    12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhh....eeeee..hhhhhhh.........hhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhh.eeeee..eeeehhhhhhhhhhh....eee....eee...hhhhhhhhhhh....eee.........hhhhhhhhhhhh....eee....hhhhhhhhhhhh....eeee.......................eeee......hhhhhhhhhhhh.eeeehhh..hhhhhhhhhh......eeeee..hhhhhhhhhhhhh....eeeee...............hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhh....eeeeee...........hhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhh......eeeee....hhhhhhhhhhhh....eeeee.........hhhhhh...eeeeee...---------------...eeeeee.............ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ogk B  12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR---------------HPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541      |  -         -  |    571       581       591 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  548             564                            

Chain C from PDB  Type:PROTEIN  Length:145
 aligned with SKP1A_ARATH | Q39255 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:156
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154      
          SKP1A_ARATH     5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee.....eeeehhhhhh.hhhhhh....hhhhhhee....hhhhhhhhhhhhhhhhh....-----------..hhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ogk C   5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAAS-----------DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
                                    14        24        34        44        54        64   |     -     |  84        94       104       114       124       134       144       154      
                                                                                          68          80                                                                                

Chain D from PDB  Type:PROTEIN  Length:566
 aligned with COI1_ARATH | O04197 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:581
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591 
           COI1_ARATH    12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhh....eeeee..hhhhhhh.........hhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhh.eeeee..eeeehhhhhhhhhhh....eee....eee...hhhhhhhhhhh....eee.........hhhhhhhhhhhh....eee....hhhhhhhhhhhh....eeee.......................eeee......hhhhhhhhhhhh.eeeehhh..hhhhhhhhhh......eeeee..hhhhhhhhhhhhh....eeeee...............hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhh....eeeeee...........hhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhh.......eeeee....hhhhhhhhhhhh....eeeee.........hhhhhh...eeeeee...---------------...eeeeee.............ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ogk D  12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR---------------HPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541      |  -         -  |    571       581       591 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  548             564                            

Chain E from PDB  Type:PROTEIN  Length:145
 aligned with SKP1A_ARATH | Q39255 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:156
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154      
          SKP1A_ARATH     5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee.....eeeehhhhhh.hhhhhh....hhhhhhee....hhhhhhhhhhhhhhhhh....-----------hhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ogk E   5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAAS-----------DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
                                    14        24        34        44        54        64   |     -     |  84        94       104       114       124       134       144       154      
                                                                                          68          80                                                                                

Chain F from PDB  Type:PROTEIN  Length:566
 aligned with COI1_ARATH | O04197 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:581
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591 
           COI1_ARATH    12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhh....eeeee..hhhhhhh.........hhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhh.eeeee..eeeehhhhhhhhhhh....eee....eee...hhhhhhhhhhh....eee.........hhhhhhhhhhhh....eee....hhhhhhhhhhhh....eeee.......................eeee......hhhhhhhhhhhh.eeee.....hhhhhhhhhh......eeee...hhhhhhhhhhhhh....eeee................hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhh....eeeeee...........hhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhh......eeeee....hhhhhhhhhhhh....eeeee.........hhhhhh...eeeeee...---------------...eeeeee.............ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ogk F  12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR---------------HPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541      |  -         -  |    571       581       591 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  548             564                            

Chain G from PDB  Type:PROTEIN  Length:145
 aligned with SKP1A_ARATH | Q39255 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:156
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154      
          SKP1A_ARATH     5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee.....eeeehhhhhh.hhhhhh....hhhhhhee....hhhhhhhhhhhhhhhhh....-----------..hhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhh.....hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ogk G   5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAAS-----------DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
                                    14        24        34        44        54        64   |     -     |  84        94       104       114       124       134       144       154      
                                                                                          68          80                                                                                

Chain H from PDB  Type:PROTEIN  Length:562
 aligned with COI1_ARATH | O04197 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:578
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581        
           COI1_ARATH    12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLK 589
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhh....eeeee..hhhhhhh..hhhhh..hhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhh.eeeee..eeeehhhhhhhhhhh....eee....eee...hhhhhhhhhhh....eee.........hhhhhhhhhh......eee....hhhhhhhhhhhh....eeee.......................eeee......hhhhhhhhhhhh.ee.......hhhhhhhhhh......eeee...hhhhhhhhhhhhh....eeee................hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhh....eeeeee...........hhhhhhhhhhhh....eeeee......hhhhhhhhhhh.....eeee.....hhhhhhhhhh......eeeee....hhhhhhhhhhhh....eeeee..................eeeeee...----------------..eeeeee.............ee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ogk H  12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR----------------PAHILAYYSLAGQRTDCPTTVRVLK 589
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541      |  -         -   |   571       581        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  548              565                        

Chain I from PDB  Type:PROTEIN  Length:145
 aligned with SKP1A_ARATH | Q39255 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:156
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154      
          SKP1A_ARATH     5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee.....eeeehhhhhh.hhhhhh....hhhhhhee....hhhhhhhhhhhhhhhhh....-----------hhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ogk I   5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAAS-----------DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
                                    14        24        34        44        54        64   |     -     |  84        94       104       114       124       134       144       154      
                                                                                          68          80                                                                                

Chain J from PDB  Type:PROTEIN  Length:566
 aligned with COI1_ARATH | O04197 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:581
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591 
           COI1_ARATH    12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhh....eeeee..hhhhhhh..hhhhh..hhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhh.eeeee..eeeehhhhhhhhhhh....eee....eee...hhhhhhhhhhh....eee.........hhhhhhhhhhhh....eee....hhhhhhhhhhhh....eeee.......................eeee......hhhhhhhhhhhh.eeee.....hhhhhhhhhh......eeeee..hhhhhhhhhhhhh....eeeee...............hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhh....eeeeee...........hhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhh......eeeee....hhhhhhhhhhhh....eeeee.........hhhhhh...eeeeee...---------------...eeeeee.............ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ogk J  12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR---------------HPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541      |  -         -  |    571       581       591 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  548             564                            

Chain K from PDB  Type:PROTEIN  Length:145
 aligned with SKP1A_ARATH | Q39255 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:156
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154      
          SKP1A_ARATH     5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee.....eeeehhhhhh.hhhhhh....hhhhhhee....hhhhhhhhhhhhhhhhh....-----------..hhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ogk K   5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAAS-----------DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
                                    14        24        34        44        54        64   |     -     |  84        94       104       114       124       134       144       154      
                                                                                          68          80                                                                                

Chain L from PDB  Type:PROTEIN  Length:566
 aligned with COI1_ARATH | O04197 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:581
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591 
           COI1_ARATH    12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhh....eeeee..hhhhhhh.........hhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhh.eeeee..eeeehhhhhhhhhhh....eee....eee...hhhhhhhhhhh....eee.........hhhhhhhhhhhh....eee....hhhhhhhhhhhh....eeee.......................eeee......hhhhhhhhhhhh.eeeehhh..hhhhhhhhhh......eeeee..hhhhhhhhhhhhh....eeeee...............hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhh....eeeeee...........hhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhh.......eeeee....hhhhhhhhhhhh....eeeee.........hhhhhh...eeeeee...---------------...eeeeee.............ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ogk L  12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR---------------HPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541      |  -         -  |    571       581       591 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  548             564                            

Chain M from PDB  Type:PROTEIN  Length:145
 aligned with SKP1A_ARATH | Q39255 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:156
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154      
          SKP1A_ARATH     5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee.....eeeehhhhhh.hhhhhh....hhhhhhee....hhhhhhhhhhhhhhhhh....-----------hhhhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ogk M   5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAAS-----------DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
                                    14        24        34        44        54        64   |     -     |  84        94       104       114       124       134       144       154      
                                                                                          68          80                                                                                

Chain N from PDB  Type:PROTEIN  Length:566
 aligned with COI1_ARATH | O04197 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:581
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591 
           COI1_ARATH    12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhh....eeeee..hhhhhhh.........hhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhh.eeeee..eeeehhhhhhhhhhh....eee....eee...hhhhhhhhhhh....eee.........hhhhhhhhhhhh....eee....hhhhhhhhhhhh....eeee.......................eeee......hhhhhhhhhhhh.eeee.....hhhhhhhhhh......eeeee..hhhhhhhhhhhhh....eeeee...............hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhh....eeeeee...........hhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhh.......eeeee....hhhhhhhhhhhh....eeeee.........hhhhhh...eeeeee...---------------...eeeeee.............ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ogk N  12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR---------------HPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541      |  -         -  |    571       581       591 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  548             564                            

Chain O from PDB  Type:PROTEIN  Length:145
 aligned with SKP1A_ARATH | Q39255 from UniProtKB/Swiss-Prot  Length:160

    Alignment length:156
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154      
          SKP1A_ARATH     5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) Skp1_POZ-3ogkO01 O:5-64                                     ------------------Skp1-3ogkO09 O:83-160                                                          Pfam domains (1)
           Pfam domains (2) Skp1_POZ-3ogkO02 O:5-64                                     ------------------Skp1-3ogkO10 O:83-160                                                          Pfam domains (2)
           Pfam domains (3) Skp1_POZ-3ogkO03 O:5-64                                     ------------------Skp1-3ogkO11 O:83-160                                                          Pfam domains (3)
           Pfam domains (4) Skp1_POZ-3ogkO04 O:5-64                                     ------------------Skp1-3ogkO12 O:83-160                                                          Pfam domains (4)
           Pfam domains (5) Skp1_POZ-3ogkO05 O:5-64                                     ------------------Skp1-3ogkO13 O:83-160                                                          Pfam domains (5)
           Pfam domains (6) Skp1_POZ-3ogkO06 O:5-64                                     ------------------Skp1-3ogkO14 O:83-160                                                          Pfam domains (6)
           Pfam domains (7) Skp1_POZ-3ogkO07 O:5-64                                     ------------------Skp1-3ogkO15 O:83-160                                                          Pfam domains (7)
           Pfam domains (8) Skp1_POZ-3ogkO08 O:5-64                                     ------------------Skp1-3ogkO16 O:83-160                                                          Pfam domains (8)
         Sec.struct. author .eeee.....eeeehhhhhh.hhhhhh....hhhhhhee....hhhhhhhhhhhhhhhhh....-----------..hhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhh.......hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ogk O   5 KIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAAS-----------DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
                                    14        24        34        44        54        64   |     -     |  84        94       104       114       124       134       144       154      
                                                                                          68          80                                                                                

Chain P from PDB  Type:PROTEIN  Length:566
 aligned with COI1_ARATH | O04197 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:581
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591 
           COI1_ARATH    12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhh.eeee.hhhhhhhhhhhhhh....eeeee..hhhhhhh.........hhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhh.eeeee..eeeehhhhhhhhhhh....eee....eee...hhhhhhhhhhh....eee.........hhhhhhhhhhhh....eee....hhhhhhhhhhhh....eeee.......................eeee......hhhhhhhhhhhh.eeeehhh..hhhhhhhhhh......eeeee..hhhhhhhhhhhhh....eeeee...............hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhh....eeeeee...........hhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhh......eeeee....hhhhhhhhhhhh....eeeee.........hhhhhh...eeeeee...---------------...eeeeee.............ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ogk P  12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR---------------HPAHILAYYSLAGQRTDCPTTVRVLKEPI 592
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541      |  -         -  |    571       581       591 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  548             564                            

Chain Q from PDB  Type:PROTEIN  Length:13
 aligned with Q3ED96_ARATH | Q3ED96 from UniProtKB/TrEMBL  Length:187

    Alignment length:13
                                   148   
         Q3ED96_ARATH   139 RRASLHRFLEKRK 151
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk Q 205 RRASLHRFLEKRK 217
                                   214   

Chain Q from PDB  Type:PROTEIN  Length:13
 aligned with TI10A_ARATH | Q9LMA8 from UniProtKB/Swiss-Prot  Length:253

    Alignment length:13
                                   214   
          TI10A_ARATH   205 RRASLHRFLEKRK 217
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk Q 205 RRASLHRFLEKRK 217
                                   214   

Chain R from PDB  Type:PROTEIN  Length:13
 aligned with Q3ED96_ARATH | Q3ED96 from UniProtKB/TrEMBL  Length:187

    Alignment length:13
                                   148   
         Q3ED96_ARATH   139 RRASLHRFLEKRK 151
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk R 205 RRASLHRFLEKRK 217
                                   214   

Chain R from PDB  Type:PROTEIN  Length:13
 aligned with TI10A_ARATH | Q9LMA8 from UniProtKB/Swiss-Prot  Length:253

    Alignment length:13
                                   214   
          TI10A_ARATH   205 RRASLHRFLEKRK 217
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk R 205 RRASLHRFLEKRK 217
                                   214   

Chain S from PDB  Type:PROTEIN  Length:13
 aligned with Q3ED96_ARATH | Q3ED96 from UniProtKB/TrEMBL  Length:187

    Alignment length:13
                                   148   
         Q3ED96_ARATH   139 RRASLHRFLEKRK 151
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk S 205 RRASLHRFLEKRK 217
                                   214   

Chain S from PDB  Type:PROTEIN  Length:13
 aligned with TI10A_ARATH | Q9LMA8 from UniProtKB/Swiss-Prot  Length:253

    Alignment length:13
                                   214   
          TI10A_ARATH   205 RRASLHRFLEKRK 217
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk S 205 RRASLHRFLEKRK 217
                                   214   

Chain U from PDB  Type:PROTEIN  Length:13
 aligned with Q3ED96_ARATH | Q3ED96 from UniProtKB/TrEMBL  Length:187

    Alignment length:13
                                   148   
         Q3ED96_ARATH   139 RRASLHRFLEKRK 151
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk U 205 RRASLHRFLEKRK 217
                                   214   

Chain U from PDB  Type:PROTEIN  Length:13
 aligned with TI10A_ARATH | Q9LMA8 from UniProtKB/Swiss-Prot  Length:253

    Alignment length:13
                                   214   
          TI10A_ARATH   205 RRASLHRFLEKRK 217
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk U 205 RRASLHRFLEKRK 217
                                   214   

Chain V from PDB  Type:PROTEIN  Length:13
 aligned with Q3ED96_ARATH | Q3ED96 from UniProtKB/TrEMBL  Length:187

    Alignment length:13
                                   148   
         Q3ED96_ARATH   139 RRASLHRFLEKRK 151
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk V 205 RRASLHRFLEKRK 217
                                   214   

Chain V from PDB  Type:PROTEIN  Length:13
 aligned with TI10A_ARATH | Q9LMA8 from UniProtKB/Swiss-Prot  Length:253

    Alignment length:13
                                   214   
          TI10A_ARATH   205 RRASLHRFLEKRK 217
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk V 205 RRASLHRFLEKRK 217
                                   214   

Chain W from PDB  Type:PROTEIN  Length:13
 aligned with Q3ED96_ARATH | Q3ED96 from UniProtKB/TrEMBL  Length:187

    Alignment length:13
                                   148   
         Q3ED96_ARATH   139 RRASLHRFLEKRK 151
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk W 205 RRASLHRFLEKRK 217
                                   214   

Chain W from PDB  Type:PROTEIN  Length:13
 aligned with TI10A_ARATH | Q9LMA8 from UniProtKB/Swiss-Prot  Length:253

    Alignment length:13
                                   214   
          TI10A_ARATH   205 RRASLHRFLEKRK 217
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk W 205 RRASLHRFLEKRK 217
                                   214   

Chain X from PDB  Type:PROTEIN  Length:13
 aligned with Q3ED96_ARATH | Q3ED96 from UniProtKB/TrEMBL  Length:187

    Alignment length:13
                                   148   
         Q3ED96_ARATH   139 RRASLHRFLEKRK 151
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
           Pfam domains (1) CCT_2-3ogkX01 Pfam domains (1)
           Pfam domains (2) CCT_2-3ogkX02 Pfam domains (2)
           Pfam domains (3) CCT_2-3ogkX03 Pfam domains (3)
           Pfam domains (4) CCT_2-3ogkX04 Pfam domains (4)
           Pfam domains (5) CCT_2-3ogkX05 Pfam domains (5)
           Pfam domains (6) CCT_2-3ogkX06 Pfam domains (6)
           Pfam domains (7) CCT_2-3ogkX07 Pfam domains (7)
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk X 205 RRASLHRFLEKRK 217
                                   214   

Chain X from PDB  Type:PROTEIN  Length:13
 aligned with TI10A_ARATH | Q9LMA8 from UniProtKB/Swiss-Prot  Length:253

    Alignment length:13
                                   214   
          TI10A_ARATH   205 RRASLHRFLEKRK 217
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
           Pfam domains (1) CCT_2-3ogkX01 Pfam domains (1)
           Pfam domains (2) CCT_2-3ogkX02 Pfam domains (2)
           Pfam domains (3) CCT_2-3ogkX03 Pfam domains (3)
           Pfam domains (4) CCT_2-3ogkX04 Pfam domains (4)
           Pfam domains (5) CCT_2-3ogkX05 Pfam domains (5)
           Pfam domains (6) CCT_2-3ogkX06 Pfam domains (6)
           Pfam domains (7) CCT_2-3ogkX07 Pfam domains (7)
         Sec.struct. author ...hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 3ogk X 205 RRASLHRFLEKRK 217
                                   214   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3OGK)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3OGK)

(-) Pfam Domains  (3, 23)

Asymmetric/Biological Unit
(-)
Clan: CCT (3)
1aCCT_2-3ogkX01X:205-217
1bCCT_2-3ogkX02X:205-217
1cCCT_2-3ogkX03X:205-217
1dCCT_2-3ogkX04X:205-217
1eCCT_2-3ogkX05X:205-217
1fCCT_2-3ogkX06X:205-217
1gCCT_2-3ogkX07X:205-217
(-)
Clan: POZ (36)
(-)
Family: Skp1 (15)
3aSkp1-3ogkO09O:83-160
3bSkp1-3ogkO10O:83-160
3cSkp1-3ogkO11O:83-160
3dSkp1-3ogkO12O:83-160
3eSkp1-3ogkO13O:83-160
3fSkp1-3ogkO14O:83-160
3gSkp1-3ogkO15O:83-160
3hSkp1-3ogkO16O:83-160

(-) Gene Ontology  (42, 51)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,C,E,G,I,K,M,O   (SKP1A_ARATH | Q39255)
molecular function
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0009734    auxin-activated signaling pathway    A series of molecular signals generated by the binding of the plant hormone auxin to a receptor, and ending with modulation of a downstream cellular process, e.g. transcription.
    GO:0007059    chromosome segregation    The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. In eukaryotes, chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles.
    GO:0009873    ethylene-activated signaling pathway    A series of molecular signals generated by the reception of ethylene (ethene, C2H4) by a receptor and ending with modulation of a cellular process, e.g. transcription.
    GO:0000226    microtubule cytoskeleton organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
    GO:0007275    multicellular organism development    The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
    GO:0045910    negative regulation of DNA recombination    Any process that stops, prevents, or reduces the frequency, rate or extent of DNA recombination.
    GO:0016567    protein ubiquitination    The process in which one or more ubiquitin groups are added to a protein.
    GO:0046686    response to cadmium ion    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
    GO:0006511    ubiquitin-dependent protein catabolic process    The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
    GO:0016032    viral process    A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0009524    phragmoplast    Fibrous structure (light microscope view) that arises between the daughter nuclei at telophase and within which the initial partition (cell plate), dividing the mother cell in two (cytokinesis), is formed. Appears at first as a spindle connected to the two nuclei, but later spreads laterally in the form of a ring. Consists of microtubules.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0005819    spindle    The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.

Chain B,D,F,H,J,L,N,P   (COI1_ARATH | O04197)
molecular function
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0031146    SCF-dependent proteasomal ubiquitin-dependent protein catabolic process    The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.
    GO:0009901    anther dehiscence    The dehiscence of an anther to release the pollen grains contained within it.
    GO:0006952    defense response    Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
    GO:0042742    defense response to bacterium    Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
    GO:0050832    defense response to fungus    Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
    GO:0009861    jasmonic acid and ethylene-dependent systemic resistance    The jasmonic acid and ethylene (ethene) dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.
    GO:0009867    jasmonic acid mediated signaling pathway    A series of molecular signals mediated by jasmonic acid.
    GO:0031348    negative regulation of defense response    Any process that stops, prevents, or reduces the frequency, rate or extent of a defense response.
    GO:0016567    protein ubiquitination    The process in which one or more ubiquitin groups are added to a protein.
    GO:0009909    regulation of flower development    Any process that modulates the frequency, rate or extent of flower development.
    GO:0010218    response to far red light    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
    GO:0009625    response to insect    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.
    GO:0009753    response to jasmonic acid    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
    GO:0009611    response to wounding    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
    GO:0009641    shade avoidance    Shade avoidance is a set of responses that plants display when they are subjected to the shade of another plant. It often includes elongation, altered flowering time, increased apical dominance and altered partitioning of resources. Plants are able to distinguish between the shade of an inanimate object (e.g. a rock) and the shade of another plant due to the altered balance between red and far-red light in the shade of a plant; this balance between red and far-red light is perceived by phytochrome.
    GO:0010118    stomatal movement    The process of opening or closing of stomata, which is directly related to the stomatal conductance (measuring rate of passage of either water vapor or carbon dioxide (CO2) through stomata).

Chain Q,R,S,U,V,W,X   (TI10A_ARATH | Q9LMA8)
molecular function
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0003714    transcription corepressor activity    Interacting selectively and non-covalently with a repressing transcription factor and also with the basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription. Cofactors generally do not bind the template nucleic acid, but rather mediate protein-protein interactions between repressive transcription factors and the basal transcription machinery.
biological process
    GO:0006952    defense response    Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
    GO:0042742    defense response to bacterium    Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
    GO:0009908    flower development    The process whose specific outcome is the progression of the flower over time, from its formation to the mature structure. The flower is the reproductive structure in a plant, and its development begins with the transition of the vegetative or inflorescence meristem into a floral meristem.
    GO:0009867    jasmonic acid mediated signaling pathway    A series of molecular signals mediated by jasmonic acid.
    GO:1903507    negative regulation of nucleic acid-templated transcription    Any process that stops, prevents or reduces the frequency, rate or extent of nucleic acid-templated transcription.
    GO:0009555    pollen development    The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.
    GO:1900067    regulation of cellular response to alkaline pH    Any process that modulates the frequency, rate or extent of cellular response to alkalinity.
    GO:0031347    regulation of defense response    Any process that modulates the frequency, rate or extent of a defense response.
    GO:2000022    regulation of jasmonic acid mediated signaling pathway    Any process that modulates the frequency, rate or extent of jasmonic acid mediated signaling pathway.
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0009753    response to jasmonic acid    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
    GO:0009611    response to wounding    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
cellular component
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Chain Q,R,S,U,V,W,X   (Q3ED96_ARATH | Q3ED96)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        COI1_ARATH | O041973ogl 3ogm
        Q3ED96_ARATH | Q3ED963ogl 3ogm
        SKP1A_ARATH | Q392552p1m 2p1n 2p1o 2p1p 2p1q 3c6n 3c6o 3c6p 3ogl 3ogm 5hyw 5hzg
        TI10A_ARATH | Q9LMA83ogl 3ogm 4yz6

(-) Related Entries Specified in the PDB File

3ogl 3ogm