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(-) Description

Title :  CRYSTAL STRUCTURE OF ASPERGILLUS FUMIGATUS N-MYRISTOYL TRANSFERASE IN COMPLEX WITH MYRISTOYL COA AND A CAPPED PYRAZOLE SULPHONAMIDE LIGAND
 
Authors :  D. A. Robinson, S. Brand, N. R. Norcross, S. Thompson, J. R. Harrison, V. L. S. Torrie, S. P. Mcelroy, I. Hallyburton, S. Norval, L. Stojanovski F. R. C. Simeons, J. A. Frearson, R. Brenk, A. H. Fairlamb, M. A. J. Fergu P. G. Wyatt, I. H. Gilbert, K. D. Read
Date :  12 Aug 14  (Deposition) - 03 Dec 14  (Release) - 27 Jan 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Transferase, Drug Discovery (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Brand, N. R. Norcross, S. Thompson, J. R. Harrison, V. C. Smith, D. A. Robinson, L. S. Torrie, S. P. Mcelroy, I. Hallyburton, S. Norval, P. Scullion, L. Stojanovski, F. R. C. Simeons, D. Van Aalten, J. A. Frearson, R. Brenk, A. H. Fairlamb, M. A. J. Ferguson, P. G. Wyatt, I. H. Gilbert, K. D. Read
Lead Optimization Of A Pyrazole Sulfonamide Series Of Trypanosoma Brucei N-Myristoyltransferase Inhibitors: Identification And Evaluation Of Cns Penetrant Compounds As Potential Treatments For Stage 2 Human African Trypanosomiasis.
J. Med. Chem. V. 57 9855 2014
PubMed-ID: 25412409  |  Reference-DOI: 10.1021/JM500809C

(-) Compounds

Molecule 1 - GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE
    Chains: A
    EC Number: 2.3.1.97
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: PLYSS
    Expression System Vector: PGEX-6P1
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 86-492
    Organism Scientific: ASPERGILLUS FUMIGATUS
    Organism Taxid: 746128
    Synonym: MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, NMT, PEPTIDE N-MYRISTOYLTRANSFERASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
17L51Ligand/Ion2,6-DICHLORO-N-(DIFLUOROMETHYL)-4-[3-(PIPERIDIN-4-YL)PROPYL]-N-(1,3,5-TRIMETHYL-1H-PYRAZOL-4-YL)BENZENESULFONAMIDE
2MYA1Ligand/IonTETRADECANOYL-COA

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:148 , ASP A:150 , PHE A:155 , PHE A:157 , TYR A:159 , GLY A:251 , TYR A:263 , HIS A:265 , SER A:378 , TYR A:393 , GLY A:455 , LEU A:492 , HOH A:2089 , HOH A:2262 , HOH A:2263 , HOH A:2459 , HOH A:2460BINDING SITE FOR RESIDUE 7L5 A1493
2AC2SOFTWAREHIS A:146 , TYR A:147 , VAL A:148 , VAL A:210 , ILE A:212 , PHE A:214 , LEU A:215 , CYS A:216 , ILE A:217 , ARG A:222 , SER A:223 , LYS A:224 , ARG A:225 , LEU A:226 , THR A:227 , PRO A:228 , THR A:235 , ILE A:243 , TYR A:244 , GLN A:245 , ALA A:246 , TYR A:248 , THR A:249 , LEU A:254 , TYR A:462 , HOH A:2202 , HOH A:2209 , HOH A:2461 , HOH A:2462 , HOH A:2463 , HOH A:2464 , HOH A:2465 , HOH A:2466 , HOH A:2467 , HOH A:2468BINDING SITE FOR RESIDUE MYA A1494

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4UWJ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4UWJ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4UWJ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4UWJ)

(-) Exons   (0, 0)

(no "Exon" information available for 4UWJ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:392
                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee....hhhhh..........eeeee....hhhhhhhhhhhhhhhh.......eeee.hhhhhhhhhh....hhh.eeeeee.....eeeeeeeeeeeeee..eeeeeeeeeeeee.hhhh..hhhhhhhhhhhhhhhhh....eeeee........eeeeeeeee.hhhhhhhh.........hhhhhhhhh..........eee.hhhhhhhhhhhhhhhhh...eee..hhhhhhhhhh..........eeeeeee......eeeeeeeeeeeeee.......eeeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee...hhhhh......eeeeeeeeeeee.ee.....................ee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4uwj A 101 GGPIKIIDPEKVSKEPDALLEGFEWATLDLTNETELQELWDLLTYHYVEDDNAMFRFRYSQSFLHWALMSPGWKKEWHVGVRATKSRKLVASICGVPTEINVRNQKLKVVEINFLCIHKKLRSKRLTPVLIKEITRRCYLNGIYQAIYTAGVVLPTPVSSCRYYHRPLDWLKLYEVGFSPLPAGSTKARQITKNHLPSTTSTPGLRPMEPKDIDTVHDLLQRYLSRFALNQAFTREEVDHWLVHKPETVKEQVVWAYVVEDPETHKITDFFSFYNLESTVIQNPKHDNVRAAYLYYYATETAFTNNMKALKERLLMLMNDALILAKKAHFDVFNALTLHDNPLFLEQLKFGAGDGQLHFYLYNYRTAPVPGGVNEKNLPDEKRMGGVGIVML 492
                                   110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4UWJ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4UWJ)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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UniProtKB/Swiss-Prot
        NMT_ASPFU | Q9UVX3: 4cav 4caw 4cax 4qbj 4uwi

(-) Related Entries Specified in the PDB File

4uwi CRYSTAL STRUCTURE OF ASPERGILLUS FUMIGATUS N-MYRISTOYL TRANSFERASE IN COMPLEX WITH MYRISTOYL COA AND A PYRAZOLE SULPHONAMIDE LIGAND