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(-) Description

Title :  CRYSTAL STRUCTURE OF ASPERGILLUS FUMIGATUS N-MYRISTOYL TRANSFERASE IN COMPLEX WITH MYRISTOYL COA AND A PYRAZOLE SULPHONAMIDE LIGAND
 
Authors :  D. A. Robinson, S. Brand, N. R. Norcross, S. Thompson, J. R. Harrison, V. L. S. Torrie, S. P. Mcelroy, I. Hallyburton, S. Norval, L. Stojanovski F. R. C. Simeons, J. A. Frearson, R. Brenk, A. H. Fairlamb, M. A. J. Fergu P. G. Wyatt, I. H. Gilbert, K. D. Read
Date :  12 Aug 14  (Deposition) - 03 Dec 14  (Release) - 14 Jan 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A
Keywords :  Transferase, Drug Discovery (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Brand, N. R. Norcross, S. Thompson, J. R. Harrison, V. C. Smith, D. A. Robinson, L. S. Torrie, S. P. Mcelroy, I. Hallyburton, S. Norval, P. Scullion, L. Stojanovski, F. R. C. Simeons, D. Van Aalten, J. A. Frearson, R. Brenk, A. H. Fairlamb, M. A. J. Ferguson, P. G. Wyatt, I. H. Gilbert, K. D. Read
Lead Optimization Of A Pyrazole Sulfonamide Series Of Trypanosoma Brucei N-Myristoyltransferase Inhibitors: Identification And Evaluation Of Cns Penetrant Compounds As Potential Treatments For Stage 2 Human African Trypanosomiasis.
J. Med. Chem. V. 57 9855 2014
PubMed-ID: 25412409  |  Reference-DOI: 10.1021/JM500809C

(-) Compounds

Molecule 1 - GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE
    Chains: A
    EC Number: 2.3.1.97
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: PLYSS
    Expression System Vector: PGEX-6P1
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 86-492
    Organism Scientific: ASPERGILLUS FUMIGATUS
    Organism Taxid: 746128
    Synonym: MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, NMT, PEPTIDE N-MYRISTOYLTRANSFERASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1MYA1Ligand/IonTETRADECANOYL-COA
2XMQ1Ligand/Ion2,6-DICHLORO-4-[3-(4-METHYLPIPERAZIN-1-YL)PROPYL]-N-(1,3,5-TRIMETHYL-1H-PYRAZOL-4-YL)BENZENESULFONAMIDE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:148 , ASP A:150 , PHE A:155 , ARG A:156 , PHE A:157 , ASN A:213 , THR A:249 , TYR A:263 , HIS A:265 , SER A:378 , TYR A:393 , GLY A:455 , LEU A:492 , HOH A:2077 , HOH A:2206 , HOH A:2226 , HOH A:2329 , HOH A:2391BINDING SITE FOR RESIDUE XMQ A1493
2AC2SOFTWAREHIS A:146 , TYR A:147 , VAL A:148 , ASN A:213 , PHE A:214 , LEU A:215 , CYS A:216 , ILE A:217 , ARG A:222 , SER A:223 , LYS A:224 , ARG A:225 , LEU A:226 , THR A:227 , THR A:235 , CYS A:238 , TYR A:244 , TYR A:248 , THR A:249 , LEU A:254 , TYR A:462 , HOH A:2181 , HOH A:2184 , HOH A:2393 , HOH A:2394 , HOH A:2395 , HOH A:2396 , HOH A:2397 , HOH A:2398 , HOH A:2399BINDING SITE FOR RESIDUE MYA A1494

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4UWI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4UWI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4UWI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4UWI)

(-) Exons   (0, 0)

(no "Exon" information available for 4UWI)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:391
                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee....hhhhh..........eeeee....hhhhhhhhhhhhhhhh.......eeee.hhhhhhhhhh....hhh.eeeeee.....eeeeeeeeeeeeee..eeeeeeeeeeeee.hhhh..hhhhhhhhhhhhhhhhh....eeeee........eeeeeeeee.hhhhhhhh.........hhhhhhhhh..........eee.hhhhhhhhhhhhhhhhh...eee..hhhhhhhhhh.........eeeeeee......eeeeeeeeeeeeee.......eeeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee...hhhhh......eeeeeeeeeeee.ee.....................ee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4uwi A 101 GGPIKIIDPEKVSKEPDALLEGFEWATLDLTNETELQELWDLLTYHYVEDDNAMFRFRYSQSFLHWALMSPGWKKEWHVGVRATKSRKLVASICGVPTEINVRNQKLKVVEINFLCIHKKLRSKRLTPVLIKEITRRCYLNGIYQAIYTAGVVLPTPVSSCRYYHRPLDWLKLYEVGFSPLPAGSTKARQITKNHLPSTTSTPGLRPMEPKDIDTVHDLLQRYLSRFALNQAFTREEVDHWLVHKPEVKEQVVWAYVVEDPETHKITDFFSFYNLESTVIQNPKHDNVRAAYLYYYATETAFTNNMKALKERLLMLMNDALILAKKAHFDVFNALTLHDNPLFLEQLKFGAGDGQLHFYLYNYRTAPVPGGVNEKNLPDEKRMGGVGIVML 492
                                   110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340      |351       361       371       381       391       401       411       421       431       441       451       461       471       481       491 
                                                                                                                                                                                                                                                                                347|                                                                                                                                               
                                                                                                                                                                                                                                                                                 349
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4UWI)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4UWI)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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UniProtKB/Swiss-Prot
        NMT_ASPFU | Q9UVX3: 4cav 4caw 4cax 4qbj 4uwj

(-) Related Entries Specified in the PDB File

4uwj CRYSTAL STRUCTURE OF ASPERGILLUS FUMIGATUS N-MYRISTOYL TRANSFERASE IN COMPLEX WITH MYRISTOYL COA AND A CAPPED PYRAZOLE SULPHONAMIDE LIGAND