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(-) Description

Title :  CRYSTAL STRUCTURE OF VARIANT G186E FROM PSEUDOMONAS AERUGINOSA LIPOXYGENASE 2 AT 1.60A (C2)
 
Authors :  X. Carpena, A. Garreta, L. Herrero, I. Fita
Date :  30 Oct 14  (Deposition) - 04 Nov 15  (Release) - 04 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Non-Heme Iron Enzyme, Protein-Phospholipid Complex, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Carpena, A. Garreta, L. Herrero, I. Fita
Crystal Structure Of Lipoxygenase 2 In Space Group C2
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - LINOLEATE 9/13-LIPOXYGENASE
    Chains: A
    EC Number: 1.13.11.-, 1.13.11.58, 1.13.11.77
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: SECRETABLE PA_LOX WITHOUT THE PERIPLASMIC SIGNAL PEPTIDE (UNP RESIDUES 19-685)
    Gene: LOX
    Mutation: YES
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287
    Synonym: OLEATE 10S-LIPOXYGENASE, 15S-LIPOXYGENASE

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
18PE1Ligand/Ion(2R)-3-{[(S)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-2-(TETRADECANOYLOXY)PROPYL OCTADECANOATE
2FE21Ligand/IonFE (II) ION
Biological Unit 1 (2, 2)
No.NameCountTypeFull Name
18PE1Ligand/Ion(2R)-3-{[(S)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-2-(TETRADECANOYLOXY)PROPYL OCTADECANOATE
2FE21Ligand/IonFE (II) ION
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
18PE2Ligand/Ion(2R)-3-{[(S)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-2-(TETRADECANOYLOXY)PROPYL OCTADECANOATE
2FE22Ligand/IonFE (II) ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:377 , HIS A:382 , HIS A:555 , ASN A:559 , ILE A:685 , HOH A:824BINDING SITE FOR RESIDUE FE2 A 701
2AC2SOFTWARESER A:22 , ILE A:23 , GLU A:186 , GLU A:373 , HIS A:382 , PHE A:415 , ILE A:416 , ALA A:420 , ARG A:422 , ILE A:423 , LEU A:424 , ASN A:607 , TYR A:609 , ILE A:685 , HOH A:1236 , HOH A:1272BINDING SITE FOR RESIDUE 8PE A 702

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RPE)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Phe A:628 -Pro A:629

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RPE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RPE)

(-) Exons   (0, 0)

(no "Exon" information available for 4RPE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:658
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhh..hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh.ee..........ee...hhhhh.hhhhhhhhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhh.......hhhhhh.hhhhhhhhhhhh......ee..........hhhhhhhhhh...hhhhhhhh..eeeee.hhhhhhh....eee...eee.....eeeeee......eeeeeee.........eee.....hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhh..hhhhhhhhhhhhhhhh.....hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....................hhhhhhh...hhhhhhhhhhhhhhhh......................hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rpe A  22 SIFFSPLKYLGAEQQRSIDASRSLLDNLIPPSLPQYDNLAGKLARRAVLTSKKLVYVWTENFANVKGVPMARSVPLGELPNVDWLLKTAGVIVELIVNFVASLPASAAAQFERIAAGLSGDLEAARQVHEALLEEAKNDPAAAGSLLLRFTELQTRVIALLTRVELLVDDILKSASNLVTGLNRFRAVFGTLRLPEVADSFRDDEAFAYWRVAGPNPLLIRRVDALPANFPLGEEQFRRVMGADDSLLEAAASRRLYLLDYAELGKLAPSGAVDKLLTGTGFAYAPIALFALGKDRAGLLPVAIQCGQDPATHPMFVRPAESESDLYWGWQMAKTVVQVAEENYHEMFVHLAQTHLVSEAFCLATQRTLAPSHPLHVLLAPHFEGTLFINEGAARILLPSAGFIDVMFAAPIQDTQATAGGNRLGFDFYRGMLPESLKARNVDDPAALPDYPYRDDGLLVWNAIRQWAADYVAVYYASDGDVTADVELAAWVGEVIGSGKVAGFRPITGRSQLVEVLTMVIFTASAQHAAVNFPQPSMMTYAPAICAMSAAPAPDSPSGKSEADWLKMMPPTLVALEKVNIYHLLGSVYHGRLGDYRQTGFPYAPVFSDRRVTASGGPLERFQARLKEVEATIRTRNQARRKPYEYLLPSRIPASTNI 685
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201|      217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677        
                                                                                                                                                                                                             201|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
                                                                                                                                                                                                              208
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RPE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RPE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RPE)

(-) Gene Ontology  (7, 7)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        LOX_PSEAI | Q8RNT4: 4g32 4g33 5lc8

(-) Related Entries Specified in the PDB File

4g32 LIPOXYGENASE VARIANT WITH MUTATION G186E
4g33 LIPOXYGENASE VARIANT WITH MUTATION G186E