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(-) Description

Title :  LYTIC POLYSACCHARIDE MONOOXYGENASE 9F FROM NEUROSPORA CRASSA, NCLPMO9F
 
Authors :  T. C. Tan, R. Gandini, C. Sygmund, R. Kittl, D. Haltrich, R. Ludwig, B. M. C. Divne
Date :  30 May 14  (Deposition) - 15 Jul 15  (Release) - 15 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.10
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Beta-Sandwich, Cellulose Degradation, Electron Transfer, Cellulose, Cellobiose Dehydrogenase, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. C. Tan, R. Gandini, C. Sygmund, R. Kittl, D. Haltrich, R. Ludwig, B. M. Hallberg, C. Divne
Fungal Enzyme
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - LYTIC POLYSACCHARIDE MONOOXYGENASE
    Chains: A, B
    Engineered: YES
    Expression System: PICHIA PASTORIS
    Expression System Plasmid: PPICZALPHAA
    Expression System Strain: X33
    Expression System Taxid: 4922
    Expression System Vector Type: PLASMID
    Gene: B10C3.010, GH61-6, NCU03328
    Organism Scientific: NEUROSPORA CRASSA
    Organism Taxid: 5141
    Strain: OR74A

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric Unit (2, 3)
No.NameCountTypeFull Name
1CU2Ligand/IonCOPPER (II) ION
2NO31Ligand/IonNITRATE ION
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2NO31Ligand/IonNITRATE ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2NO3-1Ligand/IonNITRATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:1 , TYR A:71 , HIS A:72 , TYR A:157 , HOH A:452 , HOH A:689BINDING SITE FOR RESIDUE CU A 301
2AC2SOFTWAREHIS A:1 , GLY A:30 , PHE A:31 , HOH A:517 , HOH A:644 , HIS B:1 , GLY B:30 , PHE B:31 , HOH B:408BINDING SITE FOR RESIDUE NO3 A 302
3AC3SOFTWAREASP A:33 , HIS B:1 , TYR B:71 , HIS B:72 , TYR B:157BINDING SITE FOR RESIDUE CU B 301

(-) SS Bonds  (4, 4)

Asymmetric Unit
No.Residues
1A:42 -A:160
2A:130 -A:214
3B:42 -B:160
4B:130 -B:214

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Ala A:67 -Pro A:68
2Phe A:181 -Pro A:182
3Tyr A:198 -Pro A:199
4Ala B:67 -Pro B:68
5Phe B:181 -Pro B:182
6Tyr B:198 -Pro B:199

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QI8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QI8)

(-) Exons   (0, 0)

(no "Exon" information available for 4QI8)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee.............................hhhhhh..........eeee...eeeeeee........eeeeeee.....hhhhh......eeeeee...ee...ee.......eeeee.......eeeeeeeeeee..........eeeeeeeeeeee.......hhh.ee................................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qi8 A   1 HYTFPKVWANSGTTADWQYVRRADNWQNNGFVDNVNSQQIRCFQSTHSPAQSTLSVAAGTTITYGAAPSVYHPGPMQFYLARVPDGQDINSWTGEGAVWFKIYHEQPTFGSQLTWSSNGKSSFPVKIPSCIKSGSYLLRAEHIGLHVAQSSGAAQFYISCAQLSITGGGSTEPGANYKVSFPGAYKASDPGILININYPVPTSYKNPGPSVFTC 214
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210    


Chain B from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...........ee...............hhhhh............eeee...eeeeeee........eeeeeee................eeeeee...ee...ee.......eeeee.......eeeeeeeeeee..........eeeeeeeeeeee.......hhh.ee................................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qi8 B   1 HYTFPKVWANSGTTADWQYVRRADNWQNNGFVDNVNSQQIRCFQSTHSPAQSTLSVAAGTTITYGAAPSVYHPGPMQFYLARVPDGQDINSWTGEGAVWFKIYHEQPTFGSQLTWSSNGKSSFPVKIPSCIKSGSYLLRAEHIGLHVAQSSGAAQFYISCAQLSITGGGSTEPGANYKVSFPGAYKASDPGILININYPVPTSYKNPGPSVFTC 214
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QI8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QI8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QI8)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

4qi3 4qi4 4qi5 4qi6 4qi7