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(-) Description

Title :  CRYSTAL STRUCTURE OF P300 HISTONE ACETYLTRANSFERASE DOMAIN IN COMPLEX WITH AN INHIBITOR, ACETONYL-COENZYME A
 
Authors :  J. Maksimoska, R. Marmorstein
Date :  31 Mar 14  (Deposition) - 11 Jun 14  (Release) - 25 Jun 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A
Keywords :  Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Maksimoska, D. Segura-Pena, P. A. Cole, R. Marmorstein
Structure Of The P300 Histone Acetyltransferase Bound To Acetyl-Coenzyme A And Its Analogues.
Biochemistry V. 53 3415 2014
PubMed-ID: 24819397  |  Reference-DOI: 10.1021/BI500380F

(-) Compounds

Molecule 1 - HISTONE ACETYLTRANSFERASE P300
    Chains: A
    EC Number: 2.3.1.48
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Fragment: ACETYLTRANSFERASE DOMAIN (UNP RESIDUES 1287-1664)
    Gene: EP300, P300
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: P300 HAT, E1A-ASSOCIATED PROTEIN P300

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric/Biological Unit (2, 4)
No.NameCountTypeFull Name
1DMS3Ligand/IonDIMETHYL SULFOXIDE
2SOP1Ligand/Ion[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-2,2-DIMETHYL-4-OXO-4-{[3-OXO-3-({2-[(2-OXOPROPYL)THIO]ETHYL}AMINO)PROPYL]AMINO}BUTYLDIHYDROGEN DIPHOSPHATE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:1397 , LEU A:1398 , ASP A:1399 , SER A:1400 , ARG A:1410 , THR A:1411 , TYR A:1414 , TRP A:1436 , PRO A:1440 , TYR A:1446 , LYS A:1456 , ILE A:1457 , PRO A:1458 , ARG A:1462 , LEU A:1463 , TRP A:1466 , HOH A:1819 , HOH A:1836 , HOH A:1849 , HOH A:1855BINDING SITE FOR RESIDUE SOP A 1701
2AC2SOFTWAREHIS A:1434 , ILE A:1486 , ASP A:1507 , PHE A:1595 , PHE A:1596 , HOH A:1824BINDING SITE FOR RESIDUE DMS A 1702
3AC3SOFTWARETRP A:1436 , HIS A:1591 , VAL A:1594BINDING SITE FOR RESIDUE DMS A 1703
4AC4SOFTWARELYS A:1468 , ASP A:1485 , GLU A:1593 , PHE A:1595 , PHE A:1596BINDING SITE FOR RESIDUE DMS A 1704

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4PZT)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Pro A:1387 -Pro A:1388
2Arg A:1405 -Pro A:1406

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4PZT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4PZT)

(-) Exons   (0, 0)

(no "Exon" information available for 4PZT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:334
                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhh......eeeeeeeeeeeeee...hhhhhh........eeeeeeeeeeeeeee..eeeeeeeeeeeee..........eeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhh..eeeee......................hhhhhhhhhhhhhhhhhhh....eeeehhhhhhhh...hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..eeeee...........................hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4pzt A 1287 KFSAKRLPSTRLGTFLENRVNDFLRRQNHPESGEVTVRVVHASDKTVEVKPGMKARFVDSGEMAESFPYRTKALFAFEEIDGVDLCFFGMHVQEYGSDCPPPNQRRVYISYLDSVHFFRPKCLRTAVYHEILIGYLEYVKKLGYTTGHIWACPPSEGDDYIFHCHPPDQKIPKPKRLQEWFKKMLDKAVSERIVHDYKDIFKQATEDRLTSAKELPYFEGDFWPNVLEESIKELEQEEEERKREENTSDLSQKLYATMEKHKEVFFVIRLIAGPAANSLPPIVDPDPLIPCDLMDGRDAFLTLARDKHLEFSSLRRAQWSTMCMLVELHTQSQD 1664
                                  1296      1306      1316      1326      1336      1346      1356      1366      1376      1386      1396      1406      1416      1426      1436      1446      1456      1466      1476      1486      1496      1506      1516      1526      1580      1590      1600      1610      1620      1630      1640      1650      1660    
                                                                                                                                                                                                                                                                                1534|                                                                                     
                                                                                                                                                                                                                                                                                 1579
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PZT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PZT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PZT)

(-) Gene Ontology  (150, 150)

Asymmetric/Biological Unit(hide GO term definitions)

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  EP300_HUMAN | Q09472
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        EP300_HUMAN | Q09472: 1l3e 1p4q 2k8f 2mh0 2mzd 3biy 3i3j 3io2 3p57 3t92 4bhw 4pzr 4pzs 5bt3 5lkt 5lku 5lkx 5lkz

(-) Related Entries Specified in the PDB File

4pzr 4pzs