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(-) Description

Title :  CRYSTAL STRUCTURE OF SURFACTANT PROTEIN-D D325A/R343V MUTANT IN COMPLEX WITH TRIMANNOSE (MAN-A1,2MAN-A1,2MAN)
 
Authors :  B. C. Goh, M. J. Rynkiewicz, T. R. Cafarella, M. R. White, K. L. Hartshorn E. C. Crouch, O. Calin, P. H. Seeberger, K. Schulten, B. A. Seaton
Date :  02 Aug 13  (Deposition) - 04 Dec 13  (Release) - 11 Dec 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.20
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,C  (1x)
Biol. Unit 2:  D,E,F  (1x)
Biol. Unit 3:  G,H,I  (1x)
Biol. Unit 4:  J,K,L  (1x)
Keywords :  Surfactant Protein, Carbohydrate Recognition Domain, Lectin, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. C. Goh, M. J. Rynkiewicz, T. R. Cafarella, M. R. White, K. L. Hartshorn, K. Allen, E. C. Crouch, O. Calin, P. H. Seeberger, K. Schulten, B. A. Seaton
Molecular Mechanisms Of Inhibition Of Influenza By Surfactant Protein D Revealed By Large-Scale Molecular Dynamics Simulation.
Biochemistry V. 52 8527 2013
PubMed-ID: 24224757  |  Reference-DOI: 10.1021/BI4010683

(-) Compounds

Molecule 1 - PULMONARY SURFACTANT-ASSOCIATED PROTEIN D
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET30A(+)
    Expression System Strain: ROSETTA BLUE
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Fragment: NECK AND CARBOHYDRATE RECOGNITION DOMAIN (UNP RESIDUES 229- 375)
    Gene: COLEC7, PSPD, SFTP4, SFTPD
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: PSP-D, SP-D, COLLECTIN-7, LUNG SURFACTANT PROTEIN D

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): ABC         
Biological Unit 2 (1x):    DEF      
Biological Unit 3 (1x):       GHI   
Biological Unit 4 (1x):          JKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 72)

Asymmetric Unit (2, 72)
No.NameCountTypeFull Name
1CA38Ligand/IonCALCIUM ION
2MAN34Ligand/IonALPHA-D-MANNOSE
Biological Unit 1 (1, 8)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MAN8Ligand/IonALPHA-D-MANNOSE
Biological Unit 2 (1, 9)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MAN9Ligand/IonALPHA-D-MANNOSE
Biological Unit 3 (1, 9)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MAN9Ligand/IonALPHA-D-MANNOSE
Biological Unit 4 (1, 8)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MAN8Ligand/IonALPHA-D-MANNOSE

(-) Sites  (50, 50)

Asymmetric Unit (50, 50)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:321 , ASN A:323 , GLU A:329 , ASN A:341 , ASP A:342 , MAN A:406BINDING SITE FOR RESIDUE CA A 401
02AC2SOFTWAREASP A:297 , GLU A:301 , ASP A:324 , GLU A:329 , ASP A:330BINDING SITE FOR RESIDUE CA A 402
03AC3SOFTWAREGLU A:301 , ASP A:330BINDING SITE FOR RESIDUE CA A 403
04AC4SOFTWAREGLU A:232 , GLU B:232 , GLU C:232BINDING SITE FOR RESIDUE CA A 404
05AC5SOFTWAREGLU B:321 , ASN B:323 , GLU B:329 , ASN B:341 , ASP B:342 , MAN B:405BINDING SITE FOR RESIDUE CA B 401
06AC6SOFTWAREASP B:297 , GLU B:301 , ASP B:324 , GLU B:329 , ASP B:330BINDING SITE FOR RESIDUE CA B 402
07AC7SOFTWAREGLU B:301 , ASP B:330BINDING SITE FOR RESIDUE CA B 403
08AC8SOFTWAREGLU C:321 , ASN C:323 , GLU C:329 , ASN C:341 , ASP C:342 , MAN C:404BINDING SITE FOR RESIDUE CA C 401
09AC9SOFTWAREASP C:297 , GLU C:301 , ASP C:324 , GLU C:329 , ASP C:330BINDING SITE FOR RESIDUE CA C 402
10BC1SOFTWAREGLU C:301 , ASP C:330 , HOH C:501 , HOH C:502BINDING SITE FOR RESIDUE CA C 403
11BC2SOFTWAREGLU D:321 , ASN D:323 , GLU D:329 , ASN D:341 , ASP D:342 , MAN D:405BINDING SITE FOR RESIDUE CA D 401
12BC3SOFTWAREASP D:297 , GLU D:301 , ASP D:324 , GLU D:329 , ASP D:330BINDING SITE FOR RESIDUE CA D 402
13BC4SOFTWAREGLU D:301 , ASP D:330 , HOH D:501 , HOH D:502BINDING SITE FOR RESIDUE CA D 403
14BC5SOFTWAREGLU E:321 , ASN E:323 , GLU E:329 , ASN E:341 , ASP E:342 , MAN E:405BINDING SITE FOR RESIDUE CA E 401
15BC6SOFTWAREASP E:297 , GLU E:301 , ASP E:324 , GLU E:329 , ASP E:330BINDING SITE FOR RESIDUE CA E 402
16BC7SOFTWAREGLU E:301 , ASP E:330 , HOH E:501BINDING SITE FOR RESIDUE CA E 403
17BC8SOFTWAREGLU F:321 , ASN F:323 , GLU F:329 , ASN F:341 , ASP F:342 , MAN F:405BINDING SITE FOR RESIDUE CA F 401
18BC9SOFTWAREASP F:297 , GLU F:301 , ASP F:324 , GLU F:329 , ASP F:330BINDING SITE FOR RESIDUE CA F 402
19CC1SOFTWAREGLU F:301 , ASP F:330 , HOH F:501 , HOH F:502BINDING SITE FOR RESIDUE CA F 403
20CC2SOFTWAREGLU G:321 , ASN G:323 , GLU G:329 , ASN G:341 , ASP G:342 , MAN G:406BINDING SITE FOR RESIDUE CA G 401
21CC3SOFTWAREASP G:297 , GLU G:301 , ASP G:324 , GLU G:329 , ASP G:330BINDING SITE FOR RESIDUE CA G 402
22CC4SOFTWAREGLU G:301 , ASP G:330BINDING SITE FOR RESIDUE CA G 403
23CC5SOFTWAREGLU G:232 , GLU H:232 , GLU I:232BINDING SITE FOR RESIDUE CA G 404
24CC6SOFTWAREGLU H:321 , ASN H:323 , GLU H:329 , ASN H:341 , ASP H:342 , MAN H:405BINDING SITE FOR RESIDUE CA H 401
25CC7SOFTWAREASP H:297 , GLU H:301 , ASP H:324 , GLU H:329 , ASP H:330BINDING SITE FOR RESIDUE CA H 402
26CC8SOFTWAREGLU H:301 , ASP H:330 , HOH H:501 , HOH H:502BINDING SITE FOR RESIDUE CA H 403
27CC9SOFTWAREGLU I:321 , ASN I:323 , GLU I:329 , ASN I:341 , ASP I:342 , MAN I:405BINDING SITE FOR RESIDUE CA I 401
28DC1SOFTWAREASP I:297 , GLU I:301 , ASP I:324 , GLU I:329 , ASP I:330BINDING SITE FOR RESIDUE CA I 402
29DC2SOFTWAREGLU I:301 , ASP I:330 , HOH I:501 , HOH I:502BINDING SITE FOR RESIDUE CA I 403
30DC3SOFTWAREGLU J:321 , ASN J:323 , GLU J:329 , ASN J:341 , ASP J:342 , MAN J:404BINDING SITE FOR RESIDUE CA J 401
31DC4SOFTWAREASP J:297 , GLU J:301 , ASP J:324 , GLU J:329 , ASP J:330BINDING SITE FOR RESIDUE CA J 402
32DC5SOFTWAREGLU J:301 , ASP J:330BINDING SITE FOR RESIDUE CA J 403
33DC6SOFTWAREGLU K:321 , ASN K:323 , GLU K:329 , ASN K:341 , ASP K:342 , MAN K:405BINDING SITE FOR RESIDUE CA K 401
34DC7SOFTWAREASP K:297 , GLU K:301 , ASP K:324 , GLU K:329 , ASP K:330BINDING SITE FOR RESIDUE CA K 402
35DC8SOFTWAREGLU K:301 , ASP K:330BINDING SITE FOR RESIDUE CA K 403
36DC9SOFTWAREGLU L:321 , ASN L:323 , GLU L:329 , ASN L:341 , ASP L:342 , MAN L:405BINDING SITE FOR RESIDUE CA L 401
37EC1SOFTWAREASP L:297 , GLU L:301 , ASP L:324 , GLU L:329 , ASP L:330BINDING SITE FOR RESIDUE CA L 402
38EC2SOFTWAREGLU L:301 , ASP L:330 , HOH L:501 , HOH L:502BINDING SITE FOR RESIDUE CA L 403
39EC3SOFTWAREGLU A:321 , ASN A:323 , GLU A:329 , GLU A:333 , ASN A:341 , ASP A:342 , ARG A:349 , CA A:401 , THR E:308 , GLY E:309BINDING SITE FOR CHAIN A OF POLYSACCHARIDE RESIDUES 405 TO 407
40EC4SOFTWAREGLU B:321 , ASN B:323 , GLY B:326 , GLU B:329 , GLU B:333 , ASN B:341 , ASP B:342 , VAL B:343 , ARG B:349 , CA B:401 , THR K:308 , GLY K:309BINDING SITE FOR CHAIN B OF POLYSACCHARIDE RESIDUES 404 TO 406
41EC5SOFTWAREGLU C:321 , ASN C:323 , GLU C:329 , GLU C:333 , ASN C:341 , ASP C:342 , ARG C:349 , CA C:401BINDING SITE FOR CHAIN C OF POLYSACCHARIDE RESIDUES 404 TO 405
42EC6SOFTWARETHR B:308 , GLU D:321 , ASN D:323 , GLU D:329 , GLU D:333 , ASN D:341 , ASP D:342 , VAL D:343 , ARG D:349 , CA D:401BINDING SITE FOR CHAIN D OF POLYSACCHARIDE RESIDUES 404 TO 406
43EC7SOFTWAREGLU E:321 , ASN E:323 , ALA E:325 , GLU E:329 , GLU E:333 , ASN E:341 , ASP E:342 , VAL E:343 , ARG E:349 , CA E:401 , THR L:308 , GLY L:309BINDING SITE FOR CHAIN E OF POLYSACCHARIDE RESIDUES 404 TO 406
44EC8SOFTWAREGLU F:321 , ASN F:323 , GLU F:329 , GLU F:333 , ASN F:341 , ASP F:342 , VAL F:343 , ARG F:349 , CA F:401 , THR H:308 , GLY H:309BINDING SITE FOR CHAIN F OF POLYSACCHARIDE RESIDUES 404 TO 406
45EC9SOFTWARETHR D:308 , GLY D:309 , GLU G:321 , ASN G:323 , ALA G:325 , GLY G:326 , GLU G:329 , GLU G:333 , ASN G:341 , ASP G:342 , VAL G:343 , ARG G:349 , CA G:401BINDING SITE FOR CHAIN G OF POLYSACCHARIDE RESIDUES 405 TO 407
46FC1SOFTWAREGLU H:321 , ASN H:323 , ALA H:325 , GLU H:329 , GLU H:333 , PHE H:335 , ASN H:341 , ASP H:342 , VAL H:343 , ARG H:349 , CA H:401BINDING SITE FOR CHAIN H OF POLYSACCHARIDE RESIDUES 404 TO 406
47FC2SOFTWARETHR A:308 , GLU I:321 , ASN I:323 , GLU I:329 , GLU I:333 , PHE I:335 , ASN I:341 , ASP I:342 , ARG I:349 , CA I:401BINDING SITE FOR CHAIN I OF POLYSACCHARIDE RESIDUES 404 TO 406
48FC3SOFTWARETHR C:308 , GLY C:309 , GLU J:321 , ASN J:323 , GLU J:329 , GLU J:333 , ASN J:341 , ASP J:342 , VAL J:343 , ARG J:349 , CA J:401BINDING SITE FOR CHAIN J OF POLYSACCHARIDE RESIDUES 404 TO 405
49FC4SOFTWARETHR F:308 , GLY F:309 , GLU K:321 , ASN K:323 , ALA K:325 , GLY K:326 , GLU K:329 , GLU K:333 , ASN K:341 , ASP K:342 , VAL K:343 , ARG K:349 , CA K:401BINDING SITE FOR CHAIN K OF POLYSACCHARIDE RESIDUES 404 TO 406
50FC5SOFTWARETHR I:308 , GLY I:309 , GLU L:321 , ASN L:323 , GLU L:329 , GLU L:333 , ASN L:341 , ASP L:342 , VAL L:343 , ARG L:349 , CA L:401BINDING SITE FOR CHAIN L OF POLYSACCHARIDE RESIDUES 404 TO 406

(-) SS Bonds  (24, 24)

Asymmetric Unit
No.Residues
1A:261 -A:353
2A:331 -A:345
3B:261 -B:353
4B:331 -B:345
5C:261 -C:353
6C:331 -C:345
7D:261 -D:353
8D:331 -D:345
9E:261 -E:353
10E:331 -E:345
11F:261 -F:353
12F:331 -F:345
13G:261 -G:353
14G:331 -G:345
15H:261 -H:353
16H:331 -H:345
17I:261 -I:353
18I:331 -I:345
19J:261 -J:353
20J:331 -J:345
21K:261 -K:353
22K:331 -K:345
23L:261 -L:353
24L:331 -L:345

(-) Cis Peptide Bonds  (24, 24)

Asymmetric Unit
No.Residues
1Phe A:234 -Pro A:235
2Glu A:321 -Pro A:322
3Phe B:234 -Pro B:235
4Glu B:321 -Pro B:322
5Phe C:234 -Pro C:235
6Glu C:321 -Pro C:322
7Phe D:234 -Pro D:235
8Glu D:321 -Pro D:322
9Phe E:234 -Pro E:235
10Glu E:321 -Pro E:322
11Phe F:234 -Pro F:235
12Glu F:321 -Pro F:322
13Phe G:234 -Pro G:235
14Glu G:321 -Pro G:322
15Phe H:234 -Pro H:235
16Glu H:321 -Pro H:322
17Phe I:234 -Pro I:235
18Glu I:321 -Pro I:322
19Phe J:234 -Pro J:235
20Glu J:321 -Pro J:322
21Phe K:234 -Pro K:235
22Glu K:321 -Pro K:322
23Phe L:234 -Pro L:235
24Glu L:321 -Pro L:322

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4M18)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4M18)

(-) Exons   (0, 0)

(no "Exon" information available for 4M18)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 A 214 LQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   223       233       243       253       263       273       283       293       303       313       323       333       343       353  


Chain B from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 B 214 LQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   223       233       243       253       263       273       283       293       303       313       323       333       343       353  


Chain C from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4m18 C 212 EALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   221       231       241       251       261       271       281       291       301       311       321       331       341       351    


Chain D from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 D 211 VEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   220       230       240       250       260       270       280       290       300       310       320       330       340       350     


Chain E from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 E 211 VEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   220       230       240       250       260       270       280       290       300       310       320       330       340       350     


Chain F from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 F 211 VEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   220       230       240       250       260       270       280       290       300       310       320       330       340       350     


Chain G from PDB  Type:PROTEIN  Length:143
                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 G 213 ALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   222       232       242       252       262       272       282       292       302       312       322       332       342       352   


Chain H from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 H 211 VEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   220       230       240       250       260       270       280       290       300       310       320       330       340       350     


Chain I from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 I 214 LQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   223       233       243       253       263       273       283       293       303       313       323       333       343       353  


Chain J from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 J 214 LQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   223       233       243       253       263       273       283       293       303       313       323       333       343       353  


Chain K from PDB  Type:PROTEIN  Length:143
                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 K 213 ALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   222       232       242       252       262       272       282       292       302       312       322       332       342       352   


Chain L from PDB  Type:PROTEIN  Length:143
                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhh...eeee..eeeeeeeeeehhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhh..eeeeee...........................hhhhh..eeee.....eeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m18 L 213 ALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDAGGSEDCVEIFTNGKWNDVACGEKRLVVCEF 355
                                   222       232       242       252       262       272       282       292       302       312       322       332       342       352
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

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(-) Gene Ontology  (27, 27)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SFTPD_HUMAN | P35247: 1b08 1m7l 1pw9 1pwb 2ggu 2ggx 2orj 2ork 2os9 2ria 2rib 2ric 2rid 2rie 3dbz 3g81 3g83 3g84 3ikn 3ikp 3ikq 3ikr 4e52 4m17

(-) Related Entries Specified in the PDB File

4m17 UNLIGANDED SURFACTANT PROTEIN-D D325A/R343V MUTANT