Chain A from PDB Type:PROTEIN Length:250
SCOP domains d4lqia_ A: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .................hhhhhhhhhhhhhh..eeeeee..eeeeeee........hhhhh...eeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeeee...eeeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh........eeeeee...hhhhh.ee.........eee.hhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi A 4 MTDRYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELEDAIHIALLTLKESVEGEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRFRKLTSQEINDRLEAL 236
13 23 33 43 53 63 73 83 93 102A 112 122 132 142 | 151 161 171 181 191 202 211 217E||||||217O| 226 236
102A 147A 200| 209A 217A|||||217K|||||
202 217B|||||217L||||
217D|||||217M|||
217E|||||217N||
217F|||| 217O|
217G||| 217P
217H||
217I|
217J
Chain B from PDB Type:PROTEIN Length:244
SCOP domains d4lqib_ B: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhh...........hhhhhhhhhhhh....eeeee...eeeeeee................eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.......eeeeeeeee...eeeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh.....hhh.eeeeeee........eeee.hhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi B 4 GSRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDILVKTGIT 239
13 23 33 43 53 63| 72 82 92 102 112 122 132 142 | 151 161 171 181 191 202 || 210 |218|| | 225 235
63A 144A 200| || 216A| || |
202 || 216B || |
204A| 218C| |
204B 218D |
219E
Chain C from PDB Type:PROTEIN Length:241
SCOP domains d4lqic_ C: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............hhhhhhhhhhhhh...eeeee....eeeeee.................eeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeee........eeeee.....eee..eeee..hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh.....eeeeeee...eeee.hhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi C 7 GYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYVTQIEQEKQEQ 243
16 26 36 46 56 | 65 75 85 95 105 115 125 135 144| 153 163 173 180C|| 190 200 || 212 222 232 242
62A 143A | 180A|||| 203|
144B 180B||| 206
180C||
180D|
182
Chain D from PDB Type:PROTEIN Length:242
SCOP domains d4lqid_ D: Proteasome beta subunit (catalytic) SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............hhhhhhhhhhhhh...eeeeee..eeeeeee........hhhhh..eeeee..eeeeeee.hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh..................eeeeeeeee...eeeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh........eeeeeee...eeee.hhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi D 9 DRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQVMEEKLDENNAQLSCITKQDGFKIYDNEKTAELIKELKEKEAAE 244
18 28 38 48 58 68 78 88 98 108 118 |123E||| 132 142 | 151 161 171 180C||| 191 201|| |211 221 231 || 242
123A||||||| 144A 180C||| 202| 209A| 233|
123B|||||| 180D|| 205 209B 235
123C||||| 180E|
123D|||| 184
123E|||
123F||
123G|
125
Chain E from PDB Type:PROTEIN Length:233
SCOP domains d4lqie_ E: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhh............hhhhhhhhhhhhh...eeeee...eeeeeee.............eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh........eeeeeeeee..eeeeeeee...eeee..eeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh.........eeeeeee..eeeeeeehhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi E 4 FRNNYDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADELSSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVAKYI 233
13 23 33 43 53 ||65 75 85 95 105 115 125 135 145 155 165 175 |180E|| 191 201 || ||210 220 230
60| 180A|||||| 204| |||||
63 180B||||| 206 |||||
180C|||| 207B||||
180D||| 207C|||
180E|| 207D||
180F| 207E|
183 210
Chain F from PDB Type:PROTEIN Length:244
SCOP domains d4lqif_ F: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ................hhhhhhhhhhhhh...eeeeee..eeeeeeeee..............eee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeeee..eeeeeee.....eee..eeee..hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh....eeeeeeeee........ee.hhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi F 5 GTGYDLSNSVFSPDGRNFQVEYAVKAVENGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKIIYLAHEDNKEKDFELEISWCSLSETNGLHKFVKGDLLQEAIDFAQKEIN 241
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 180D||| 191 202 || 210 218B| 227 237
180A|||||| 199| 206B| 218A||
180B||||| 201 206C 218B|
180C|||| 218C
180D|||
180E||
180F|
184
Chain G from PDB Type:PROTEIN Length:243
SCOP domains d4lqig_ G: Proteasome beta subunit (catalytic) SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhh.........hhhhhhhhhhh......eeeee...eeeeeee........hhhhh..eee.....eeeee.hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh........eeeeeeee...eeeeeee.....eee..eeee..hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.......eeeeeee..eeee.hhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi G 6 AGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDKFFTLSAENIEERLVAIAEQD 240
15 25 34A 44 54 64 74 84 94 104 114 124 134 143A 153 163 173 179D|||||||186 196 206 216 || 227 237
34A 143A 179A||||||184|||| 218|
179B|||||184G||| 220
179C|||||184H||
179D|||||184M|
179E|||| 186
180A|||
180B||
180C|
180D
Chain H from PDB Type:PROTEIN Length:222
SCOP domains d4lqih_ H: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.....eeeeeeeee..eeeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh......eeeeeee....eeeeeeee....................eeeeeee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
4lqi H 1 TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVREEKQKSYKFPRGTTAVLKESIVNICD 223
10 20 30 40 50 60 70 80 90|| 101 | 110 120 130 140 150 160 170 180 |191 201 211 221
91| 105A 187|
93 189
Chain I from PDB Type:PROTEIN Length:204
SCOP domains d4lqii_ I: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhh...eeeeee...eeeeeee..eee..eeee.....eeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.......eeeeeeee......eeeeee.....ee....eeeee.hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh........eeeeeee...eeeeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
4lqi I -8 SDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 194
||2 12 22 32 || 43 53 63 73 83 93 103 ||| 110 120 | 129 139 149 159 169 179| 190
-1| 36| 105A|| 122A 179|
1 38 105B| 181
105C
Chain J from PDB Type:PROTEIN Length:198
SCOP domains d4lqij_ J: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...eeeee...eeeeeee..eee..eeee.....eeeee..eeeeeee..hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.......eeeeeeeee....eeeeeee.....eee..eeee.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh......eeeeeee..eeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
4lqi J -1 MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQVDDFQAQ 193
|| 9 19 29 39 49 59 69 79 89 || 97 105B| 114 124 134 144 154 164 174 |185
-1| 90A| 105A|| 181|
1 90B 105B| 183
105C
Chain K from PDB Type:PROTEIN Length:212
SCOP domains d4lqik_ K: Proteasome beta subunit (catalytic) SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeee.eehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh......eeeeeeeee...eeeeeeee....eeee.eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeeeehhhhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi K 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFWKVKEEEGSFNNVIG 211
10 20 30 40 50 60 70 80 90 100 ||108 118 128 138 148 158 168 178 || 189 199 209
105A| 181|
105B 183
Chain L from PDB Type:PROTEIN Length:222
SCOP domains d4lqil_ L: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..........eeeeee....eeeeee..eee..eeee......ee.....eeeeeehhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.......eeeeeeee.....eeeeee.....eeee.eeeee.hhhhhhhhhhhhh.....................hhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
4lqi L -9 QFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 212
0 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain M from PDB Type:PROTEIN Length:233
SCOP domains d4lqim_ M: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee..eeeee...eeeeeee..eee..eeee.....eeee...eeeeeeeehhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhh.....eeeeeeee.....eeeeeee....eee..eee.hhhhhhhhhhhh....hhhhh...hhhhhhhhhhhhhhhhhhhh.....eeeeeeee...eeeeeeeee.....hhhhhhh........ Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi M -8 TQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRNFSLAIIDKNTGLTFKKNLQVENMKWDFAKDIKGYGTQKI 211
||2 12 22 32 42 52 62 70C | |||| 77 87 || 95 105|| 113 123 133 141B|||||| 148 158 168 178 || 188 198 208
-1| 70A| | |||| 92A| 105A| 141A||||||| 181A|
1 70C | |||| 92B 105B 141B|||||| 183
71A |||| 141C|||||
72B||| 141D||||
72C|| 141E|||
72D| 141F||
74 141G|
144
Chain N from PDB Type:PROTEIN Length:196
SCOP domains d4lqin_ N: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.....eeeeeeeee...eeeeeee......eee.eeeehhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh......eeeeeee..eeeeeeehhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi N 1 TSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFYPDEYEQL 187J
10 20 30 40 50 60 70| 81 91|| 102 || 110 120 130 140 150 160 170 180|| 187D||||||
70| 92| 105A| 181| 187A|||||187J
72 94 105B 183 187B|||||||
187C||||||
187D|||||
187E||||
187F|||
187G||
187H|
187I
Chain O from PDB Type:PROTEIN Length:250
SCOP domains d4lqio_ O: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .................hhhhhhhhhhhhhh..eeeeee..eeeeeee.......eehhhh...eeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeeee...eeeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh........eeeeee...hhhhh.ee.........eee.hhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi O 4 MTDRYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELEDAIHIALLTLKESVEGEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRFRKLTSQEINDRLEAL 236
13 23 33 43 53 63 73 83 93 102A 112 122 132 142 | 151 161 171 181 191 202 211 217E||||||217O| 226 236
102A 147A 200| 209A 217A|||||217K|||||
202 217B|||||217L||||
217D|||||217M|||
217E|||||217N||
217F|||| 217O|
217G||| 217P
217H||
217I|
217J
Chain P from PDB Type:PROTEIN Length:244
SCOP domains d4lqip_ P: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhh...........hhhhhhhhhhhh....eeeee...eeeeeee................eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.......eeeeeeeee...eeeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh.....hhh.eeeeeee........eeee.hhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi P 4 GSRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDILVKTGIT 239
13 23 33 43 53 63| 72 82 92 102 112 122 132 142 | 151 161 171 181 191 202 || 210 |218|| | 225 235
63A 144A 200| || 216A| || |
202 || 216B || |
204A| 218C| |
204B 218D |
219E
Chain Q from PDB Type:PROTEIN Length:241
SCOP domains d4lqiq_ Q: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............hhhhhhhhhhhhh...eeeee....eeeeee.................eeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeee........eeeee.....eee..eeee..hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh.....eeeeeee...eeee.hhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi Q 7 GYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYVTQIEQEKQEQ 243
16 26 36 46 56 | 65 75 85 95 105 115 125 135 144| 153 163 173 180C|| 190 200 || 212 222 232 242
62A 143A | 180A|||| 203|
144B 180B||| 206
180C||
180D|
182
Chain R from PDB Type:PROTEIN Length:242
SCOP domains d4lqir_ R: Proteasome beta subunit (catalytic) SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............hhhhhhhhhhhhh...eeeeee..eeeeeee........hhhhh..eeeee..eeeeeee.hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh..................eeeeeeeee...eeeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh........eeeeeee...eeee.hhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi R 9 DRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQVMEEKLDENNAQLSCITKQDGFKIYDNEKTAELIKELKEKEAAE 244
18 28 38 48 58 68 78 88 98 108 118 |123E||| 132 142 | 151 161 171 180C||| 191 201|| |211 221 231 || 242
123A||||||| 144A 180C||| 202| 209A| 233|
123B|||||| 180D|| 205 209B 235
123C||||| 180E|
123D|||| 184
123E|||
123F||
123G|
125
Chain S from PDB Type:PROTEIN Length:233
SCOP domains d4lqis_ S: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhh............hhhhhhhhhhhhh...eeeee...eeeeeee.............eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh........eeeeeeeee..eeeeeeee...eeee..eeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh.........eeeeeee..eeeeeeehhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi S 4 FRNNYDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADELSSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVAKYI 233
13 23 33 43 53 ||65 75 85 95 105 115 125 135 145 155 165 175 |180E|| 191 201 || ||210 220 230
60| 180A|||||| 204| |||||
63 180B||||| 206 |||||
180C|||| 207B||||
180D||| 207C|||
180E|| 207D||
180F| 207E|
183 210
Chain T from PDB Type:PROTEIN Length:244
SCOP domains d4lqit_ T: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ................hhhhhhhhhhhhh...eeeee...eeeeeeeee..............eee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeeee..eeeeeee.....eee..eeee..hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh....eeeeeeeee........ee.hhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi T 5 GTGYDLSNSVFSPDGRNFQVEYAVKAVENGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKIIYLAHEDNKEKDFELEISWCSLSETNGLHKFVKGDLLQEAIDFAQKEIN 241
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 180D||| 191 202 || 210 218B| 227 237
180A|||||| 199| 206B| 218A||
180B||||| 201 206C 218B|
180C|||| 218C
180D|||
180E||
180F|
184
Chain U from PDB Type:PROTEIN Length:243
SCOP domains d4lqiu_ U: Proteasome beta subunit (catalytic) SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhh.........hhhhhhhhhhh......eeeee...eeeeeee........hhhhh..eee.....eeeee.hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh........eeeeeeee...eeeeeee.....eeee.eeee..hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.......eeeeeee..eeee.hhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi U 6 AGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDKFFTLSAENIEERLVAIAEQD 240
15 25 34A 44 54 64 74 84 94 104 114 124 134 143A 153 163 173 179D|||||||186 196 206 216 || 227 237
34A 143A 179A||||||184|||| 218|
179B|||||184G||| 220
179C|||||184H||
179D|||||184M|
179E|||| 186
180A|||
180B||
180C|
180D
Chain V from PDB Type:PROTEIN Length:222
SCOP domains d4lqiv_ V: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeeeee..eeeeeee..eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.....eeeeeeeee..eeeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh......eeeeeee....eeeeeeee....................eeeeeee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
4lqi V 1 TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVREEKQKSYKFPRGTTAVLKESIVNICD 223
10 20 30 40 50 60 70 80 90|| 101 | 110 120 130 140 150 160 170 180 |191 201 211 221
91| 105A 187|
93 189
Chain W from PDB Type:PROTEIN Length:204
SCOP domains d4lqiw_ W: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhh...eeeeee...eeeeeee..eee..eeee.....eeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.......eeeeeeee......eeeeee.....ee....eeeee.hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh........eeeeeee...eeeeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
4lqi W -8 SDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 194
||2 12 22 32 || 43 53 63 73 83 93 103 ||| 110 120 | 129 139 149 159 169 179| 190
-1| 36| 105A|| 122A 179|
1 38 105B| 181
105C
Chain X from PDB Type:PROTEIN Length:198
SCOP domains d4lqix_ X: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...eeeee...eeeeeee..eee..eeee.....eeeee..eeeeeee..hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.......eeeeeeeee....eeeeeee.....eee..eeee.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh......eeeeeee..eeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
4lqi X -1 MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQVDDFQAQ 193
|| 9 19 29 39 49 59 69 79 89 || 97 105B| 114 124 134 144 154 164 174 |185
-1| 90A| 105A|| 181|
1 90B 105B| 183
105C
Chain Y from PDB Type:PROTEIN Length:212
SCOP domains d4lqiy_ Y: Proteasome beta subunit (catalytic) SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeee.eehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh......eeeeeeeee...eeeeeeee....eeee.eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeeeehhhhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi Y 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFWKVKEEEGSFNNVIG 211
10 20 30 40 50 60 70 80 90 100 ||108 118 128 138 148 158 168 178 || 189 199 209
105A| 181|
105B 183
Chain Z from PDB Type:PROTEIN Length:222
SCOP domains d4lqiz_ Z: Proteasome beta subunit (catalytic) SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..........eeeeee....eeeeee..eee..eeee......ee.....eeeeeehhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.......eeeeeeee.....eeeeee.....eeee.eeeee.hhhhhhhhhhhhh.....................hhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
4lqi Z -9 QFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 212
0 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain a from PDB Type:PROTEIN Length:233
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee..eeeee...eeeeeee..eee..eeee.....eeee...eeeeeeeehhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhh.....eeeeeeee.....eeeeeee....eee..eee.hhhhhhhhhhhh....hhhhh...hhhhhhhhhhhhhhhhhhhh.....eeeeeeee...eeeeeeeee.....hhhhhhh........ Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi a -8 TQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRNFSLAIIDKNTGLTFKKNLQVENMKWDFAKDIKGYGTQKI 211
||2 12 22 32 42 52 62 70C|| |||| 77 87 || 95 105|| 113 123 133 141B|||||| 148 158 168 178 || 188 198 208
-1| 70A||| |||| 92A| 105A| 141A||||||| 181A|
1 70C|| |||| 92B 105B 141B|||||| 183
70D| |||| 141C|||||
71A |||| 141D||||
72B||| 141E|||
72C|| 141F||
72D| 141G|
74 144
Chain b from PDB Type:PROTEIN Length:196
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.....eeeeeeeee...eeeeeee......eee.eeeehhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh......eeeeeee..eeeeeeehhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4lqi b 1 TSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFYPDEYEQL 187J
10 20 30 40 50 60 70| 81 91|| 102 || 110 120 130 140 150 160 170 180|| 187D||||||
70| 92| 105A| 181| 187A|||||187J
72 94 105B 183 187B|||||||
187C||||||
187D|||||
187E||||
187F|||
187G||
187H|
187I
| Legend: |
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→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
Description
