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(-) Description

Title :  CRYSTAL STRUCTURE OF H191L MUTANT OF UDP-GLUCOSE PYROPHOSPHORYLASE FROM LEISHMANIA MAJOR
 
Authors :  J. I. Fuehring, F. H. Routier, A. -C. Lamerz, P. Baruch, R. Gerardy-Scha R. Fedorov
Date :  01 Feb 13  (Deposition) - 29 Jan 14  (Release) - 12 Mar 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.35
Chains :  Asym./Biol. Unit :  A
Keywords :  Rossmann-Like Alpha/Beta/Alpha Sandwich Fold Of Catalytic Domain, Nucleotidyltransferase, Utp, Glc-1-P, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. I. Fuehring, F. H. Routier, A. -C. Lamerz, P. Baruch, R. Gerardy-Schahn, R. Fedorov
Catalytic Mechanism And Allosteric Regulation Of Udp-Glucos Pyrophosphorylase From Leishmania Major
Acs Catalysis V. 3 2976 2013
PubMed: search  |  Reference-DOI: 10.1021/CS4007777

(-) Compounds

Molecule 1 - UDP-GLUCOSE PYROPHOSPHORYLASE
    Chains: A
    EC Number: 2.7.7.9
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: UGP, LMJF_18_0990
    Mutation: YES
    Organism Scientific: LEISHMANIA MAJOR
    Organism Taxid: 5664

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4J18)

(-) Sites  (0, 0)

(no "Site" information available for 4J18)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4J18)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Lys A:6 -Ser A:7
2Gly A:268 -Lys A:269

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4J18)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4J18)

(-) Exons   (0, 0)

(no "Exon" information available for 4J18)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:485
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh......hhhhh......ee.hhh....hhhhhh.eeeeee...eehhhheeee....eee..eehhhhhhhhhhhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhh.....eee...ee.ee...........hhhh.ee....hhhhhhhhhhhhhhhhhhh...eeeeee........hhhhhhhhhhhh..eeeeeee.hhhhh...eeeeeeeee........eeeeeeeeehhhhhhhhhhhhhh......eeeeeeeeeehhhhhhhhhh.........eeeeee.........eeeeee.hhhhhhhhh..eeeee.hhhhh....hhhhhhhhhh..eee.....eee.hhhh....eeee......hhhhhhhhh.........eeeeeee..ee.....eeeeeeeee.......ee.....eee..ee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4j18 A   4 DMKSLSAAAQACVKKMRDAKVNEACIRTFIAQHVMVSKGETGSIPDSAIMPVDSLDALDSLTIECDNAVLQSTVVLKLNGGLGTGMGLCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPWLYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGLGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDKRVLAYMEKEKIDFLMEVCRRTESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESFQDINKYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMFESASAIVVPRSRFAPVKTCADLLALRSDAYVVTDDFRLVLDDRCHGHPPVVDLDSAHYKMMNGFEKLVQHGVPSLVECKRVTVKGLVQFGAGNVLTGTVTIENTDSASAFVIPDGAKLNDTTASP 488
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4J18)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4J18)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4J18)

(-) Gene Ontology  (7, 7)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Gly A:268 - Lys A:269   [ RasMol ]  
    Lys A:6 - Ser A:7   [ RasMol ]  
 

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  4j18
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q4QDU3_LEIMA | Q4QDU3: 2oef 2oeg 4m28 4m2a 4m2b

(-) Related Entries Specified in the PDB File

2oef L. MAJOR UGP APO-FORM STRUCTURE (OPEN STATE).
2oeg L. MAJOR UGP IN COMPLEX WITH UDP-GLC (CLOSED STATE).
4euj POST-REACTIVE (CLOSED) STATE OF L. MAJOR UGP.
4evk L. MAJOR UGP L281D MUTANT STRUCTURE IN COMPLEX WITH UDP-GLC.