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(-) Description

Title :  STRUCTURE OF MNTR E11K MUTANT COMPLEXED WITH CD2+
 
Authors :  A. Glasfeld, B. J. Cuthbert
Date :  09 Nov 12  (Deposition) - 21 Nov 12  (Release) - 06 Feb 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Winged Helix-Turn-Helix, Transcription Regulator, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. M. Mcguire, B. J. Cuthbert, Z. Ma, K. D. Grauer-Gray, M. Brunjes Brophy, K. A. Spear, S. Soonsanga, J. I. Kliegman, S. L. Griner, J. D. Helmann, A. Glasfeld
Roles Of The A And C Sites In The Manganese-Specific Activation Of Mntr.
Biochemistry V. 52 701 2013
PubMed-ID: 23298157  |  Reference-DOI: 10.1021/BI301550T

(-) Compounds

Molecule 1 - TRANSCRIPTIONAL REGULATOR MNTR
    Chains: A, B
    Engineered: YES
    Gene: MNTR, YQHN, BSU24520
    Mutation: YES
    Organism Scientific: BACILLUS SUBTILIS SUBSP. SUBTILIS
    Organism Taxid: 224308
    Strain: 168
    Synonym: MANGANESE TRANSPORT REGULATOR

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1CD2Ligand/IonCADMIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:8 , GLU A:99 , GLU A:102 , HIS A:103 , HOH A:315BINDING SITE FOR RESIDUE CD A 201
2AC2SOFTWAREASP B:8 , GLU B:99 , GLU B:102 , HIS B:103 , HOH B:330BINDING SITE FOR RESIDUE CD B 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4HX7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4HX7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HX7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HX7)

(-) Exons   (0, 0)

(no "Exon" information available for 4HX7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:128
                                                                                                                                                                
               SCOP domains d4hx7a1 A:4-62 automated matches                      d4hx7a2 A:63-136 automated matches                                         SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhh..ee..eehhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hx7 A   4 PSMEDYIKQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIGLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQKK 136
                                    13        23        33        43        53|       68        78        88        98       108       118       128        
                                                                            53|                                                                             
                                                                             59                                                                             


Chain B from PDB  Type:PROTEIN  Length:130
                                                                                                                                                                  
               SCOP domains d4hx7b1 B:3-62 automated matches                        d4hx7b2 B:63-136 automated matches                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhh..ee...eehhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hx7 B   3 TPSMEDYIKQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYGLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQKK 136
                                    12        22        32        42        52 ||     66        76        86        96       106       116       126       136
                                                                              54|                                                                             
                                                                               59
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 4)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HX7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HX7)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)

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  4hx7
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  MNTR_BACSU | P54512
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MNTR_BACSU | P54512: 1on1 1on2 2ev0 2ev5 2ev6 2f5c 2f5d 2f5e 2f5f 2hyf 2hyg 3r60 3r61 4hv5 4hv6 4hx4 4hx8

(-) Related Entries Specified in the PDB File

2f5d 4hv6 4hx4 4hxd