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(-) Description

Title :  BOVINE BETA-LACTOGLOBULIN COMPLEX WITH DODECYL SULFATE
 
Authors :  G. Gutierrez-Magdaleno, A. Torres-Rivera, E. Garcia-Hernandez, A. R Romero
Date :  17 Aug 12  (Deposition) - 13 Feb 13  (Release) - 13 Feb 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.64
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Beta Protein, Lipocalin, Milk Protein, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Gutierrez-Magdaleno, M. Bello, M. C. Portillo-Tellez, A. Rodriguez-Romero, E. Garcia-Hernandez
Ligand-Binding And Self-Association Cooperativity Of Beta-Lactoglobulin
J. Mol. Recognit. V. 26 67 2013
PubMed-ID: 23334914  |  Reference-DOI: 10.1002/JMR.2249

(-) Compounds

Molecule 1 - BETA-LACTOGLOBULIN
    Chains: A
    Organism Common: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: BETA-LG

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2SDS1Ligand/IonDODECYL SULFATE
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2SDS2Ligand/IonDODECYL SULFATE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:54 , ILE A:56 , LYS A:60 , LYS A:69 , ILE A:71 , ILE A:84 , PHE A:105 , MET A:107 , HOH A:420BINDING SITE FOR RESIDUE SDS A 201
2AC2SOFTWAREGLN A:5 , GLU A:45 , HOH A:326 , HOH A:344 , HOH A:385 , HOH A:389BINDING SITE FOR RESIDUE GOL A 202

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1A:66 -A:160
2A:106 -A:119

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4GNY)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4GNY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4GNY)

(-) Exons   (0, 0)

(no "Exon" information available for 4GNY)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:157
                                                                                                                                                                                             
               SCOP domains d4gnya_ A: beta-Lactoglobulin                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhee.eeeeeee.hhhhh........eeeeeeee.....eeeeeeeee..eeeeeeeeeee.....eeee......eeeeeee....eeeeeee....eeeeeee.....hhhhhhhhhhhhh.....eeee.hhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gny A   2 IVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI 162
                                    11        21        31        41        51        61        71        81        91       101       115       125       135       145       155       
                                                                                                                                      110|                                               
                                                                                                                                       115
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4GNY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4GNY)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        LACB_BOVIN | P02754: 1b0o 1b8e 1beb 1bso 1bsq 1bsy 1cj5 1dv9 1gx8 1gx9 1gxa 1qg5 1uz2 1yup 2akq 2blg 2gj5 2q2m 2q2p 2q39 2r56 3blg 3kza 3npo 3nq3 3nq9 3ph5 3ph6 3ueu 3uev 3uew 3uex 4dq3 4dq4 4ib6 4ib7 4ib8 4ib9 4iba 4kii 4lzu 4lzv 4y0p 4y0q 4y0r 5eee 5htd 5hte 5io5 5io7 5k06 5lke 5lkf

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4GNY)