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(-) Description

Title :  CRYSTAL STRUCTURE OF THE HUMAN KLHL3 KELCH DOMAIN IN COMPLEX WITH A WNK4 PEPTIDE
 
Authors :  F. J. Sorrell, F. R. Schumacher, T. Kurz, D. R. Alessi, J. Newman, S. Goub R. Chalk, J. Kopec, C. Tallant, E. Williams, T. Krojer, F. Von Delft, C. H. Arrowsmith, A. M. Edwards, C. Bountra, A. Bullock
Date :  29 Nov 13  (Deposition) - 08 Jan 14  (Release) - 28 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.84
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  B,D  (1x)
Biol. Unit 2:  A,C  (1x)
Keywords :  Signaling Protein-Transferase Complex, Klhl3, Ubiquitin, Adaptor Protein, Protein-Binding, Kelch Repeat, Wnk Signalling Pathway (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  F. Schumacher, F. J. Sorrell, D. R. Alessi, A. N. Bullock, T. Kurz
Structural And Biochemical Characterisation Of The Klhl3- Wnk Kinase Interaction Important In Blood Pressure Regulation.
Biochem. J. V. 460 237 2014
PubMed-ID: 24641320  |  Reference-DOI: 10.1042/BJ20140153

(-) Compounds

Molecule 1 - KELCH-LIKE PROTEIN 3
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPNIC28-BSA4
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System VariantR3 PRARE2
    Expression System Vector TypePLASMID
    FragmentKELCH DOMAIN, RESIDUES 298-587
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
 
Molecule 2 - SERINE/THREONINE-PROTEIN KINASE WNK4
    ChainsC, D
    EC Number2.7.11.1
    FragmentRESIDUES 557-567
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymPROTEIN KINASE LYSINE-DEFICIENT 4, PROTEIN KINASE WITH NO LYSINE 4
    SyntheticYES

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x) B D
Biological Unit 2 (1x)A C 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 7)

Asymmetric Unit (3, 7)
No.NameCountTypeFull Name
1CL2Ligand/IonCHLORIDE ION
2EDO2Ligand/Ion1,2-ETHANEDIOL
3SO43Ligand/IonSULFATE ION
Biological Unit 1 (2, 3)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2EDO1Ligand/Ion1,2-ETHANEDIOL
3SO42Ligand/IonSULFATE ION
Biological Unit 2 (2, 2)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2EDO1Ligand/Ion1,2-ETHANEDIOL
3SO41Ligand/IonSULFATE ION

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:362 , ARG A:383 , HOH A:2297BINDING SITE FOR RESIDUE SO4 A1586
2AC2SOFTWARESER A:433 , SER A:481 , HIS A:498 , ARG A:528 , ASN A:529 , TYR A:577 , ASP C:564BINDING SITE FOR RESIDUE EDO A1587
3AC3SOFTWAREARG A:339 , ARG A:360 , SER A:385 , HOH A:2083BINDING SITE FOR RESIDUE CL A1588
4AC4SOFTWAREARG B:362 , ARG B:383BINDING SITE FOR RESIDUE SO4 B1586
5AC5SOFTWARELYS A:417 , SER B:335 , ARG B:337 , ASN B:356 , HOH B:2038 , HOH B:2260BINDING SITE FOR RESIDUE SO4 B1587
6AC6SOFTWAREARG B:337 , ALA B:351 , GLY B:353 , VAL B:361 , THR B:363 , ASP B:365 , HOH B:2037BINDING SITE FOR RESIDUE EDO B1588
7AC7SOFTWAREARG B:339 , ARG B:360 , SER B:385 , HOH B:2087BINDING SITE FOR RESIDUE CL B1589

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1A:526 -B:549
2A:549 -B:526

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ala A:310 -Pro A:311
2Ala B:310 -Pro B:311

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (29, 58)

Asymmetric Unit (29, 58)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_067506Q309RKLHL3_HUMANDisease (PHA2D)199469627A/BQ309R
02UniProtVAR_067507F322CKLHL3_HUMANDisease (PHA2D)199469639A/BF322C
03UniProtVAR_067508R336IKLHL3_HUMANDisease (PHA2D)199469640A/BR336I
04UniProtVAR_067509A340VKLHL3_HUMANDisease (PHA2D)199469628A/BA340V
05UniProtVAR_067510V361MKLHL3_HUMANDisease (PHA2D)  ---A/BV361M
06UniProtVAR_067511R362WKLHL3_HUMANDisease (PHA2D)200892557A/BR362W
07UniProtVAR_067512R384QKLHL3_HUMANDisease (PHA2D)199469629A/BR384Q
08UniProtVAR_067513R384WKLHL3_HUMANDisease (PHA2D)  ---A/BR384W
09UniProtVAR_067514L387PKLHL3_HUMANDisease (PHA2D)199469630A/BL387P
10UniProtVAR_067515A398VKLHL3_HUMANDisease (PHA2D)387907155A/BA398V
11UniProtVAR_067516S410LKLHL3_HUMANDisease (PHA2D)199469641A/BS410L
12UniProtVAR_067517P426LKLHL3_HUMANDisease (PHA2D)387907156A/BP426L
13UniProtVAR_067518M427TKLHL3_HUMANDisease (PHA2D)199469642A/BM427T
14UniProtVAR_067519R431QKLHL3_HUMANDisease (PHA2D)199469643A/BR431Q
15UniProtVAR_067520S432NKLHL3_HUMANDisease (PHA2D)199469631A/BS432N
16UniProtVAR_067521S433GKLHL3_HUMANDisease (PHA2D)  ---A/BS433G
17UniProtVAR_067522S433NKLHL3_HUMANDisease (PHA2D)199469632A/BS433N
18UniProtVAR_067523V438IKLHL3_HUMANUnclassified  ---A/BV438I
19UniProtVAR_067524A494TKLHL3_HUMANDisease (PHA2D)199469633A/BA494T
20UniProtVAR_067525G500VKLHL3_HUMANDisease (PHA2D)746774345A/BG500V
21UniProtVAR_067526P501TKLHL3_HUMANDisease (PHA2D)199469634A/BP501T
22UniProtVAR_067527R528CKLHL3_HUMANDisease (PHA2D)199469635A/BR528C
23UniProtVAR_067528R528HKLHL3_HUMANDisease (PHA2D)199469636A/BR528H
24UniProtVAR_067529N529KKLHL3_HUMANDisease (PHA2D)  ---A/BN529K
25UniProtVAR_067530Y557CKLHL3_HUMANDisease (PHA2D)199469645A/BY557C
26UniProtVAR_017588E562KWNK4_HUMANDisease (PHA2B)137853093C/DE562K
27UniProtVAR_017589D564AWNK4_HUMANDisease (PHA2B)137853094C/DD564A
28UniProtVAR_017590Q565EWNK4_HUMANDisease (PHA2B)137853092C/DQ565E
29UniProtVAR_067531R575WKLHL3_HUMANDisease (PHA2D)199469646A/BR575W

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (29, 29)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_067506Q309RKLHL3_HUMANDisease (PHA2D)199469627BQ309R
02UniProtVAR_067507F322CKLHL3_HUMANDisease (PHA2D)199469639BF322C
03UniProtVAR_067508R336IKLHL3_HUMANDisease (PHA2D)199469640BR336I
04UniProtVAR_067509A340VKLHL3_HUMANDisease (PHA2D)199469628BA340V
05UniProtVAR_067510V361MKLHL3_HUMANDisease (PHA2D)  ---BV361M
06UniProtVAR_067511R362WKLHL3_HUMANDisease (PHA2D)200892557BR362W
07UniProtVAR_067512R384QKLHL3_HUMANDisease (PHA2D)199469629BR384Q
08UniProtVAR_067513R384WKLHL3_HUMANDisease (PHA2D)  ---BR384W
09UniProtVAR_067514L387PKLHL3_HUMANDisease (PHA2D)199469630BL387P
10UniProtVAR_067515A398VKLHL3_HUMANDisease (PHA2D)387907155BA398V
11UniProtVAR_067516S410LKLHL3_HUMANDisease (PHA2D)199469641BS410L
12UniProtVAR_067517P426LKLHL3_HUMANDisease (PHA2D)387907156BP426L
13UniProtVAR_067518M427TKLHL3_HUMANDisease (PHA2D)199469642BM427T
14UniProtVAR_067519R431QKLHL3_HUMANDisease (PHA2D)199469643BR431Q
15UniProtVAR_067520S432NKLHL3_HUMANDisease (PHA2D)199469631BS432N
16UniProtVAR_067521S433GKLHL3_HUMANDisease (PHA2D)  ---BS433G
17UniProtVAR_067522S433NKLHL3_HUMANDisease (PHA2D)199469632BS433N
18UniProtVAR_067523V438IKLHL3_HUMANUnclassified  ---BV438I
19UniProtVAR_067524A494TKLHL3_HUMANDisease (PHA2D)199469633BA494T
20UniProtVAR_067525G500VKLHL3_HUMANDisease (PHA2D)746774345BG500V
21UniProtVAR_067526P501TKLHL3_HUMANDisease (PHA2D)199469634BP501T
22UniProtVAR_067527R528CKLHL3_HUMANDisease (PHA2D)199469635BR528C
23UniProtVAR_067528R528HKLHL3_HUMANDisease (PHA2D)199469636BR528H
24UniProtVAR_067529N529KKLHL3_HUMANDisease (PHA2D)  ---BN529K
25UniProtVAR_067530Y557CKLHL3_HUMANDisease (PHA2D)199469645BY557C
26UniProtVAR_017588E562KWNK4_HUMANDisease (PHA2B)137853093DE562K
27UniProtVAR_017589D564AWNK4_HUMANDisease (PHA2B)137853094DD564A
28UniProtVAR_017590Q565EWNK4_HUMANDisease (PHA2B)137853092DQ565E
29UniProtVAR_067531R575WKLHL3_HUMANDisease (PHA2D)199469646BR575W

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (29, 29)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_067506Q309RKLHL3_HUMANDisease (PHA2D)199469627AQ309R
02UniProtVAR_067507F322CKLHL3_HUMANDisease (PHA2D)199469639AF322C
03UniProtVAR_067508R336IKLHL3_HUMANDisease (PHA2D)199469640AR336I
04UniProtVAR_067509A340VKLHL3_HUMANDisease (PHA2D)199469628AA340V
05UniProtVAR_067510V361MKLHL3_HUMANDisease (PHA2D)  ---AV361M
06UniProtVAR_067511R362WKLHL3_HUMANDisease (PHA2D)200892557AR362W
07UniProtVAR_067512R384QKLHL3_HUMANDisease (PHA2D)199469629AR384Q
08UniProtVAR_067513R384WKLHL3_HUMANDisease (PHA2D)  ---AR384W
09UniProtVAR_067514L387PKLHL3_HUMANDisease (PHA2D)199469630AL387P
10UniProtVAR_067515A398VKLHL3_HUMANDisease (PHA2D)387907155AA398V
11UniProtVAR_067516S410LKLHL3_HUMANDisease (PHA2D)199469641AS410L
12UniProtVAR_067517P426LKLHL3_HUMANDisease (PHA2D)387907156AP426L
13UniProtVAR_067518M427TKLHL3_HUMANDisease (PHA2D)199469642AM427T
14UniProtVAR_067519R431QKLHL3_HUMANDisease (PHA2D)199469643AR431Q
15UniProtVAR_067520S432NKLHL3_HUMANDisease (PHA2D)199469631AS432N
16UniProtVAR_067521S433GKLHL3_HUMANDisease (PHA2D)  ---AS433G
17UniProtVAR_067522S433NKLHL3_HUMANDisease (PHA2D)199469632AS433N
18UniProtVAR_067523V438IKLHL3_HUMANUnclassified  ---AV438I
19UniProtVAR_067524A494TKLHL3_HUMANDisease (PHA2D)199469633AA494T
20UniProtVAR_067525G500VKLHL3_HUMANDisease (PHA2D)746774345AG500V
21UniProtVAR_067526P501TKLHL3_HUMANDisease (PHA2D)199469634AP501T
22UniProtVAR_067527R528CKLHL3_HUMANDisease (PHA2D)199469635AR528C
23UniProtVAR_067528R528HKLHL3_HUMANDisease (PHA2D)199469636AR528H
24UniProtVAR_067529N529KKLHL3_HUMANDisease (PHA2D)  ---AN529K
25UniProtVAR_067530Y557CKLHL3_HUMANDisease (PHA2D)199469645AY557C
26UniProtVAR_017588E562KWNK4_HUMANDisease (PHA2B)137853093CE562K
27UniProtVAR_017589D564AWNK4_HUMANDisease (PHA2B)137853094CD564A
28UniProtVAR_017590Q565EWNK4_HUMANDisease (PHA2B)137853092CQ565E
29UniProtVAR_067531R575WKLHL3_HUMANDisease (PHA2D)199469646AR575W

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4CH9)

(-) Exons   (1, 2)

Asymmetric Unit (1, 2)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000002469141ENSE00001216260chr17:40932696-40933334639WNK4_HUMAN1-2062060--
1.2ENST000002469142ENSE00000865417chr17:40934776-40934948173WNK4_HUMAN207-264580--
1.3bENST000002469143bENSE00000947955chr17:40935955-40936175221WNK4_HUMAN264-338750--
1.4ENST000002469144ENSE00000947956chr17:40936440-40936597158WNK4_HUMAN338-390530--
1.5ENST000002469145ENSE00000947957chr17:40937115-4093720389WNK4_HUMAN391-420300--
1.6ENST000002469146ENSE00000947958chr17:40937284-40937500217WNK4_HUMAN420-492730--
1.7ENST000002469147ENSE00000947959chr17:40939296-40939560265WNK4_HUMAN493-581892C:557-565
D:557-565
9
9
1.8ENST000002469148ENSE00000947960chr17:40939796-40939917122WNK4_HUMAN581-621410--
1.9ENST000002469149ENSE00000947961chr17:40940148-4094020659WNK4_HUMAN622-641200--
1.10ENST0000024691410ENSE00000947962chr17:40940308-40940425118WNK4_HUMAN641-680400--
1.11ENST0000024691411ENSE00000947963chr17:40940699-40940815117WNK4_HUMAN681-719390--
1.12ENST0000024691412ENSE00000947964chr17:40945610-40945747138WNK4_HUMAN720-765460--
1.13ENST0000024691413ENSE00000947965chr17:40946632-4094668655WNK4_HUMAN766-784190--
1.14bENST0000024691414bENSE00001380389chr17:40946790-40947400611WNK4_HUMAN784-9872040--
1.15ENST0000024691415ENSE00000947967chr17:40947479-4094753961WNK4_HUMAN988-1008210--
1.16bENST0000024691416bENSE00000947968chr17:40947643-40948051409WNK4_HUMAN1008-11441370--
1.17bENST0000024691417bENSE00001376713chr17:40948141-40948340200WNK4_HUMAN1144-1211680--
1.18ENST0000024691418ENSE00000947970chr17:40948499-4094859698WNK4_HUMAN1211-1243330--
1.19ENST0000024691419ENSE00000947971chr17:40948704-40949061358WNK4_HUMAN1244-124410--

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:286
 aligned with KLHL3_HUMAN | Q9UH77 from UniProtKB/Swiss-Prot  Length:587

    Alignment length:286
                                   309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579      
          KLHL3_HUMAN   300 PKVMIVVGGQAPKAIRSVECYDFEEDRWDQIAELPSRRCRAGVVFMAGHVYAVGGFNGSLRVRTVDVYDGVKDQWTSIASMQERRSTLGAAVLNDLLYAVGGFDGSTGLASVEAYSYKTNEWFFVAPMNTRRSSVGVGVVEGKLYAVGGYDGASRQCLSTVEQYNPATNEWIYVADMSTRRSGAGVGVLSGQLYATGGHDGPLVRKSVEVYDPGTNTWKQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPVTDKWTLLPTNMSTGRSYAGVAVIHK 585
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..........eeeee....eeeee..........eeeee..eeeeeeee....eeeeeeeee....eeee...........eeeee..eeeee...........eeeee....eeeee..........eeeee..eeeee..ee....ee...eeeee....eeee...........eeeee..eeeee..ee..ee...eeee......eeee..........eeeee..eeeee...........eeeee....eeee............eeeeee. Sec.struct. author
             SAPs(SNPs) (1) ---------R------------C-------------I---V--------------------MW---------------------Q--P----------V-----------L---------------LT---QNG----I-------------------------------------------------------T-----VT--------------------------CK---------------------------C-----------------W---------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------W------------------------------------------------N----------------------------------------------------------------------------------------------H--------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ch9 A 300 PKVMIVVGGQAPKAIRSVECYDFEEDRWDQIAELPSRRCRAGVVFMAGHVYAVGGFNGSLRVRTVDVYDGVKDQWTSIASMQERRSTLGAAVLNDLLYAVGGFDGSTGLASVEAYSYKTNEWFFVAPMNTRRSSVGVGVVEGKLYAVGGYDGASRQCLSTVEQYNPATNEWIYVADMSTRRSGAGVGVLSGQLYATGGHDGPLVRKSVEVYDPGTNTWKQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPVTDKWTLLPTNMSTGRSYAGVAVIHK 585
                                   309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579      

Chain B from PDB  Type:PROTEIN  Length:286
 aligned with KLHL3_HUMAN | Q9UH77 from UniProtKB/Swiss-Prot  Length:587

    Alignment length:286
                                   309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579      
          KLHL3_HUMAN   300 PKVMIVVGGQAPKAIRSVECYDFEEDRWDQIAELPSRRCRAGVVFMAGHVYAVGGFNGSLRVRTVDVYDGVKDQWTSIASMQERRSTLGAAVLNDLLYAVGGFDGSTGLASVEAYSYKTNEWFFVAPMNTRRSSVGVGVVEGKLYAVGGYDGASRQCLSTVEQYNPATNEWIYVADMSTRRSGAGVGVLSGQLYATGGHDGPLVRKSVEVYDPGTNTWKQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPVTDKWTLLPTNMSTGRSYAGVAVIHK 585
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..........eeeee....eeeee..........eeeee..eeeee...........eeeee....eeeee..........eeeee..eeeee...........eeeee....eeeee..........eeeee..eeeee..ee....ee...eeeee....eeee...........eeeee..eeeee..ee..ee...eeee......eeee..........eeeee..eeeee...........eeeee....eeee............eeeeee. Sec.struct. author
             SAPs(SNPs) (1) ---------R------------C-------------I---V--------------------MW---------------------Q--P----------V-----------L---------------LT---QNG----I-------------------------------------------------------T-----VT--------------------------CK---------------------------C-----------------W---------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------W------------------------------------------------N----------------------------------------------------------------------------------------------H--------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ch9 B 300 PKVMIVVGGQAPKAIRSVECYDFEEDRWDQIAELPSRRCRAGVVFMAGHVYAVGGFNGSLRVRTVDVYDGVKDQWTSIASMQERRSTLGAAVLNDLLYAVGGFDGSTGLASVEAYSYKTNEWFFVAPMNTRRSSVGVGVVEGKLYAVGGYDGASRQCLSTVEQYNPATNEWIYVADMSTRRSGAGVGVLSGQLYATGGHDGPLVRKSVEVYDPGTNTWKQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPVTDKWTLLPTNMSTGRSYAGVAVIHK 585
                                   309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579      

Chain C from PDB  Type:PROTEIN  Length:9
 aligned with WNK4_HUMAN | Q96J92 from UniProtKB/Swiss-Prot  Length:1243

    Alignment length:9
           WNK4_HUMAN   557 EPEEPEADQ 565
               SCOP domains --------- SCOP domains
               CATH domains --------- CATH domains
               Pfam domains --------- Pfam domains
         Sec.struct. author ....hhhhh Sec.struct. author
                 SAPs(SNPs) -----K-AE SAPs(SNPs)
                    PROSITE --------- PROSITE
               Transcript 1 Exon 1.7  Transcript 1
                 4ch9 C 557 EPEEPEADQ 565

Chain D from PDB  Type:PROTEIN  Length:9
 aligned with WNK4_HUMAN | Q96J92 from UniProtKB/Swiss-Prot  Length:1243

    Alignment length:9
           WNK4_HUMAN   557 EPEEPEADQ 565
               SCOP domains --------- SCOP domains
               CATH domains --------- CATH domains
               Pfam domains --------- Pfam domains
         Sec.struct. author ....hhhhh Sec.struct. author
                 SAPs(SNPs) -----K-AE SAPs(SNPs)
                    PROSITE --------- PROSITE
               Transcript 1 Exon 1.7  Transcript 1
                 4ch9 D 557 EPEEPEADQ 565

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4CH9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4CH9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4CH9)

(-) Gene Ontology  (33, 39)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (KLHL3_HUMAN | Q9UH77)
molecular function
    GO:0003779    actin binding    Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0005198    structural molecule activity    The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell.
    GO:0004842    ubiquitin-protein transferase activity    Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
biological process
    GO:0072156    distal tubule morphogenesis    The process in which the anatomical structures of a distal tubule are generated and organized. The distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.
    GO:0050801    ion homeostasis    Any process involved in the maintenance of an internal steady state of ions within an organism or cell.
    GO:0070936    protein K48-linked ubiquitination    A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.
    GO:0016567    protein ubiquitination    The process in which one or more ubiquitin groups are added to a protein.
    GO:0042787    protein ubiquitination involved in ubiquitin-dependent protein catabolic process    The process in which a ubiquitin group, or multiple groups, are covalently attached to the target protein, thereby initiating the degradation of that protein.
    GO:0070294    renal sodium ion absorption    A renal system process in which sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.
cellular component
    GO:0031463    Cul3-RING ubiquitin ligase complex    A ubiquitin ligase complex in which a cullin from the Cul3 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a BTB-domain-containing protein.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain C,D   (WNK4_HUMAN | Q96J92)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0019869    chloride channel inhibitor activity    Stops, prevents, or reduces the activity of a chloride channel.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004672    protein kinase activity    Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
    GO:0004674    protein serine/threonine kinase activity    Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0006821    chloride transport    The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0072156    distal tubule morphogenesis    The process in which the anatomical structures of a distal tubule are generated and organized. The distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.
    GO:0035556    intracellular signal transduction    The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
    GO:0050801    ion homeostasis    Any process involved in the maintenance of an internal steady state of ions within an organism or cell.
    GO:0006811    ion transport    The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0090188    negative regulation of pancreatic juice secretion    Any process that decreases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0032414    positive regulation of ion transmembrane transporter activity    Any process that activates or increases the activity of an ion transporter.
    GO:0008104    protein localization    Any process in which a protein is transported to, or maintained in, a specific location.
    GO:0006468    protein phosphorylation    The process of introducing a phosphate group on to a protein.
    GO:0050794    regulation of cellular process    Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
    GO:2000021    regulation of ion homeostasis    Any process that modulates the frequency, rate or extent of ion homeostasis.
    GO:0070294    renal sodium ion absorption    A renal system process in which sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.
cellular component
    GO:0005923    bicellular tight junction    An occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet; the outer leaflets of the two interacting plasma membranes are seen to be tightly apposed where sealing strands are present. Each sealing strand is composed of a long row of transmembrane adhesion proteins embedded in each of the two interacting plasma membranes.
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        KLHL3_HUMAN | Q9UH774hxi 5nkp
        WNK4_HUMAN | Q96J922v3s 4chb

(-) Related Entries Specified in the PDB File

4chb CRYSTAL STRUCTURE OF THE HUMAN KLHL2 KELCH DOMAIN IN COMPLEX WITH A WNK4 PEPTIDE