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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN TRAP1 WITH BIIB-021
 
Authors :  C. Lee, H. K. Park, J. H. Ryu, B. H. Kang
Date :  27 Mar 15  (Deposition) - 22 Apr 15  (Release) - 22 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Mitochondrial Hsp90 (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Lee, H. K. Park, H. Jeong, J. Lim, A. J. Lee, K. Y. Cheon, C. S. Kim, A. P. Thomas, B. Bae, N. D. Kim, S. H. Kim, P. G. Suh, J. H. Ryu, B. H. Kang
Development Of A Mitochondria-Targeted Hsp90 Inhibitor Base On The Crystal Structures Of Human Trap1
J. Am. Chem. Soc. V. 137 4358 2015
PubMed-ID: 25785725  |  Reference-DOI: 10.1021/JA511893N

(-) Compounds

Molecule 1 - HEAT SHOCK PROTEIN 75 KDA, MITOCHONDRIAL
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 60-561
    Gene: TRAP1, HSP75
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: HSP 75,TNFR-ASSOCIATED PROTEIN 1,TUMOR NECROSIS FACTOR TYPE 1 RECEPTOR-ASSOCIATED PROTEIN,TRAP-1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
194M1Ligand/Ion6-CHLORO-9-[(4-METHOXY-3,5-DIMETHYLPYRIDIN-2-YL)METHYL]-9H-PURIN-2-AMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:123 , ASP A:158 , ILE A:161 , GLY A:162 , MET A:163 , LEU A:168 , GLY A:202 , PHE A:205 , THR A:251binding site for residue 94M A 601

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:501 -A:527

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4Z1G)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Z1G)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Z1G)

(-) Exons   (0, 0)

(no "Exon" information available for 4Z1G)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:430
                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........ee....eeee.hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeee....eeeeee.....hhhhhhh.hhhhhhhh.eeeeeeeee.......eeeeee....eeeeeeee....eeeeeeee...hhhhhhhhhhhhhhhhhh......eee..ee...............hhhhhhhhhhhhhh....eeeeeeeee.....eeeeeeee......eee....eee.......hhhhh..eeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh...eee.......eehhhhhh.........eee..hhhhhh.hhhhhhh.......eee.hhhhhhhhhhh.ee..ee...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4z1g A  69 EPLHSIISSTESVQGSTSKHEFQAETKKLLDIVARSLYSEKEVFIRELISNASDALEKLRHKLVSDGQALPEMEIHLQTNAEKGTITIQDTGIGMTQEELVSGVGFYSAFMVADRVEVYSRSAAPGSLGYQWLSDGSGVFEIAEASGVRTGTKIIIHLKSDCKEFSSEARVRDVVTKYSNFVSFPLYLNGRRMNTLQAIWMMDPKDVREWQHEEFYRYVAQAHDKPRYTLHYKTDAPLNIRSIFYVPDMKPSVALYSRKVLIQTKATDILPKWLRFIRGVVDSEDIPSALIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIAKLLRYESSALPSGQLTSLSEYASRMRARNIYYLCAPNRHLAEHSPYYEAMKKKDTEVLFCFEQFDELTLLHLREFDKKKLISVET 552
                                    78        88        98       108       118       128       138       148       158       168 ||    209       219       229       239       249       259       269       279       289       299       309       319       329       339       349||     370       380       390      |410       420       430       440       450       460       470       480       490 ||    502       512       522       532       542       552
                                                                                                                               170|                                                                                                                                                 350|                                397|                                                                                 492|                                                         
                                                                                                                                202                                                                                                                                                  362                                 408                                                                                  495
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Z1G)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Z1G)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Z1G)

(-) Gene Ontology  (22, 22)

Asymmetric/Biological Unit(hide GO term definitions)

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  4z1g
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  TRAP1_HUMAN | Q12931
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TRAP1_HUMAN | Q12931: 4z1f 4z1h 4z1i 5f3k 5f5r 5hph

(-) Related Entries Specified in the PDB File

4z1f 4z1h 4z1i