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(-) Description

Title :  ROCK 1 BOUND TO METHOXYPHENYL THIAZOLE INHIBITOR
 
Authors :  M. D. Jacobs
Date :  19 Mar 15  (Deposition) - 10 Jun 15  (Release) - 08 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.40
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Kinase, Dimer, Dimerization, Myosin, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. Green, J. Cao, U. K. Bandarage, H. Gao, J. Court, C. Marhefka, M. Jacobs, P. Taslimi, D. Newsome, T. Nakayama, S. Shah, S. Rodems
Design, Synthesis, And Structure-Activity Relationships Of Pyridine-Based Rho Kinase (Rock) Inhibitors.
J. Med. Chem. V. 58 5028 2015
PubMed-ID: 26039570  |  Reference-DOI: 10.1021/ACS.JMEDCHEM.5B00424
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - RHO-ASSOCIATED PROTEIN KINASE 1
    ChainsA, B
    EC Number2.7.11.1
    EngineeredYES
    Expression SystemSPODOPTERA FRUGIPERDA
    Expression System CommonFALL ARMYWORM
    Expression System PlasmidPBEV10
    Expression System Taxid7108
    Expression System Vector TypeBACULOVIRUS
    FragmentN-TERMINAL KINASE DOMAIN (UNP RESIDUES 6-415)
    GeneROCK1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymRENAL CARCINOMA ANTIGEN NY-REN-35, RHO-ASSOCIATED, COILED- COIL-CONTAINING PROTEIN KINASE 1, COILED-COIL-CONTAINING PROTEIN KINASE I, ROCK-I, P160 ROCK-1, P160ROCK

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
14KK2Ligand/Ion2-(3-METHOXYPHENYL)-N-[4-(PYRIDIN-4-YL)-1,3-THIAZOL-2-YL]ACETAMIDE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:82 , GLY A:85 , ALA A:86 , PHE A:87 , GLY A:88 , GLU A:89 , VAL A:90 , ALA A:103 , LYS A:105 , LEU A:107 , MET A:153 , GLU A:154 , MET A:156 , ALA A:215 , ASP A:216binding site for residue 4KK A 501
2AC2SOFTWAREGLY B:85 , ALA B:86 , PHE B:87 , GLY B:88 , GLU B:89 , VAL B:90 , ALA B:103 , LYS B:105 , LEU B:107 , MET B:153 , GLU B:154 , MET B:156 , ASP B:216binding site for residue 4KK B 501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4YVE)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4YVE)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4YVE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4YVE)

(-) Exons   (0, 0)

(no "Exon" information available for 4YVE)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:390
                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeeeeeee...eeeeeeee.....eeeeeeeehhhhhh.....hhhhhhhhhhhh.......eeeeee...eeeeee.....eehhhhhh....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee.hhhhhee.....eee...........hhhhhhh.eeehhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh........hhhhhhhhhhhh.hhhhh....hhhhhhhhhhhh....hhhhhhhh.................................hhhhh.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4yve A   6 SFETRFEKMDNLLRDPKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEETFPIPKAFVGNQLPFVGFTYYSNRRY 405
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245  ||   259       269       279       289       299       309       319       329       339       349       359       369  ||   385       395       405
                                                                                                                                                                                                                                                                            248|                                                                                                                    372|                          
                                                                                                                                                                                                                                                                             253                                                                                                                     379                          

Chain B from PDB  Type:PROTEIN  Length:393
                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeeeeeeee..eeeeeeee.....eeeeeeeehhhhhhh....hhhhhhhhhhhh.......eeeeee...eeeeee.....eehhhhhh....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee.....eee......hhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh........hhhhhhhhhhhh.hhhhh....hhhhhhhhhhhh....hhhhhhhh..................................hhhhh...ee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4yve B   5 MSFETRFEKMDNLLRDPKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEETFPIPKAFVGNQLPFVGFTYYSN 402
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364      |379       389       399   
                                                                                                                                                                                                                                                                                                                                                                                                        371|                         
                                                                                                                                                                                                                                                                                                                                                                                                         377                         

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4YVE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4YVE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4YVE)

(-) Gene Ontology  (59, 59)

Asymmetric/Biological Unit(hide GO term definitions)

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  ROCK1_HUMAN | Q13464
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ROCK1_HUMAN | Q134641s1c 2esm 2etk 2etr 2v55 3d9v 3ncz 3ndm 3o0z 3tv7 3twj 3v8s 4l2w 4w7p 4yvc 5bml 5f5p 5hvu 5kks 5kkt

(-) Related Entries Specified in the PDB File

4yvc